RNA–Protein interactions for RNA: ENST00000467065.1

UBXN4-205, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-205ENST00000467065 PIP4P2Q8N4L2 257 aa10.05□□□□□ -0.8
UBXN4-205ENST00000467065 KDM5AP29375 1690 aaKnown RBP10.05□□□□□ -0.8
UBXN4-205ENST00000467065 IQSEC2Q5JU85 1478 aa10.04□□□□□ -0.8
UBXN4-205ENST00000467065 E9PCH4 1651 aa10.04□□□□□ -0.8
UBXN4-205ENST00000467065 ANKRD50Q9ULJ7 1429 aa10.04□□□□□ -0.8
UBXN4-205ENST00000467065 NPHP4O75161 1426 aaPredicted RBP10.03□□□□□ -0.8
UBXN4-205ENST00000467065 IQGAP3Q86VI3 1631 aa10.03□□□□□ -0.8
UBXN4-205ENST00000467065 MED14O60244 1454 aa10.03□□□□□ -0.8
UBXN4-205ENST00000467065 THEMISQ8N1K5 641 aaPredicted RBP10.02□□□□□ -0.81
UBXN4-205ENST00000467065 ADGRB3O60242 1522 aa10.02□□□□□ -0.81
UBXN4-205ENST00000467065 SLIT1O75093 1534 aa10.02□□□□□ -0.81
UBXN4-205ENST00000467065 ANKLE2Q86XL3 938 aa10.01□□□□□ -0.81
UBXN4-205ENST00000467065 FOXD4L1Q9NU39 408 aa10.01□□□□□ -0.81
UBXN4-205ENST00000467065 SCAF11Q99590 1463 aaKnown RBP10.01□□□□□ -0.81
UBXN4-205ENST00000467065 CPS1P31327 1500 aa10.01□□□□□ -0.81
UBXN4-205ENST00000467065 XIRP1Q702N8 1843 aaKnown RBP10□□□□□ -0.81
UBXN4-205ENST00000467065 ARHGAP23Q9P227 1491 aa10□□□□□ -0.81
UBXN4-205ENST00000467065 ITGAEP38570 1179 aa10□□□□□ -0.81
UBXN4-205ENST00000467065 ROCK1Q13464 1354 aa10□□□□□ -0.81
UBXN4-205ENST00000467065 NOS1P29475 1434 aa9.99□□□□□ -0.81
UBXN4-205ENST00000467065 SPHKAPQ2M3C7 1700 aa9.99□□□□□ -0.81
UBXN4-205ENST00000467065 RPRD2Q5VT52 1461 aaKnown RBP9.98□□□□□ -0.81
UBXN4-205ENST00000467065 TMEM131LA2VDJ0 1609 aa9.97□□□□□ -0.81
UBXN4-205ENST00000467065 RRBP1Q9P2E9 1410 aaKnown RBP9.97□□□□□ -0.81
UBXN4-205ENST00000467065 SLC4A1APQ9BWU0 796 aaKnown RBP9.96□□□□□ -0.82
UBXN4-205ENST00000467065 UBAP1LF5GYI3 381 aa9.95□□□□□ -0.82
UBXN4-205ENST00000467065 PITPNM1O00562 1244 aa9.95□□□□□ -0.82
UBXN4-205ENST00000467065 LTKP29376 864 aa9.95□□□□□ -0.82
UBXN4-205ENST00000467065 FXR2P51116 673 aaKnown RBP eCLIP9.95□□□□□ -0.82
UBXN4-205ENST00000467065 IDI1Q13907 227 aa9.95□□□□□ -0.82
UBXN4-205ENST00000467065 STAG3Q9UJ98 1225 aa9.95□□□□□ -0.82
UBXN4-205ENST00000467065 TMEM2Q9UHN6 1383 aa9.95□□□□□ -0.82
UBXN4-205ENST00000467065 ALKQ9UM73 1620 aa9.95□□□□□ -0.82
UBXN4-205ENST00000467065 LRRC7Q96NW7 1537 aa9.94□□□□□ -0.82
UBXN4-205ENST00000467065 TXNDC2Q86VQ3 553 aa9.94□□□□□ -0.82
UBXN4-205ENST00000467065 CHD2O14647 1828 aaKnown RBP9.93□□□□□ -0.82
UBXN4-205ENST00000467065 NUP155O75694 1391 aa9.92□□□□□ -0.82
UBXN4-205ENST00000467065 KIF1BO60333 1816 aa9.92□□□□□ -0.82
UBXN4-205ENST00000467065 EID1Q9Y6B2 187 aa9.92□□□□□ -0.82
UBXN4-205ENST00000467065 ZFYVE9O95405 1425 aa9.91□□□□□ -0.82
UBXN4-205ENST00000467065 CLTCL1P53675 1640 aa9.91□□□□□ -0.82
UBXN4-205ENST00000467065 NWD1Q149M9 1564 aa9.91□□□□□ -0.82
UBXN4-205ENST00000467065 HAX1O00165 279 aa9.9□□□□□ -0.82
UBXN4-205ENST00000467065 SLC52A1Q9NWF4 448 aa9.9□□□□□ -0.82
UBXN4-205ENST00000467065 NAIPQ13075 1403 aa9.9□□□□□ -0.83
UBXN4-205ENST00000467065 RIMS2Q9UQ26 1411 aa9.9□□□□□ -0.83
UBXN4-205ENST00000467065 PIP4K2BP78356 416 aa9.89□□□□□ -0.83
UBXN4-205ENST00000467065 CHGAP10645 457 aaKnown RBP9.88□□□□□ -0.83
UBXN4-205ENST00000467065 TRPM2O94759 1503 aa9.87□□□□□ -0.83
UBXN4-205ENST00000467065 NRXN3Q9Y4C0 1643 aa9.87□□□□□ -0.83
UBXN4-205ENST00000467065 SLC26A8Q96RN1 970 aa9.87□□□□□ -0.83
UBXN4-205ENST00000467065 HFM1A2PYH4 1435 aa9.87□□□□□ -0.83
UBXN4-205ENST00000467065 DIP2AQ14689 1571 aa9.87□□□□□ -0.83
UBXN4-205ENST00000467065 DISP3Q9P2K9 1392 aa9.87□□□□□ -0.83
UBXN4-205ENST00000467065 NKTRP30414 1462 aaKnown RBP9.86□□□□□ -0.83
UBXN4-205ENST00000467065 TOM1O60784 492 aa9.86□□□□□ -0.83
UBXN4-205ENST00000467065 NUTM2DQ5VT03 806 aaPredicted RBP9.86□□□□□ -0.83
UBXN4-205ENST00000467065 PLEKHG1Q9ULL1 1385 aa9.86□□□□□ -0.83
UBXN4-205ENST00000467065 PPP1R15AO75807 674 aaPredicted RBP9.85□□□□□ -0.83
UBXN4-205ENST00000467065 HSPA1LP34931 641 aa9.85□□□□□ -0.83
UBXN4-205ENST00000467065 TRIM26Q12899 539 aaPredicted RBP9.85□□□□□ -0.83
UBXN4-205ENST00000467065 BCANQ96GW7 911 aa9.85□□□□□ -0.83
UBXN4-205ENST00000467065 ROBO1Q9Y6N7 1651 aa9.85□□□□□ -0.83
UBXN4-205ENST00000467065 MED1Q15648 1581 aaPredicted RBP9.84□□□□□ -0.83
UBXN4-205ENST00000467065 PPLO60437 1756 aa9.84□□□□□ -0.83
UBXN4-205ENST00000467065 TMEM94Q12767 1356 aa9.84□□□□□ -0.83
UBXN4-205ENST00000467065 ADAMTS13Q76LX8 1427 aa9.83□□□□□ -0.84
UBXN4-205ENST00000467065 NEXMIFQ5QGS0 1516 aa9.83□□□□□ -0.84
UBXN4-205ENST00000467065 XRN1Q8IZH2 1706 aaKnown RBP9.83□□□□□ -0.84
UBXN4-205ENST00000467065 RBM33Q96EV2 1170 aaKnown RBP9.83□□□□□ -0.84
UBXN4-205ENST00000467065 SETD1AO15047 1707 aaKnown RBP9.82□□□□□ -0.84
UBXN4-205ENST00000467065 KCNA6P17658 529 aa9.82□□□□□ -0.84
UBXN4-205ENST00000467065 EVX2Q03828 476 aa9.82□□□□□ -0.84
UBXN4-205ENST00000467065 TRIM52Q96A61 297 aa9.82□□□□□ -0.84
UBXN4-205ENST00000467065 SETBP1Q9Y6X0 1596 aa9.82□□□□□ -0.84
UBXN4-205ENST00000467065 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.82□□□□□ -0.84
UBXN4-205ENST00000467065 ZBTB22O15209 634 aa9.81□□□□□ -0.84
UBXN4-205ENST00000467065 PROSER2Q86WR7 435 aaPredicted RBP9.81□□□□□ -0.84
UBXN4-205ENST00000467065 IFT172Q9UG01 1749 aa9.81□□□□□ -0.84
UBXN4-205ENST00000467065 PHLPP1O60346 1717 aa9.8□□□□□ -0.84
UBXN4-205ENST00000467065 HDGFP51858 240 aaKnown RBP9.8□□□□□ -0.84
UBXN4-205ENST00000467065 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.8□□□□□ -0.84
UBXN4-205ENST00000467065 ZNF326Q5BKZ1 582 aaKnown RBP9.79□□□□□ -0.84
UBXN4-205ENST00000467065 ILDR2Q71H61 639 aa9.79□□□□□ -0.84
UBXN4-205ENST00000467065 ACIN1Q9UKV3 1341 aaKnown RBP9.79□□□□□ -0.84
UBXN4-205ENST00000467065 NALCNQ8IZF0 1738 aa9.79□□□□□ -0.84
UBXN4-205ENST00000467065 PTPRUQ92729 1446 aa9.78□□□□□ -0.84
UBXN4-205ENST00000467065 MSH6P52701 1360 aa9.77□□□□□ -0.84
UBXN4-205ENST00000467065 TBX22Q9Y458 520 aa9.77□□□□□ -0.85
UBXN4-205ENST00000467065 PIK3R4Q99570 1358 aa9.76□□□□□ -0.85
UBXN4-205ENST00000467065 SPDYE2BA6NHP3 402 aa9.76□□□□□ -0.85
UBXN4-205ENST00000467065 SPDYE6P0CI01 402 aa9.76□□□□□ -0.85
UBXN4-205ENST00000467065 ATXN8OSP0DMR3 200 aa9.76□□□□□ -0.85
UBXN4-205ENST00000467065 SPDYE2Q495Y8 402 aa9.76□□□□□ -0.85
UBXN4-205ENST00000467065 FAM135BQ49AJ0 1406 aa9.75□□□□□ -0.85
UBXN4-205ENST00000467065 COL16A1Q07092 1604 aaPredicted RBP9.74□□□□□ -0.85
UBXN4-205ENST00000467065 METP08581 1390 aa9.74□□□□□ -0.85
UBXN4-205ENST00000467065 C14orf37Q86TY3 774 aa9.73□□□□□ -0.85
UBXN4-205ENST00000467065 PCGF6Q9BYE7 350 aa9.73□□□□□ -0.85
UBXN4-205ENST00000467065 AMOTL2Q9Y2J4 779 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms