RNA–Protein interactions for RNA: ENST00000466832.5

TRA2B-209, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-209ENST00000466832 CADPS2Q86UW7 1296 aa8.39□□□□□ -1.07
TRA2B-209ENST00000466832 RAB3GAP2Q9H2M9 1393 aa8.39□□□□□ -1.07
TRA2B-209ENST00000466832 NCOA2Q15596 1464 aa8.39□□□□□ -1.07
TRA2B-209ENST00000466832 ZNF142P52746 1687 aaPredicted RBP8.39□□□□□ -1.07
TRA2B-209ENST00000466832 HFM1A2PYH4 1435 aa8.39□□□□□ -1.07
TRA2B-209ENST00000466832 POTEDQ86YR6 584 aa8.39□□□□□ -1.07
TRA2B-209ENST00000466832 TRIM52Q96A61 297 aa8.38□□□□□ -1.07
TRA2B-209ENST00000466832 RAPGEF6Q8TEU7 1601 aa8.38□□□□□ -1.07
TRA2B-209ENST00000466832 ITSN2Q9NZM3 1697 aa8.37□□□□□ -1.07
TRA2B-209ENST00000466832 ZNF467Q7Z7K2 595 aaPredicted RBP8.37□□□□□ -1.07
TRA2B-209ENST00000466832 SENP3-EIF4A1A0A087X0R7 540 aa8.37□□□□□ -1.07
TRA2B-209ENST00000466832 RANGAP1P46060 587 aaPredicted RBP8.37□□□□□ -1.07
TRA2B-209ENST00000466832 MTUS2Q5JR59 1369 aa8.36□□□□□ -1.07
TRA2B-209ENST00000466832 CNTLNQ9NXG0 1405 aa8.36□□□□□ -1.07
TRA2B-209ENST00000466832 RXRBP28702 533 aa8.35□□□□□ -1.07
TRA2B-209ENST00000466832 ABCA8O94911 1581 aa8.35□□□□□ -1.07
TRA2B-209ENST00000466832 ESF1Q9H501 851 aaKnown RBP8.34□□□□□ -1.07
TRA2B-209ENST00000466832 CENPBP07199 599 aaPredicted RBP8.34□□□□□ -1.07
TRA2B-209ENST00000466832 BRPF1P55201 1214 aaPredicted RBP8.34□□□□□ -1.07
TRA2B-209ENST00000466832 PDAP1Q13442 181 aaKnown RBP8.34□□□□□ -1.07
TRA2B-209ENST00000466832 REM2Q8IYK8 340 aaPredicted RBP8.34□□□□□ -1.07
TRA2B-209ENST00000466832 SYNMO15061 1565 aa8.34□□□□□ -1.07
TRA2B-209ENST00000466832 DNMT1P26358 1616 aaKnown RBP8.33□□□□□ -1.08
TRA2B-209ENST00000466832 ADGBQ8N7X0 1667 aa8.33□□□□□ -1.08
TRA2B-209ENST00000466832 FAM135BQ49AJ0 1406 aa8.33□□□□□ -1.08
TRA2B-209ENST00000466832 AGLP35573 1532 aa8.33□□□□□ -1.08
TRA2B-209ENST00000466832 ARHGEF1Q92888 912 aaKnown RBP8.32□□□□□ -1.08
TRA2B-209ENST00000466832 HOMEZQ8IX15 550 aa8.32□□□□□ -1.08
TRA2B-209ENST00000466832 ROCK1Q13464 1354 aa8.32□□□□□ -1.08
TRA2B-209ENST00000466832 VWDEQ8N2E2 1590 aa8.32□□□□□ -1.08
TRA2B-209ENST00000466832 CROCC2H7BZ55 1655 aa8.32□□□□□ -1.08
TRA2B-209ENST00000466832 POLR1AO95602 1720 aaPredicted RBP8.31□□□□□ -1.08
TRA2B-209ENST00000466832 CACNB1Q02641 598 aaPredicted RBP8.31□□□□□ -1.08
TRA2B-209ENST00000466832 MROH2AA6NES4 1674 aa8.31□□□□□ -1.08
TRA2B-209ENST00000466832 CEP170BQ9Y4F5 1589 aaPredicted RBP8.31□□□□□ -1.08
TRA2B-209ENST00000466832 REREQ9P2R6 1566 aa8.3□□□□□ -1.08
TRA2B-209ENST00000466832 CDK13Q14004 1512 aaKnown RBP8.3□□□□□ -1.08
TRA2B-209ENST00000466832 NAIPQ13075 1403 aa8.3□□□□□ -1.08
TRA2B-209ENST00000466832 ATAD2Q6PL18 1390 aa8.3□□□□□ -1.08
TRA2B-209ENST00000466832 NUP153P49790 1475 aaKnown RBP8.29□□□□□ -1.08
TRA2B-209ENST00000466832 MYO3AQ8NEV4 1616 aa8.29□□□□□ -1.08
TRA2B-209ENST00000466832 ZC3H15Q8WU90 426 aaKnown RBP8.29□□□□□ -1.08
TRA2B-209ENST00000466832 NHSL1Q5SYE7 1610 aa8.29□□□□□ -1.08
TRA2B-209ENST00000466832 CCDC125Q86Z20 511 aa8.29□□□□□ -1.08
TRA2B-209ENST00000466832 MFRPQ9BY79 579 aa8.29□□□□□ -1.08
TRA2B-209ENST00000466832 JCADQ9P266 1359 aa8.27□□□□□ -1.08
TRA2B-209ENST00000466832 TROQ12816 1431 aaPredicted RBP8.27□□□□□ -1.09
TRA2B-209ENST00000466832 ADGRL2O95490 1459 aa8.26□□□□□ -1.09
TRA2B-209ENST00000466832 FAM50AQ14320 339 aaKnown RBP8.26□□□□□ -1.09
TRA2B-209ENST00000466832 E2F4Q16254 413 aa8.26□□□□□ -1.09
TRA2B-209ENST00000466832 NEURL4Q96JN8 1562 aa8.26□□□□□ -1.09
TRA2B-209ENST00000466832 TESPA1A2RU30 521 aaPredicted RBP8.25□□□□□ -1.09
TRA2B-209ENST00000466832 NEUROD2Q15784 382 aa8.25□□□□□ -1.09
TRA2B-209ENST00000466832 SPATA31A6Q5VVP1 1343 aa8.25□□□□□ -1.09
TRA2B-209ENST00000466832 KIF14Q15058 1648 aa8.25□□□□□ -1.09
TRA2B-209ENST00000466832 PSEN1P49768 467 aa8.24□□□□□ -1.09
TRA2B-209ENST00000466832 TSPYL2Q9H2G4 693 aaPredicted RBP8.24□□□□□ -1.09
TRA2B-209ENST00000466832 PCDHB8Q9UN66 801 aa8.24□□□□□ -1.09
TRA2B-209ENST00000466832 CDK11AQ9UQ88 783 aaPredicted RBP8.24□□□□□ -1.09
TRA2B-209ENST00000466832 PCDHB13Q9Y5F0 798 aa8.24□□□□□ -1.09
TRA2B-209ENST00000466832 KDM5CP41229 1560 aa8.24□□□□□ -1.09
TRA2B-209ENST00000466832 PITPNM1O00562 1244 aa8.24□□□□□ -1.09
TRA2B-209ENST00000466832 MEX3CQ5U5Q3 659 aaKnown RBP8.24□□□□□ -1.09
TRA2B-209ENST00000466832 DAPK1P53355 1430 aa8.24□□□□□ -1.09
TRA2B-209ENST00000466832 ZNF579Q8NAF0 562 aaKnown RBP8.23□□□□□ -1.09
TRA2B-209ENST00000466832 ARHGEF5Q12774 1597 aa8.23□□□□□ -1.09
TRA2B-209ENST00000466832 ATP10BO94823 1461 aa8.23□□□□□ -1.09
TRA2B-209ENST00000466832 C1QTNF8P60827 252 aa8.23□□□□□ -1.09
TRA2B-209ENST00000466832 CDC42BPAQ5VT25 1732 aa8.23□□□□□ -1.09
TRA2B-209ENST00000466832 NUTM2BA6NNL0 878 aaPredicted RBP8.22□□□□□ -1.09
TRA2B-209ENST00000466832 NUTM2EB1AL46 878 aaPredicted RBP8.22□□□□□ -1.09
TRA2B-209ENST00000466832 RGS12O14924 1447 aa8.22□□□□□ -1.09
TRA2B-209ENST00000466832 NUTM2DQ5VT03 806 aaPredicted RBP8.22□□□□□ -1.09
TRA2B-209ENST00000466832 NUTM2AQ8IVF1 878 aaPredicted RBP8.22□□□□□ -1.09
TRA2B-209ENST00000466832 KDM5DQ9BY66 1539 aa8.22□□□□□ -1.09
TRA2B-209ENST00000466832 SEMA3EO15041 775 aa8.21□□□□□ -1.09
TRA2B-209ENST00000466832 SLC24A3Q9HC58 644 aa8.21□□□□□ -1.09
TRA2B-209ENST00000466832 A2ML1A8K2U0 1454 aa8.21□□□□□ -1.09
TRA2B-209ENST00000466832 NLRP6P59044 892 aa8.21□□□□□ -1.1
TRA2B-209ENST00000466832 PELP1Q8IZL8 1130 aaKnown RBP8.21□□□□□ -1.1
TRA2B-209ENST00000466832 MED14O60244 1454 aa8.2□□□□□ -1.1
TRA2B-209ENST00000466832 PPP1R37O75864 691 aa8.2□□□□□ -1.1
TRA2B-209ENST00000466832 CAMSAP2Q08AD1 1489 aa8.2□□□□□ -1.1
TRA2B-209ENST00000466832 MAST1Q9Y2H9 1570 aa8.2□□□□□ -1.1
TRA2B-209ENST00000466832 DEPDC5O75140 1603 aa8.2□□□□□ -1.1
TRA2B-209ENST00000466832 FBXO22Q8NEZ5 403 aa8.2□□□□□ -1.1
TRA2B-209ENST00000466832 ATP1B4Q9UN42 357 aaPredicted RBP8.2□□□□□ -1.1
TRA2B-209ENST00000466832 ROBO1Q9Y6N7 1651 aa8.2□□□□□ -1.1
TRA2B-209ENST00000466832 ABCC5O15440 1437 aa8.19□□□□□ -1.1
TRA2B-209ENST00000466832 SCAPERQ9BY12 1400 aa8.19□□□□□ -1.1
TRA2B-209ENST00000466832 PREX2Q70Z35 1606 aa8.19□□□□□ -1.1
TRA2B-209ENST00000466832 RBM6P78332 1123 aaKnown RBP8.19□□□□□ -1.1
TRA2B-209ENST00000466832 ZMYM3Q14202 1370 aa8.19□□□□□ -1.1
TRA2B-209ENST00000466832 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.19□□□□□ -1.1
TRA2B-209ENST00000466832 GPATCH8Q9UKJ3 1502 aaKnown RBP8.19□□□□□ -1.1
TRA2B-209ENST00000466832 NWD1Q149M9 1564 aa8.19□□□□□ -1.1
TRA2B-209ENST00000466832 PPP1R15AO75807 674 aaPredicted RBP8.19□□□□□ -1.1
TRA2B-209ENST00000466832 SMYD5Q6GMV2 418 aa8.19□□□□□ -1.1
TRA2B-209ENST00000466832 STRCP1A6NGW2 1772 aa8.18□□□□□ -1.1
TRA2B-209ENST00000466832 SOX12O15370 315 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms