RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 ATF3P18847 181 aa20.85■□□□□ 0.93
UBR4-210ENST00000466969 TET3O43151 1660 aa20.85■□□□□ 0.93
UBR4-210ENST00000466969 CCDC141Q6ZP82 1450 aa20.81■□□□□ 0.92
UBR4-210ENST00000466969 NCOA3Q9Y6Q9 1424 aa20.81■□□□□ 0.92
UBR4-210ENST00000466969 TRPC5Q9UL62 973 aaPredicted RBP20.81■□□□□ 0.92
UBR4-210ENST00000466969 CAMSAP2Q08AD1 1489 aa20.81■□□□□ 0.92
UBR4-210ENST00000466969 BRINP3Q76B58 766 aa20.8■□□□□ 0.92
UBR4-210ENST00000466969 LRRC59Q96AG4 307 aaKnown RBP20.8■□□□□ 0.92
UBR4-210ENST00000466969 RSPH4AQ5TD94 716 aa20.79■□□□□ 0.92
UBR4-210ENST00000466969 USP21Q9UK80 565 aa20.79■□□□□ 0.92
UBR4-210ENST00000466969 SETD5Q9C0A6 1442 aa20.78■□□□□ 0.92
UBR4-210ENST00000466969 PIK3C2BO00750 1634 aa20.78■□□□□ 0.92
UBR4-210ENST00000466969 C19orf44Q9H6X5 657 aa20.78■□□□□ 0.92
UBR4-210ENST00000466969 ADAMTS2O95450 1211 aa20.77■□□□□ 0.92
UBR4-210ENST00000466969 EFCAB6Q5THR3 1501 aa20.77■□□□□ 0.92
UBR4-210ENST00000466969 FYCO1Q9BQS8 1478 aa20.75■□□□□ 0.91
UBR4-210ENST00000466969 CEP152O94986 1710 aa20.74■□□□□ 0.91
UBR4-210ENST00000466969 TSPY4P0CV99 314 aa20.74■□□□□ 0.91
UBR4-210ENST00000466969 TSPY10P0CW01 314 aa20.74■□□□□ 0.91
UBR4-210ENST00000466969 BLMP54132 1417 aaPredicted RBP20.74■□□□□ 0.91
UBR4-210ENST00000466969 SF3B2Q13435 895 aaKnown RBP20.74■□□□□ 0.91
UBR4-210ENST00000466969 MTUS2Q5JR59 1369 aa20.73■□□□□ 0.91
UBR4-210ENST00000466969 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.73■□□□□ 0.91
UBR4-210ENST00000466969 DEFB132Q7Z7B7 95 aa20.73■□□□□ 0.91
UBR4-210ENST00000466969 MAST1Q9Y2H9 1570 aa20.72■□□□□ 0.91
UBR4-210ENST00000466969 NHSL1Q5SYE7 1610 aa20.72■□□□□ 0.91
UBR4-210ENST00000466969 CHD2O14647 1828 aaKnown RBP20.71■□□□□ 0.91
UBR4-210ENST00000466969 HRCP23327 699 aa20.71■□□□□ 0.91
UBR4-210ENST00000466969 PNPLA6Q8IY17 1366 aa20.71■□□□□ 0.91
UBR4-210ENST00000466969 PSDA5PKW4 1024 aaPredicted RBP20.7■□□□□ 0.9
UBR4-210ENST00000466969 MROH1Q8NDA8 1641 aa20.7■□□□□ 0.9
UBR4-210ENST00000466969 ARHGAP31Q2M1Z3 1444 aa20.7■□□□□ 0.9
UBR4-210ENST00000466969 ASXL1Q8IXJ9 1541 aa20.68■□□□□ 0.9
UBR4-210ENST00000466969 IDI1Q13907 227 aa20.67■□□□□ 0.9
UBR4-210ENST00000466969 ATRNO75882 1429 aa20.66■□□□□ 0.9
UBR4-210ENST00000466969 EIF2AK4Q9P2K8 1649 aaKnown RBP20.66■□□□□ 0.9
UBR4-210ENST00000466969 FNBP4Q8N3X1 1017 aaPredicted RBP20.65■□□□□ 0.9
UBR4-210ENST00000466969 PPP1R15AO75807 674 aaPredicted RBP20.62■□□□□ 0.89
UBR4-210ENST00000466969 SENP3-EIF4A1A0A087X0R7 540 aa20.61■□□□□ 0.89
UBR4-210ENST00000466969 PLEKHG1Q9ULL1 1385 aa20.6■□□□□ 0.89
UBR4-210ENST00000466969 TBX22Q9Y458 520 aa20.6■□□□□ 0.89
UBR4-210ENST00000466969 HDGFP51858 240 aaKnown RBP20.59■□□□□ 0.89
UBR4-210ENST00000466969 DDX17Q92841 729 aaKnown RBP20.58■□□□□ 0.89
UBR4-210ENST00000466969 BCL9LQ86UU0 1499 aa20.57■□□□□ 0.88
UBR4-210ENST00000466969 DCCP43146 1447 aa20.57■□□□□ 0.88
UBR4-210ENST00000466969 PTCH1Q13635 1447 aa20.57■□□□□ 0.88
UBR4-210ENST00000466969 GJD4Q96KN9 370 aaPredicted RBP20.57■□□□□ 0.88
UBR4-210ENST00000466969 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.57■□□□□ 0.887e-11■■□□□ 12.6
UBR4-210ENST00000466969 ARHGEF5Q12774 1597 aa20.56■□□□□ 0.88
UBR4-210ENST00000466969 ADGRB3O60242 1522 aa20.56■□□□□ 0.88
UBR4-210ENST00000466969 DCAF8L1A6NGE4 600 aa20.55■□□□□ 0.88
UBR4-210ENST00000466969 MST1RQ04912 1400 aa20.53■□□□□ 0.88
UBR4-210ENST00000466969 CEP162Q5TB80 1403 aa20.53■□□□□ 0.88
UBR4-210ENST00000466969 EHBP1L1Q8N3D4 1523 aa20.52■□□□□ 0.87
UBR4-210ENST00000466969 UNC13BO14795 1591 aa20.51■□□□□ 0.87
UBR4-210ENST00000466969 BAG6P46379 1132 aa20.51■□□□□ 0.87
UBR4-210ENST00000466969 PIK3R4Q99570 1358 aa20.5■□□□□ 0.87
UBR4-210ENST00000466969 SLC52A1Q9NWF4 448 aa20.5■□□□□ 0.87
UBR4-210ENST00000466969 KANK1Q14678 1352 aa20.48■□□□□ 0.87
UBR4-210ENST00000466969 ZFYVE9O95405 1425 aa20.48■□□□□ 0.87
UBR4-210ENST00000466969 R3HDM1Q15032 1099 aaKnown RBP20.48■□□□□ 0.87
UBR4-210ENST00000466969 AMOTL2Q9Y2J4 779 aa20.48■□□□□ 0.87
UBR4-210ENST00000466969 RIMS2Q9UQ26 1411 aa20.47■□□□□ 0.87
UBR4-210ENST00000466969 DUOX2Q9NRD8 1548 aa20.46■□□□□ 0.87
UBR4-210ENST00000466969 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.44■□□□□ 0.86
UBR4-210ENST00000466969 SPHKAPQ2M3C7 1700 aa20.42■□□□□ 0.86
UBR4-210ENST00000466969 ADAMTS13Q76LX8 1427 aa20.42■□□□□ 0.86
UBR4-210ENST00000466969 NOS1P29475 1434 aa20.41■□□□□ 0.86
UBR4-210ENST00000466969 BRWD3Q6RI45 1802 aa20.39■□□□□ 0.86
UBR4-210ENST00000466969 RALGAPBQ86X10 1494 aa20.39■□□□□ 0.85
UBR4-210ENST00000466969 SOS2Q07890 1332 aaPredicted RBP20.39■□□□□ 0.85
UBR4-210ENST00000466969 SEPT12Q8IYM1 358 aa20.39■□□□□ 0.85
UBR4-210ENST00000466969 C1QTNF8P60827 252 aa20.38■□□□□ 0.85
UBR4-210ENST00000466969 ZNF784Q8NCA9 323 aaPredicted RBP20.38■□□□□ 0.85
UBR4-210ENST00000466969 TRPM2O94759 1503 aa20.37■□□□□ 0.85
UBR4-210ENST00000466969 ERBINQ96RT1 1412 aa20.37■□□□□ 0.85
UBR4-210ENST00000466969 KRT27Q7Z3Y8 459 aa20.37■□□□□ 0.85
UBR4-210ENST00000466969 GLI3P10071 1580 aa20.37■□□□□ 0.85
UBR4-210ENST00000466969 EN1Q05925 392 aaPredicted RBP20.36■□□□□ 0.85
UBR4-210ENST00000466969 UNC5CLQ8IV45 518 aa20.36■□□□□ 0.85
UBR4-210ENST00000466969 PTPRUQ92729 1446 aa20.36■□□□□ 0.85
UBR4-210ENST00000466969 KIF15Q9NS87 1388 aa20.34■□□□□ 0.85
UBR4-210ENST00000466969 MYO5BQ9ULV0 1848 aa20.34■□□□□ 0.85
UBR4-210ENST00000466969 LMTK2Q8IWU2 1503 aa20.34■□□□□ 0.85
UBR4-210ENST00000466969 PPP1R1BQ9UD71 204 aaPredicted RBP20.34■□□□□ 0.85
UBR4-210ENST00000466969 COL22A1Q8NFW1 1626 aaPredicted RBP20.34■□□□□ 0.85
UBR4-210ENST00000466969 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.33■□□□□ 0.85
UBR4-210ENST00000466969 MYOM2P54296 1465 aa20.32■□□□□ 0.84
UBR4-210ENST00000466969 RPRD2Q5VT52 1461 aaKnown RBP20.32■□□□□ 0.84
UBR4-210ENST00000466969 CHGAP10645 457 aaKnown RBP20.32■□□□□ 0.84
UBR4-210ENST00000466969 LAMC1P11047 1609 aa20.31■□□□□ 0.84
UBR4-210ENST00000466969 C1orf167Q5SNV9 1468 aa20.3■□□□□ 0.84
UBR4-210ENST00000466969 MARF1Q9Y4F3 1742 aaKnown RBP20.3■□□□□ 0.84
UBR4-210ENST00000466969 ADGRL3Q9HAR2 1447 aa20.3■□□□□ 0.84
UBR4-210ENST00000466969 GCC2Q8IWJ2 1684 aa20.3■□□□□ 0.84
UBR4-210ENST00000466969 RRP7BPQ9NSQ0 103 aa20.3■□□□□ 0.84
UBR4-210ENST00000466969 TMEM131LA2VDJ0 1609 aa20.27■□□□□ 0.84
UBR4-210ENST00000466969 ORAI2Q96SN7 254 aa20.27■□□□□ 0.84
UBR4-210ENST00000466969 A0A0G2JS52 829 aa20.26■□□□□ 0.83
UBR4-210ENST00000466969 MYT1Q01538 1121 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms