RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 FECHP22830 423 aa9.38□□□□□ -0.91
CCDC58-203ENST00000466854 HIC1Q14526 733 aa9.38□□□□□ -0.91
CCDC58-203ENST00000466854 SMYD5Q6GMV2 418 aa9.37□□□□□ -0.91
CCDC58-203ENST00000466854 PXYLP1Q8TE99 480 aa9.37□□□□□ -0.91
CCDC58-203ENST00000466854 SLC4A3P48751 1232 aa9.36□□□□□ -0.91
CCDC58-203ENST00000466854 COPS2P61201 443 aa9.36□□□□□ -0.91
CCDC58-203ENST00000466854 NKX2-3Q8TAU0 364 aa9.36□□□□□ -0.91
CCDC58-203ENST00000466854 PPP1R18Q6NYC8 613 aa9.35□□□□□ -0.91
CCDC58-203ENST00000466854 METTL3Q86U44 580 aaKnown RBP9.35□□□□□ -0.91
CCDC58-203ENST00000466854 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.34□□□□□ -0.91
CCDC58-203ENST00000466854 GNPATO15228 680 aa9.34□□□□□ -0.91
CCDC58-203ENST00000466854 OATP04181 439 aa9.33□□□□□ -0.92
CCDC58-203ENST00000466854 SLC10A3P09131 477 aa9.33□□□□□ -0.92
CCDC58-203ENST00000466854 PRR14Q9BWN1 585 aa9.33□□□□□ -0.92
CCDC58-203ENST00000466854 BLOC1S3Q6QNY0 202 aa9.32□□□□□ -0.92
CCDC58-203ENST00000466854 PCDHB3Q9Y5E6 796 aa9.32□□□□□ -0.92
CCDC58-203ENST00000466854 ZPR1O75312 459 aa9.31□□□□□ -0.92
CCDC58-203ENST00000466854 CFHP08603 1231 aa9.31□□□□□ -0.92
CCDC58-203ENST00000466854 VSIG10Q8N0Z9 540 aa9.31□□□□□ -0.92
CCDC58-203ENST00000466854 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.3□□□□□ -0.92
CCDC58-203ENST00000466854 ACTN4O43707 911 aaKnown RBP9.29□□□□□ -0.92
CCDC58-203ENST00000466854 TLL1O43897 1013 aa9.28□□□□□ -0.92
CCDC58-203ENST00000466854 KMT5BQ4FZB7 885 aa9.28□□□□□ -0.92
CCDC58-203ENST00000466854 GPIHBP1Q8IV16 184 aa9.28□□□□□ -0.92
CCDC58-203ENST00000466854 PRKD2Q9BZL6 878 aa9.28□□□□□ -0.92
CCDC58-203ENST00000466854 NLRP7Q8WX94 980 aa9.27□□□□□ -0.93
CCDC58-203ENST00000466854 PHOX2BQ99453 314 aa9.27□□□□□ -0.93
CCDC58-203ENST00000466854 V9GY48 417 aaPredicted RBP9.24□□□□□ -0.93
CCDC58-203ENST00000466854 DAXXQ9UER7 740 aaPredicted RBP9.23□□□□□ -0.93
CCDC58-203ENST00000466854 TMUB1Q9BVT8 246 aa9.22□□□□□ -0.93
CCDC58-203ENST00000466854 RNF223E7ERA6 249 aa9.21□□□□□ -0.94
CCDC58-203ENST00000466854 GGCXP38435 758 aa9.21□□□□□ -0.94
CCDC58-203ENST00000466854 PUS10Q3MIT2 529 aaKnown RBP9.2□□□□□ -0.94
CCDC58-203ENST00000466854 EMID1Q96A84 441 aaPredicted RBP9.2□□□□□ -0.94
CCDC58-203ENST00000466854 DDX11L8A8MPP1 907 aa9.19□□□□□ -0.94
CCDC58-203ENST00000466854 S1PR4O95977 384 aa9.19□□□□□ -0.94
CCDC58-203ENST00000466854 LCE2BO14633 110 aa9.18□□□□□ -0.94
CCDC58-203ENST00000466854 NR1I2O75469 434 aa9.18□□□□□ -0.94
CCDC58-203ENST00000466854 ADH1BP00325 375 aa9.18□□□□□ -0.94
CCDC58-203ENST00000466854 RSPH4AQ5TD94 716 aa9.18□□□□□ -0.94
CCDC58-203ENST00000466854 SCUBE3Q8IX30 993 aa9.18□□□□□ -0.94
CCDC58-203ENST00000466854 RDH13Q8NBN7 331 aa9.18□□□□□ -0.94
CCDC58-203ENST00000466854 PPEF1O14829 653 aaPredicted RBP9.17□□□□□ -0.94
CCDC58-203ENST00000466854 GFRA3O60609 400 aa9.17□□□□□ -0.94
CCDC58-203ENST00000466854 MAP2K5Q13163 448 aa9.17□□□□□ -0.94
CCDC58-203ENST00000466854 FUT2Q10981 343 aa9.16□□□□□ -0.94
CCDC58-203ENST00000466854 LAPTM4AQ15012 233 aa9.16□□□□□ -0.94
CCDC58-203ENST00000466854 MORN1Q5T089 497 aa9.15□□□□□ -0.94
CCDC58-203ENST00000466854 ANKLE1Q8NAG6 615 aa9.15□□□□□ -0.94
CCDC58-203ENST00000466854 GCGRP47871 477 aa9.14□□□□□ -0.95
CCDC58-203ENST00000466854 SULF1Q8IWU6 871 aa9.14□□□□□ -0.95
CCDC58-203ENST00000466854 TULP1O00294 542 aaPredicted RBP9.13□□□□□ -0.95
CCDC58-203ENST00000466854 NRG2O14511 850 aaPredicted RBP9.13□□□□□ -0.95
CCDC58-203ENST00000466854 IRF6O14896 467 aa9.13□□□□□ -0.95
CCDC58-203ENST00000466854 SLC6A16Q9GZN6 736 aa9.13□□□□□ -0.95
CCDC58-203ENST00000466854 ATP6V1AP38606 617 aa9.12□□□□□ -0.95
CCDC58-203ENST00000466854 SLC19A1P41440 591 aa9.12□□□□□ -0.95
CCDC58-203ENST00000466854 PLA2G2CQ5R387 149 aa9.12□□□□□ -0.95
CCDC58-203ENST00000466854 THAP11Q96EK4 314 aa9.12□□□□□ -0.95
CCDC58-203ENST00000466854 SPSB2Q99619 263 aa9.12□□□□□ -0.95
CCDC58-203ENST00000466854 LIAT1Q6ZQX7 453 aa9.11□□□□□ -0.95
CCDC58-203ENST00000466854 TRIM67Q6ZTA4 783 aa9.11□□□□□ -0.95
CCDC58-203ENST00000466854 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.11□□□□□ -0.95
CCDC58-203ENST00000466854 SLC27A5Q9Y2P5 690 aa9.11□□□□□ -0.95
CCDC58-203ENST00000466854 MINK1Q8N4C8 1332 aaPredicted RBP9.1□□□□□ -0.95
CCDC58-203ENST00000466854 CD46P15529 392 aa9.1□□□□□ -0.95
CCDC58-203ENST00000466854 SPRYD7Q5W111 196 aa9.1□□□□□ -0.95
CCDC58-203ENST00000466854 TRAF7Q6Q0C0 670 aa9.1□□□□□ -0.95
CCDC58-203ENST00000466854 CCDC102AQ96A19 550 aa9.1□□□□□ -0.95
CCDC58-203ENST00000466854 PDZRN3Q9UPQ7 1066 aa9.1□□□□□ -0.95
CCDC58-203ENST00000466854 MDM2Q00987 491 aaPredicted RBP9.08□□□□□ -0.96
CCDC58-203ENST00000466854 FAM160A2Q8N612 972 aaPredicted RBP9.07□□□□□ -0.96
CCDC58-203ENST00000466854 RNF19BQ6ZMZ0 732 aa9.06□□□□□ -0.96
CCDC58-203ENST00000466854 ZNF598Q86UK7 904 aaKnown RBP9.06□□□□□ -0.96
CCDC58-203ENST00000466854 PRDM9Q9NQV7 894 aa9.06□□□□□ -0.96
CCDC58-203ENST00000466854 SALL2Q9Y467 1007 aaPredicted RBP9.06□□□□□ -0.96
CCDC58-203ENST00000466854 FMNL1O95466 1100 aaPredicted RBP9.05□□□□□ -0.96
CCDC58-203ENST00000466854 LMOD2Q6P5Q4 547 aa9.05□□□□□ -0.96
CCDC58-203ENST00000466854 BRICD5Q6PL45 260 aa9.05□□□□□ -0.96
CCDC58-203ENST00000466854 ZNF697Q5TEC3 545 aa9.04□□□□□ -0.96
CCDC58-203ENST00000466854 ZNF775Q96BV0 537 aaPredicted RBP9.03□□□□□ -0.96
CCDC58-203ENST00000466854 FCF1Q9Y324 198 aaKnown RBP9.03□□□□□ -0.96
CCDC58-203ENST00000466854 KDM4AO75164 1064 aa9.02□□□□□ -0.97
CCDC58-203ENST00000466854 PRR20EP86478 221 aa9.02□□□□□ -0.97
CCDC58-203ENST00000466854 PRR20CP86479 221 aa9.02□□□□□ -0.97
CCDC58-203ENST00000466854 PRR20DP86480 221 aa9.02□□□□□ -0.97
CCDC58-203ENST00000466854 PRR20BP86481 221 aa9.02□□□□□ -0.97
CCDC58-203ENST00000466854 PRR20AP86496 221 aa9.02□□□□□ -0.97
CCDC58-203ENST00000466854 HLA-CQ95604 372 aa9.02□□□□□ -0.97
CCDC58-203ENST00000466854 GDF9O60383 454 aa9.01□□□□□ -0.97
CCDC58-203ENST00000466854 GRIPAP1Q4V328 841 aa9.01□□□□□ -0.97
CCDC58-203ENST00000466854 MSS51Q4VC12 460 aa9.01□□□□□ -0.97
CCDC58-203ENST00000466854 REPIN1Q9BWE0 567 aaKnown RBP9.01□□□□□ -0.97
CCDC58-203ENST00000466854 GPCPD1Q9NPB8 672 aa9.01□□□□□ -0.97
CCDC58-203ENST00000466854 FAM217BQ9NTX9 383 aaPredicted RBP9.01□□□□□ -0.97
CCDC58-203ENST00000466854 ZNF787Q6DD87 383 aa9□□□□□ -0.97
CCDC58-203ENST00000466854 TNFRSF10AO00220 468 aa8.99□□□□□ -0.97
CCDC58-203ENST00000466854 CLCN1P35523 988 aa8.99□□□□□ -0.97
CCDC58-203ENST00000466854 HOXA2O43364 376 aa8.98□□□□□ -0.97
CCDC58-203ENST00000466854 ZMYND10O75800 440 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms