RNA–Protein interactions for RNA: ENST00000466957.1

SLF1-203, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 5

Gene SLF1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-203ENST00000466957 MTRQ99707 1265 aa14.06□□□□□ -0.16
SLF1-203ENST00000466957 TJAP1Q5JTD0 557 aa14.04□□□□□ -0.16
SLF1-203ENST00000466957 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.03□□□□□ -0.16
SLF1-203ENST00000466957 PXYLP1Q8TE99 480 aa14.03□□□□□ -0.16
SLF1-203ENST00000466957 IL21Q9HBE4 155 aa14.03□□□□□ -0.16
SLF1-203ENST00000466957 METTL3Q86U44 580 aaKnown RBP14.01□□□□□ -0.17
SLF1-203ENST00000466957 COPS2P61201 443 aa14□□□□□ -0.17
SLF1-203ENST00000466957 PRR14Q9BWN1 585 aa14□□□□□ -0.17
SLF1-203ENST00000466957 RGS20O76081 388 aa13.98□□□□□ -0.17
SLF1-203ENST00000466957 ZNF516Q92618 1163 aa13.97□□□□□ -0.17
SLF1-203ENST00000466957 CFHP08603 1231 aa13.96□□□□□ -0.17
SLF1-203ENST00000466957 KMT5BQ4FZB7 885 aa13.96□□□□□ -0.17
SLF1-203ENST00000466957 PCDHB3Q9Y5E6 796 aa13.96□□□□□ -0.17
SLF1-203ENST00000466957 SLC10A3P09131 477 aa13.92□□□□□ -0.18
SLF1-203ENST00000466957 NLRP7Q8WX94 980 aa13.92□□□□□ -0.18
SLF1-203ENST00000466957 RSPH4AQ5TD94 716 aa13.9□□□□□ -0.18
SLF1-203ENST00000466957 BLOC1S3Q6QNY0 202 aa13.9□□□□□ -0.18
SLF1-203ENST00000466957 NKX2-3Q8TAU0 364 aa13.89□□□□□ -0.19
SLF1-203ENST00000466957 ACTN4O43707 911 aaKnown RBP13.88□□□□□ -0.19
SLF1-203ENST00000466957 RDH13Q8NBN7 331 aa13.88□□□□□ -0.19
SLF1-203ENST00000466957 ZPR1O75312 459 aa13.87□□□□□ -0.19
SLF1-203ENST00000466957 PPP1R18Q6NYC8 613 aa13.87□□□□□ -0.19
SLF1-203ENST00000466957 DAXXQ9UER7 740 aaPredicted RBP13.87□□□□□ -0.19
SLF1-203ENST00000466957 DDX11L8A8MPP1 907 aa13.85□□□□□ -0.19
SLF1-203ENST00000466957 MAP2K5Q13163 448 aa13.85□□□□□ -0.19
SLF1-203ENST00000466957 PHOX2BQ99453 314 aa13.85□□□□□ -0.19
SLF1-203ENST00000466957 IRX2Q9BZI1 471 aaPredicted RBP13.83□□□□□ -0.2
SLF1-203ENST00000466957 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.82□□□□□ -0.2
SLF1-203ENST00000466957 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.82□□□□□ -0.2
SLF1-203ENST00000466957 TLL1O43897 1013 aa13.81□□□□□ -0.2
SLF1-203ENST00000466957 GGCXP38435 758 aa13.81□□□□□ -0.2
SLF1-203ENST00000466957 LMOD2Q6P5Q4 547 aa13.81□□□□□ -0.2
SLF1-203ENST00000466957 SULF1Q8IWU6 871 aa13.8□□□□□ -0.2
SLF1-203ENST00000466957 IRF6O14896 467 aa13.78□□□□□ -0.2
SLF1-203ENST00000466957 NR1I2O75469 434 aa13.78□□□□□ -0.2
SLF1-203ENST00000466957 PUS10Q3MIT2 529 aaKnown RBP13.78□□□□□ -0.2
SLF1-203ENST00000466957 MINK1Q8N4C8 1332 aaPredicted RBP13.77□□□□□ -0.21
SLF1-203ENST00000466957 CCDC102AQ96A19 550 aa13.76□□□□□ -0.21
SLF1-203ENST00000466957 PRKD2Q9BZL6 878 aa13.76□□□□□ -0.21
SLF1-203ENST00000466957 MDM2Q00987 491 aaPredicted RBP13.72□□□□□ -0.21
SLF1-203ENST00000466957 FUT2Q10981 343 aa13.72□□□□□ -0.21
SLF1-203ENST00000466957 SCUBE3Q8IX30 993 aa13.71□□□□□ -0.21
SLF1-203ENST00000466957 TMUB1Q9BVT8 246 aa13.71□□□□□ -0.21
SLF1-203ENST00000466957 S1PR4O95977 384 aa13.7□□□□□ -0.22
SLF1-203ENST00000466957 ADH1BP00325 375 aa13.7□□□□□ -0.22
SLF1-203ENST00000466957 GCGRP47871 477 aa13.7□□□□□ -0.22
SLF1-203ENST00000466957 KRI1Q8N9T8 703 aaKnown RBP13.7□□□□□ -0.22
SLF1-203ENST00000466957 RNF223E7ERA6 249 aa13.68□□□□□ -0.22
SLF1-203ENST00000466957 ATP6V1AP38606 617 aa13.68□□□□□ -0.22
SLF1-203ENST00000466957 V9GY48 417 aaPredicted RBP13.67□□□□□ -0.22
SLF1-203ENST00000466957 MORN1Q5T089 497 aa13.66□□□□□ -0.22
SLF1-203ENST00000466957 SPSB2Q99619 263 aa13.66□□□□□ -0.22
SLF1-203ENST00000466957 SLC6A16Q9GZN6 736 aa13.66□□□□□ -0.22
SLF1-203ENST00000466957 PPEF1O14829 653 aaPredicted RBP13.65□□□□□ -0.22
SLF1-203ENST00000466957 CD46P15529 392 aa13.65□□□□□ -0.22
SLF1-203ENST00000466957 GRIPAP1Q4V328 841 aa13.63□□□□□ -0.23
SLF1-203ENST00000466957 ZC3H15Q8WU90 426 aaKnown RBP13.63□□□□□ -0.23
SLF1-203ENST00000466957 GPCPD1Q9NPB8 672 aa13.63□□□□□ -0.23
SLF1-203ENST00000466957 CLCN1P35523 988 aa13.62□□□□□ -0.23
SLF1-203ENST00000466957 SLC27A5Q9Y2P5 690 aa13.62□□□□□ -0.23
SLF1-203ENST00000466957 ANKLE1Q8NAG6 615 aa13.61□□□□□ -0.23
SLF1-203ENST00000466957 ZMYND10O75800 440 aa13.6□□□□□ -0.23
SLF1-203ENST00000466957 FMNL1O95466 1100 aaPredicted RBP13.6□□□□□ -0.23
SLF1-203ENST00000466957 Q6ZNB5 142 aa13.6□□□□□ -0.23
SLF1-203ENST00000466957 BARGINQ6ZT62 677 aa13.6□□□□□ -0.23
SLF1-203ENST00000466957 GFRA3O60609 400 aa13.59□□□□□ -0.23
SLF1-203ENST00000466957 KDM4AO75164 1064 aa13.58□□□□□ -0.24
SLF1-203ENST00000466957 SLC19A1P41440 591 aa13.58□□□□□ -0.24
SLF1-203ENST00000466957 LAPTM4AQ15012 233 aa13.56□□□□□ -0.24
SLF1-203ENST00000466957 THAP11Q96EK4 314 aa13.56□□□□□ -0.24
SLF1-203ENST00000466957 FAM217BQ9NTX9 383 aaPredicted RBP13.56□□□□□ -0.24
SLF1-203ENST00000466957 TTLL12Q14166 644 aaPredicted RBP13.55□□□□□ -0.24
SLF1-203ENST00000466957 RNF19BQ6ZMZ0 732 aa13.54□□□□□ -0.24
SLF1-203ENST00000466957 EMID1Q96A84 441 aaPredicted RBP13.52□□□□□ -0.25
SLF1-203ENST00000466957 REPIN1Q9BWE0 567 aaKnown RBP13.52□□□□□ -0.25
SLF1-203ENST00000466957 USP46P62068 366 aa13.51□□□□□ -0.25
SLF1-203ENST00000466957 Q3C1V9 767 aa13.51□□□□□ -0.25
SLF1-203ENST00000466957 BRICD5Q6PL45 260 aa13.51□□□□□ -0.25
SLF1-203ENST00000466957 LIAT1Q6ZQX7 453 aa13.51□□□□□ -0.25
SLF1-203ENST00000466957 PRDM9Q9NQV7 894 aa13.51□□□□□ -0.25
SLF1-203ENST00000466957 PDZRN3Q9UPQ7 1066 aa13.51□□□□□ -0.25
SLF1-203ENST00000466957 SALL2Q9Y467 1007 aaPredicted RBP13.51□□□□□ -0.25
SLF1-203ENST00000466957 PLA2G2CQ5R387 149 aa13.5□□□□□ -0.25
SLF1-203ENST00000466957 SPRYD7Q5W111 196 aa13.5□□□□□ -0.25
SLF1-203ENST00000466957 NUTM1Q86Y26 1132 aa13.5□□□□□ -0.25
SLF1-203ENST00000466957 FAM160A2Q8N612 972 aaPredicted RBP13.5□□□□□ -0.25
SLF1-203ENST00000466957 HLA-CQ95604 372 aa13.5□□□□□ -0.25
SLF1-203ENST00000466957 NRG2O14511 850 aaPredicted RBP13.49□□□□□ -0.25
SLF1-203ENST00000466957 HOXA2O43364 376 aa13.49□□□□□ -0.25
SLF1-203ENST00000466957 FCF1Q9Y324 198 aaKnown RBP13.49□□□□□ -0.25
SLF1-203ENST00000466957 SSTR3P32745 418 aaPredicted RBP13.48□□□□□ -0.25
SLF1-203ENST00000466957 GUCA2AQ02747 115 aa13.46□□□□□ -0.25
SLF1-203ENST00000466957 AMHR2Q16671 573 aa13.46□□□□□ -0.25
SLF1-203ENST00000466957 MSS51Q4VC12 460 aa13.46□□□□□ -0.25
SLF1-203ENST00000466957 ZNF697Q5TEC3 545 aa13.46□□□□□ -0.25
SLF1-203ENST00000466957 ZNF598Q86UK7 904 aaKnown RBP13.46□□□□□ -0.25
SLF1-203ENST00000466957 GIGYF2Q6Y7W6 1299 aaKnown RBP13.44□□□□□ -0.26
SLF1-203ENST00000466957 USB1Q9BQ65 265 aaKnown RBP13.42□□□□□ -0.26
SLF1-203ENST00000466957 AK7Q96M32 723 aa13.41□□□□□ -0.26
SLF1-203ENST00000466957 TRIM66O15016 1216 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms