RNA–Protein interactions for RNA: ENST00000466884.1

COL2A1-204, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 478 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-204ENST00000466884 EHBP1L1Q8N3D4 1523 aa13.13□□□□□ -0.31
COL2A1-204ENST00000466884 SETD1AO15047 1707 aaKnown RBP13.13□□□□□ -0.31
COL2A1-204ENST00000466884 CAMSAP2Q08AD1 1489 aa13.13□□□□□ -0.31
COL2A1-204ENST00000466884 TMEM94Q12767 1356 aa13.13□□□□□ -0.31
COL2A1-204ENST00000466884 KCNA6P17658 529 aa13.13□□□□□ -0.31
COL2A1-204ENST00000466884 UPF1Q92900 1129 aaKnown RBP eCLIP13.13□□□□□ -0.31
COL2A1-204ENST00000466884 RBM33Q96EV2 1170 aaKnown RBP13.13□□□□□ -0.31
COL2A1-204ENST00000466884 STAG3Q9UJ98 1225 aa13.13□□□□□ -0.31
COL2A1-204ENST00000466884 ROBO1Q9Y6N7 1651 aa13.12□□□□□ -0.31
COL2A1-204ENST00000466884 NCOA2Q15596 1464 aa13.12□□□□□ -0.31
COL2A1-204ENST00000466884 ARHGAP23Q9P227 1491 aa13.11□□□□□ -0.31
COL2A1-204ENST00000466884 SLIT1O75093 1534 aa13.11□□□□□ -0.31
COL2A1-204ENST00000466884 SLAIN2Q9P270 581 aa13.1□□□□□ -0.31
COL2A1-204ENST00000466884 JCADQ9P266 1359 aa13.09□□□□□ -0.31
COL2A1-204ENST00000466884 MEX3CQ5U5Q3 659 aaKnown RBP13.09□□□□□ -0.31
COL2A1-204ENST00000466884 TRIM52Q96A61 297 aa13.09□□□□□ -0.31
COL2A1-204ENST00000466884 SLC26A8Q96RN1 970 aa13.09□□□□□ -0.31
COL2A1-204ENST00000466884 ARHGEF5Q12774 1597 aa13.08□□□□□ -0.32
COL2A1-204ENST00000466884 PRKAR2AP13861 404 aaKnown RBP13.08□□□□□ -0.32
COL2A1-204ENST00000466884 ZNF772Q68DY9 489 aaPredicted RBP13.08□□□□□ -0.32
COL2A1-204ENST00000466884 SPDYE1Q8NFV5 336 aaPredicted RBP13.08□□□□□ -0.32
COL2A1-204ENST00000466884 BCANQ96GW7 911 aa13.08□□□□□ -0.32
COL2A1-204ENST00000466884 SSUH2Q9Y2M2 353 aa13.08□□□□□ -0.32
COL2A1-204ENST00000466884 TMEM2Q9UHN6 1383 aa13.07□□□□□ -0.32
COL2A1-204ENST00000466884 LRRC9Q6ZRR7 1453 aa13.07□□□□□ -0.32
COL2A1-204ENST00000466884 CEP152O94986 1710 aa13.07□□□□□ -0.32
COL2A1-204ENST00000466884 MSH6P52701 1360 aa13.07□□□□□ -0.32
COL2A1-204ENST00000466884 PHLPP1O60346 1717 aa13.06□□□□□ -0.32
COL2A1-204ENST00000466884 CLEC11AQ9Y240 323 aa13.06□□□□□ -0.32
COL2A1-204ENST00000466884 EIF2AK4Q9P2K8 1649 aaKnown RBP13.05□□□□□ -0.32
COL2A1-204ENST00000466884 RXRBP28702 533 aa13.04□□□□□ -0.32
COL2A1-204ENST00000466884 SPATA31A6Q5VVP1 1343 aa13.04□□□□□ -0.32
COL2A1-204ENST00000466884 ARHGAP31Q2M1Z3 1444 aa13.04□□□□□ -0.32
COL2A1-204ENST00000466884 SRCAPQ6ZRS2 3230 aa13.03□□□□□ -0.32
COL2A1-204ENST00000466884 MAP3K1Q13233 1512 aa13.03□□□□□ -0.32
COL2A1-204ENST00000466884 PIK3C2BO00750 1634 aa13.03□□□□□ -0.32
COL2A1-204ENST00000466884 IDI1Q13907 227 aa13.03□□□□□ -0.32
COL2A1-204ENST00000466884 ZNF692Q9BU19 519 aaPredicted RBP13.03□□□□□ -0.32
COL2A1-204ENST00000466884 PRDM15P57071 1507 aaPredicted RBP13.03□□□□□ -0.32
COL2A1-204ENST00000466884 MAST1Q9Y2H9 1570 aa13.03□□□□□ -0.32
COL2A1-204ENST00000466884 MROH1Q8NDA8 1641 aa13.02□□□□□ -0.32
COL2A1-204ENST00000466884 TET3O43151 1660 aa13.01□□□□□ -0.33
COL2A1-204ENST00000466884 EFCAB6Q5THR3 1501 aa13□□□□□ -0.33
COL2A1-204ENST00000466884 DUOX2Q9NRD8 1548 aa13□□□□□ -0.33
COL2A1-204ENST00000466884 NKTRP30414 1462 aaKnown RBP12.99□□□□□ -0.33
COL2A1-204ENST00000466884 KANK1Q14678 1352 aa12.99□□□□□ -0.33
COL2A1-204ENST00000466884 C14orf37Q86TY3 774 aa12.99□□□□□ -0.33
COL2A1-204ENST00000466884 RRP7BPQ9NSQ0 103 aa12.99□□□□□ -0.33
COL2A1-204ENST00000466884 FGD6Q6ZV73 1430 aa12.98□□□□□ -0.33
COL2A1-204ENST00000466884 C19orf67A6NJJ6 358 aa12.98□□□□□ -0.33
COL2A1-204ENST00000466884 NUTM2BA6NNL0 878 aaPredicted RBP12.98□□□□□ -0.33
COL2A1-204ENST00000466884 NUTM2EB1AL46 878 aaPredicted RBP12.98□□□□□ -0.33
COL2A1-204ENST00000466884 NUTM2AQ8IVF1 878 aaPredicted RBP12.98□□□□□ -0.33
COL2A1-204ENST00000466884 LRP6O75581 1613 aa12.98□□□□□ -0.33
COL2A1-204ENST00000466884 KDM5AP29375 1690 aaKnown RBP12.97□□□□□ -0.33
COL2A1-204ENST00000466884 COL16A1Q07092 1604 aaPredicted RBP12.97□□□□□ -0.33
COL2A1-204ENST00000466884 ATF3P18847 181 aa12.96□□□□□ -0.33
COL2A1-204ENST00000466884 HDGFP51858 240 aaKnown RBP12.96□□□□□ -0.33
COL2A1-204ENST00000466884 KIF15Q9NS87 1388 aa12.95□□□□□ -0.34
COL2A1-204ENST00000466884 NWD1Q149M9 1564 aa12.95□□□□□ -0.34
COL2A1-204ENST00000466884 CADPS2Q86UW7 1296 aa12.95□□□□□ -0.34
COL2A1-204ENST00000466884 SLC52A1Q9NWF4 448 aa12.95□□□□□ -0.34
COL2A1-204ENST00000466884 MYOM3Q5VTT5 1437 aa12.95□□□□□ -0.34
COL2A1-204ENST00000466884 PPP1R15AO75807 674 aaPredicted RBP12.94□□□□□ -0.34
COL2A1-204ENST00000466884 AFF2P51816 1311 aa12.93□□□□□ -0.34
COL2A1-204ENST00000466884 CDK12Q9NYV4 1490 aaPredicted RBP12.93□□□□□ -0.34
COL2A1-204ENST00000466884 C19orf44Q9H6X5 657 aa12.93□□□□□ -0.34
COL2A1-204ENST00000466884 ERBINQ96RT1 1412 aa12.93□□□□□ -0.34
COL2A1-204ENST00000466884 NCOA3Q9Y6Q9 1424 aa12.93□□□□□ -0.34
COL2A1-204ENST00000466884 CHD2O14647 1828 aaKnown RBP12.92□□□□□ -0.34
COL2A1-204ENST00000466884 NUTM2DQ5VT03 806 aaPredicted RBP12.92□□□□□ -0.34
COL2A1-204ENST00000466884 QTRT2Q9H974 415 aaKnown RBP12.92□□□□□ -0.34
COL2A1-204ENST00000466884 TBX22Q9Y458 520 aa12.92□□□□□ -0.34
COL2A1-204ENST00000466884 SHPRHQ149N8 1683 aa12.92□□□□□ -0.34
COL2A1-204ENST00000466884 RBM6P78332 1123 aaKnown RBP12.9□□□□□ -0.34
COL2A1-204ENST00000466884 PLEKHG1Q9ULL1 1385 aa12.9□□□□□ -0.34
COL2A1-204ENST00000466884 ADGRB3O60242 1522 aa12.89□□□□□ -0.35
COL2A1-204ENST00000466884 AHDC1Q5TGY3 1603 aaPredicted RBP12.89□□□□□ -0.35
COL2A1-204ENST00000466884 KANK4Q5T7N3 995 aaPredicted RBP12.89□□□□□ -0.35
COL2A1-204ENST00000466884 NOS1P29475 1434 aa12.88□□□□□ -0.35
COL2A1-204ENST00000466884 BRINP3Q76B58 766 aa12.88□□□□□ -0.35
COL2A1-204ENST00000466884 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.88□□□□□ -0.35
COL2A1-204ENST00000466884 C8orf37Q96NL8 207 aa12.88□□□□□ -0.35
COL2A1-204ENST00000466884 ZRANB1Q9UGI0 708 aa12.88□□□□□ -0.35
COL2A1-204ENST00000466884 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.88□□□□□ -0.35
COL2A1-204ENST00000466884 LMTK2Q8IWU2 1503 aa12.88□□□□□ -0.35
COL2A1-204ENST00000466884 ABCC5O15440 1437 aa12.88□□□□□ -0.35
COL2A1-204ENST00000466884 CHGAP10645 457 aaKnown RBP12.87□□□□□ -0.35
COL2A1-204ENST00000466884 CHADLQ6NUI6 762 aa12.87□□□□□ -0.35
COL2A1-204ENST00000466884 LRRC59Q96AG4 307 aaKnown RBP12.87□□□□□ -0.35
COL2A1-204ENST00000466884 CHIC2Q9UKJ5 165 aa12.87□□□□□ -0.35
COL2A1-204ENST00000466884 RIMS2Q9UQ26 1411 aa12.87□□□□□ -0.35
COL2A1-204ENST00000466884 NGLY1Q96IV0 654 aa12.86□□□□□ -0.35
COL2A1-204ENST00000466884 ZFYVE9O95405 1425 aa12.86□□□□□ -0.35
COL2A1-204ENST00000466884 GABBR2O75899 941 aa12.84□□□□□ -0.35
COL2A1-204ENST00000466884 AMOTL2Q9Y2J4 779 aa12.84□□□□□ -0.35
COL2A1-204ENST00000466884 RGS12O14924 1447 aa12.84□□□□□ -0.35
COL2A1-204ENST00000466884 DIP2AQ14689 1571 aa12.84□□□□□ -0.35
COL2A1-204ENST00000466884 ANKRD30AQ9BXX3 1397 aa12.83□□□□□ -0.36
COL2A1-204ENST00000466884 MYO5BQ9ULV0 1848 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms