RNA–Protein interactions for RNA: ENST00000467141.1

MSL3-209, Transcript of MSL complex subunit 3, humanhuman

TSL 3

Gene MSL3, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-209ENST00000467141 PSMG3-AS1Q96PY0 264 aa7.87□□□□□ -1.15
MSL3-209ENST00000467141 TSKSQ9UJT2 592 aa7.87□□□□□ -1.15
MSL3-209ENST00000467141 ECM2O94769 699 aaPredicted RBP7.86□□□□□ -1.15
MSL3-209ENST00000467141 KRTAP1-3Q8IUG1 177 aa7.86□□□□□ -1.15
MSL3-209ENST00000467141 SMCPP49901 116 aaPredicted RBP7.85□□□□□ -1.15
MSL3-209ENST00000467141 TMEM151AQ8N4L1 468 aa7.85□□□□□ -1.15
MSL3-209ENST00000467141 PKD2L1Q9P0L9 805 aa7.85□□□□□ -1.15
MSL3-209ENST00000467141 ATP13A2Q9NQ11 1180 aa7.84□□□□□ -1.15
MSL3-209ENST00000467141 SCRIBQ14160 1630 aa7.83□□□□□ -1.16
MSL3-209ENST00000467141 HDGFP51858 240 aaKnown RBP7.83□□□□□ -1.16
MSL3-209ENST00000467141 IRF7Q92985 503 aa7.83□□□□□ -1.16
MSL3-209ENST00000467141 TRIM47Q96LD4 638 aa7.83□□□□□ -1.16
MSL3-209ENST00000467141 SENP2Q9HC62 589 aa7.83□□□□□ -1.16
MSL3-209ENST00000467141 GDF11O95390 407 aa7.82□□□□□ -1.16
MSL3-209ENST00000467141 GSK3AP49840 483 aa7.82□□□□□ -1.16
MSL3-209ENST00000467141 RBM33Q96EV2 1170 aaKnown RBP7.82□□□□□ -1.16
MSL3-209ENST00000467141 CRISPLD2Q9H0B8 497 aa7.81□□□□□ -1.16
MSL3-209ENST00000467141 PKD2Q13563 968 aa7.8□□□□□ -1.16
MSL3-209ENST00000467141 LMOD2Q6P5Q4 547 aa7.8□□□□□ -1.16
MSL3-209ENST00000467141 CYP4X1Q8N118 509 aa7.8□□□□□ -1.16
MSL3-209ENST00000467141 TOR4AQ9NXH8 423 aa7.8□□□□□ -1.16
MSL3-209ENST00000467141 NXF1Q9UBU9 619 aaKnown RBP7.8□□□□□ -1.16
MSL3-209ENST00000467141 S1PR4O95977 384 aa7.79□□□□□ -1.16
MSL3-209ENST00000467141 EPAS1Q99814 870 aa7.78□□□□□ -1.16
MSL3-209ENST00000467141 SHROOM4Q9ULL8 1493 aa7.77□□□□□ -1.17
MSL3-209ENST00000467141 TLL1O43897 1013 aa7.76□□□□□ -1.17
MSL3-209ENST00000467141 VEGFBP49765 207 aa7.76□□□□□ -1.17
MSL3-209ENST00000467141 RASSF7Q02833 373 aa7.76□□□□□ -1.17
MSL3-209ENST00000467141 RGL2O15211 777 aa7.75□□□□□ -1.17
MSL3-209ENST00000467141 PLA2G2CQ5R387 149 aa7.75□□□□□ -1.17
MSL3-209ENST00000467141 NECTIN2Q92692 538 aa7.75□□□□□ -1.17
MSL3-209ENST00000467141 KIFC2Q96AC6 838 aa7.74□□□□□ -1.17
MSL3-209ENST00000467141 PCDHB3Q9Y5E6 796 aa7.74□□□□□ -1.17
MSL3-209ENST00000467141 GPAT2Q6NUI2 795 aa7.73□□□□□ -1.17
MSL3-209ENST00000467141 BLOC1S3Q6QNY0 202 aa7.73□□□□□ -1.17
MSL3-209ENST00000467141 PNMA3Q9UL41 463 aa7.73□□□□□ -1.17
MSL3-209ENST00000467141 PDE4AP27815 886 aa7.72□□□□□ -1.17
MSL3-209ENST00000467141 TATDN2Q93075 761 aa7.72□□□□□ -1.17
MSL3-209ENST00000467141 TTC24A2A3L6 582 aaPredicted RBP7.71□□□□□ -1.18
MSL3-209ENST00000467141 C3orf80F5H4A9 247 aa7.71□□□□□ -1.18
MSL3-209ENST00000467141 CC2D2AQ9P2K1 1620 aa7.7□□□□□ -1.18
MSL3-209ENST00000467141 CDCA7LQ96GN5 454 aa7.7□□□□□ -1.18
MSL3-209ENST00000467141 EIF4G1Q04637 1599 aaKnown RBP7.7□□□□□ -1.18
MSL3-209ENST00000467141 ERBB4Q15303 1308 aa7.7□□□□□ -1.18
MSL3-209ENST00000467141 EMILIN3Q9NT22 766 aa7.69□□□□□ -1.18
MSL3-209ENST00000467141 FAM198AQ9UFP1 575 aa7.69□□□□□ -1.18
MSL3-209ENST00000467141 NBPF26B4DH59 902 aa7.68□□□□□ -1.18
MSL3-209ENST00000467141 NPAS3Q8IXF0 933 aa7.68□□□□□ -1.18
MSL3-209ENST00000467141 NCKAP5LQ9HCH0 1330 aa7.68□□□□□ -1.18
MSL3-209ENST00000467141 TSR1Q2NL82 804 aaKnown RBP7.66□□□□□ -1.18
MSL3-209ENST00000467141 SLF2Q8IX21 1173 aa7.66□□□□□ -1.18
MSL3-209ENST00000467141 H3BM21 787 aa7.65□□□□□ -1.18
MSL3-209ENST00000467141 PRSS12P56730 875 aa7.65□□□□□ -1.18
MSL3-209ENST00000467141 LCE3BQ5TA77 95 aa7.65□□□□□ -1.18
MSL3-209ENST00000467141 LARP6Q9BRS8 491 aaKnown RBP7.65□□□□□ -1.18
MSL3-209ENST00000467141 IGHA1P01876 353 aa7.64□□□□□ -1.19
MSL3-209ENST00000467141 SWT1Q5T5J6 900 aaKnown RBP7.64□□□□□ -1.19
MSL3-209ENST00000467141 DDX27Q96GQ7 796 aaKnown RBP7.64□□□□□ -1.19
MSL3-209ENST00000467141 PRR14Q9BWN1 585 aa7.64□□□□□ -1.19
MSL3-209ENST00000467141 MAP3K7O43318 606 aa7.63□□□□□ -1.19
MSL3-209ENST00000467141 CD2BP2O95400 341 aaKnown RBP7.63□□□□□ -1.19
MSL3-209ENST00000467141 NUDT18Q6ZVK8 323 aa7.63□□□□□ -1.19
MSL3-209ENST00000467141 SLC6A16Q9GZN6 736 aa7.62□□□□□ -1.19
MSL3-209ENST00000467141 RNF225M0QZC1 329 aaPredicted RBP7.61□□□□□ -1.19
MSL3-209ENST00000467141 SMPD1P17405 629 aa7.61□□□□□ -1.19
MSL3-209ENST00000467141 DDX12PQ92771 950 aa7.61□□□□□ -1.19
MSL3-209ENST00000467141 ADH1BP00325 375 aa7.6□□□□□ -1.19
MSL3-209ENST00000467141 CHGAP10645 457 aaKnown RBP7.6□□□□□ -1.19
MSL3-209ENST00000467141 SLC4A3P48751 1232 aa7.6□□□□□ -1.19
MSL3-209ENST00000467141 CECR2Q9BXF3 1484 aa7.6□□□□□ -1.19
MSL3-209ENST00000467141 RPIAP49247 311 aa7.59□□□□□ -1.19
MSL3-209ENST00000467141 ADAM23O75077 832 aa7.58□□□□□ -1.2
MSL3-209ENST00000467141 EN1Q05925 392 aaPredicted RBP7.58□□□□□ -1.2
MSL3-209ENST00000467141 HS6ST3Q8IZP7 471 aa7.58□□□□□ -1.2
MSL3-209ENST00000467141 DNMT3AQ9Y6K1 912 aaPredicted RBP7.57□□□□□ -1.2
MSL3-209ENST00000467141 NBR1Q14596 966 aa7.55□□□□□ -1.2
MSL3-209ENST00000467141 SNIP1Q8TAD8 396 aaKnown RBP7.55□□□□□ -1.2
MSL3-209ENST00000467141 J3QL48 77 aa7.54□□□□□ -1.2
MSL3-209ENST00000467141 HPS1Q92902 700 aa7.54□□□□□ -1.2
MSL3-209ENST00000467141 BTBD11A6QL63 1104 aa7.53□□□□□ -1.2
MSL3-209ENST00000467141 ADAMTS8Q9UP79 889 aa7.53□□□□□ -1.2
MSL3-209ENST00000467141 CERKQ8TCT0 537 aa7.52□□□□□ -1.21
MSL3-209ENST00000467141 FOXK2Q01167 660 aa7.51□□□□□ -1.21
MSL3-209ENST00000467141 Q8N3U1 123 aa7.51□□□□□ -1.21
MSL3-209ENST00000467141 KRTAP9-9Q9BYP9 154 aa7.51□□□□□ -1.21
MSL3-209ENST00000467141 KRTAP9-4Q9BYQ2 154 aa7.51□□□□□ -1.21
MSL3-209ENST00000467141 SMARCA4P51532 1647 aa7.49□□□□□ -1.21
MSL3-209ENST00000467141 IRS1P35568 1242 aa7.49□□□□□ -1.21
MSL3-209ENST00000467141 MFSD10Q14728 455 aa7.48□□□□□ -1.21
MSL3-209ENST00000467141 AMER1Q5JTC6 1135 aaPredicted RBP7.48□□□□□ -1.21
MSL3-209ENST00000467141 RYDENQ9NUL5 291 aaKnown RBP7.48□□□□□ -1.21
MSL3-209ENST00000467141 KRTAP4-8A0A0G2JLE6 195 aa7.47□□□□□ -1.21
MSL3-209ENST00000467141 DPYSL4O14531 572 aa7.47□□□□□ -1.21
MSL3-209ENST00000467141 NR1I2O75469 434 aa7.47□□□□□ -1.21
MSL3-209ENST00000467141 DNAJC5Q9H3Z4 198 aa7.47□□□□□ -1.21
MSL3-209ENST00000467141 FCF1Q9Y324 198 aaKnown RBP7.47□□□□□ -1.21
MSL3-209ENST00000467141 NKX1-1Q15270 411 aaPredicted RBP7.46□□□□□ -1.22
MSL3-209ENST00000467141 WNT7AO00755 349 aa7.45□□□□□ -1.22
MSL3-209ENST00000467141 ACTN4O43707 911 aaKnown RBP7.45□□□□□ -1.22
MSL3-209ENST00000467141 BMP1P13497 986 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms