RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.82□□□□□ -0.68
CHMP2B-202ENST00000466696 GNPATO15228 680 aa10.8□□□□□ -0.68
CHMP2B-202ENST00000466696 PXYLP1Q8TE99 480 aa10.8□□□□□ -0.68
CHMP2B-202ENST00000466696 ZNF516Q92618 1163 aa10.79□□□□□ -0.68
CHMP2B-202ENST00000466696 IRX2Q9BZI1 471 aaPredicted RBP10.78□□□□□ -0.68
CHMP2B-202ENST00000466696 GPR37O15354 613 aa10.77□□□□□ -0.69
CHMP2B-202ENST00000466696 COPS2P61201 443 aa10.77□□□□□ -0.69
CHMP2B-202ENST00000466696 METTL3Q86U44 580 aaKnown RBP10.77□□□□□ -0.69
CHMP2B-202ENST00000466696 PCDHB3Q9Y5E6 796 aa10.77□□□□□ -0.69
CHMP2B-202ENST00000466696 KMT5BQ4FZB7 885 aa10.76□□□□□ -0.69
CHMP2B-202ENST00000466696 TULP1O00294 542 aaPredicted RBP10.75□□□□□ -0.69
CHMP2B-202ENST00000466696 GPIHBP1Q8IV16 184 aa10.75□□□□□ -0.69
CHMP2B-202ENST00000466696 FECHP22830 423 aa10.74□□□□□ -0.69
CHMP2B-202ENST00000466696 RSPH4AQ5TD94 716 aa10.74□□□□□ -0.69
CHMP2B-202ENST00000466696 PPP1R18Q6NYC8 613 aa10.74□□□□□ -0.69
CHMP2B-202ENST00000466696 ZPR1O75312 459 aa10.73□□□□□ -0.69
CHMP2B-202ENST00000466696 CFHP08603 1231 aa10.73□□□□□ -0.69
CHMP2B-202ENST00000466696 ACTN4O43707 911 aaKnown RBP10.72□□□□□ -0.69
CHMP2B-202ENST00000466696 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.72□□□□□ -0.69
CHMP2B-202ENST00000466696 SLC10A3P09131 477 aa10.71□□□□□ -0.69
CHMP2B-202ENST00000466696 GGCXP38435 758 aa10.71□□□□□ -0.69
CHMP2B-202ENST00000466696 BLOC1S3Q6QNY0 202 aa10.71□□□□□ -0.69
CHMP2B-202ENST00000466696 NKX2-3Q8TAU0 364 aa10.71□□□□□ -0.69
CHMP2B-202ENST00000466696 TMUB1Q9BVT8 246 aa10.68□□□□□ -0.7
CHMP2B-202ENST00000466696 DAXXQ9UER7 740 aaPredicted RBP10.68□□□□□ -0.7
CHMP2B-202ENST00000466696 PRKD2Q9BZL6 878 aa10.67□□□□□ -0.7
CHMP2B-202ENST00000466696 V9GY48 417 aaPredicted RBP10.66□□□□□ -0.7
CHMP2B-202ENST00000466696 NR1I2O75469 434 aa10.65□□□□□ -0.7
CHMP2B-202ENST00000466696 SULF1Q8IWU6 871 aa10.63□□□□□ -0.71
CHMP2B-202ENST00000466696 RDH13Q8NBN7 331 aa10.63□□□□□ -0.71
CHMP2B-202ENST00000466696 LAPTM4AQ15012 233 aa10.62□□□□□ -0.71
CHMP2B-202ENST00000466696 DDX11L8A8MPP1 907 aa10.61□□□□□ -0.71
CHMP2B-202ENST00000466696 TLL1O43897 1013 aa10.61□□□□□ -0.71
CHMP2B-202ENST00000466696 MAP2K5Q13163 448 aa10.61□□□□□ -0.71
CHMP2B-202ENST00000466696 PHOX2BQ99453 314 aa10.61□□□□□ -0.71
CHMP2B-202ENST00000466696 NLRP7Q8WX94 980 aa10.6□□□□□ -0.71
CHMP2B-202ENST00000466696 SCUBE3Q8IX30 993 aa10.59□□□□□ -0.71
CHMP2B-202ENST00000466696 RNF223E7ERA6 249 aa10.58□□□□□ -0.72
CHMP2B-202ENST00000466696 ADH1BP00325 375 aa10.58□□□□□ -0.72
CHMP2B-202ENST00000466696 PUS10Q3MIT2 529 aaKnown RBP10.57□□□□□ -0.72
CHMP2B-202ENST00000466696 MINK1Q8N4C8 1332 aaPredicted RBP10.57□□□□□ -0.72
CHMP2B-202ENST00000466696 IRF6O14896 467 aa10.56□□□□□ -0.72
CHMP2B-202ENST00000466696 GFRA3O60609 400 aa10.56□□□□□ -0.72
CHMP2B-202ENST00000466696 GCGRP47871 477 aa10.56□□□□□ -0.72
CHMP2B-202ENST00000466696 Q6ZNB5 142 aa10.56□□□□□ -0.72
CHMP2B-202ENST00000466696 ANKLE1Q8NAG6 615 aa10.56□□□□□ -0.72
CHMP2B-202ENST00000466696 S1PR4O95977 384 aa10.55□□□□□ -0.72
CHMP2B-202ENST00000466696 ATP6V1AP38606 617 aa10.55□□□□□ -0.72
CHMP2B-202ENST00000466696 FUT2Q10981 343 aa10.54□□□□□ -0.72
CHMP2B-202ENST00000466696 SLC6A16Q9GZN6 736 aa10.54□□□□□ -0.72
CHMP2B-202ENST00000466696 MORN1Q5T089 497 aa10.53□□□□□ -0.72
CHMP2B-202ENST00000466696 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.53□□□□□ -0.72
CHMP2B-202ENST00000466696 SPSB2Q99619 263 aa10.53□□□□□ -0.72
CHMP2B-202ENST00000466696 SLC19A1P41440 591 aa10.52□□□□□ -0.73
CHMP2B-202ENST00000466696 NRG2O14511 850 aaPredicted RBP10.51□□□□□ -0.73
CHMP2B-202ENST00000466696 GRIPAP1Q4V328 841 aa10.51□□□□□ -0.73
CHMP2B-202ENST00000466696 PPEF1O14829 653 aaPredicted RBP10.5□□□□□ -0.73
CHMP2B-202ENST00000466696 CCDC102AQ96A19 550 aa10.49□□□□□ -0.73
CHMP2B-202ENST00000466696 PDZRN3Q9UPQ7 1066 aa10.49□□□□□ -0.73
CHMP2B-202ENST00000466696 FMNL1O95466 1100 aaPredicted RBP10.48□□□□□ -0.73
CHMP2B-202ENST00000466696 CD46P15529 392 aa10.48□□□□□ -0.73
CHMP2B-202ENST00000466696 MDM2Q00987 491 aaPredicted RBP10.48□□□□□ -0.73
CHMP2B-202ENST00000466696 LMOD2Q6P5Q4 547 aa10.48□□□□□ -0.73
CHMP2B-202ENST00000466696 SLC27A5Q9Y2P5 690 aa10.48□□□□□ -0.73
CHMP2B-202ENST00000466696 SALL2Q9Y467 1007 aaPredicted RBP10.48□□□□□ -0.73
CHMP2B-202ENST00000466696 EMID1Q96A84 441 aaPredicted RBP10.47□□□□□ -0.73
CHMP2B-202ENST00000466696 THAP11Q96EK4 314 aa10.47□□□□□ -0.73
CHMP2B-202ENST00000466696 SPRYD7Q5W111 196 aa10.46□□□□□ -0.73
CHMP2B-202ENST00000466696 ZNF598Q86UK7 904 aaKnown RBP10.45□□□□□ -0.74
CHMP2B-202ENST00000466696 CLCN1P35523 988 aa10.44□□□□□ -0.74
CHMP2B-202ENST00000466696 LIAT1Q6ZQX7 453 aa10.44□□□□□ -0.74
CHMP2B-202ENST00000466696 GPCPD1Q9NPB8 672 aa10.44□□□□□ -0.74
CHMP2B-202ENST00000466696 KDM4AO75164 1064 aa10.43□□□□□ -0.74
CHMP2B-202ENST00000466696 Q3C1V9 767 aa10.43□□□□□ -0.74
CHMP2B-202ENST00000466696 BRICD5Q6PL45 260 aa10.43□□□□□ -0.74
CHMP2B-202ENST00000466696 TRAF7Q6Q0C0 670 aa10.43□□□□□ -0.74
CHMP2B-202ENST00000466696 KRI1Q8N9T8 703 aaKnown RBP10.43□□□□□ -0.74
CHMP2B-202ENST00000466696 USP46P62068 366 aa10.42□□□□□ -0.74
CHMP2B-202ENST00000466696 FAM160A2Q8N612 972 aaPredicted RBP10.41□□□□□ -0.74
CHMP2B-202ENST00000466696 PLA2G2CQ5R387 149 aa10.4□□□□□ -0.74
CHMP2B-202ENST00000466696 ZNF697Q5TEC3 545 aa10.4□□□□□ -0.74
CHMP2B-202ENST00000466696 MSS51Q4VC12 460 aa10.39□□□□□ -0.75
CHMP2B-202ENST00000466696 RNF19BQ6ZMZ0 732 aa10.39□□□□□ -0.75
CHMP2B-202ENST00000466696 BARGINQ6ZT62 677 aa10.39□□□□□ -0.75
CHMP2B-202ENST00000466696 TRIM67Q6ZTA4 783 aa10.39□□□□□ -0.75
CHMP2B-202ENST00000466696 FAM217BQ9NTX9 383 aaPredicted RBP10.39□□□□□ -0.75
CHMP2B-202ENST00000466696 FCF1Q9Y324 198 aaKnown RBP10.39□□□□□ -0.75
CHMP2B-202ENST00000466696 ZMYND10O75800 440 aa10.38□□□□□ -0.75
CHMP2B-202ENST00000466696 PRR20EP86478 221 aa10.38□□□□□ -0.75
CHMP2B-202ENST00000466696 PRR20CP86479 221 aa10.38□□□□□ -0.75
CHMP2B-202ENST00000466696 PRR20DP86480 221 aa10.38□□□□□ -0.75
CHMP2B-202ENST00000466696 PRR20BP86481 221 aa10.38□□□□□ -0.75
CHMP2B-202ENST00000466696 PRR20AP86496 221 aa10.38□□□□□ -0.75
CHMP2B-202ENST00000466696 LCE2BO14633 110 aa10.37□□□□□ -0.75
CHMP2B-202ENST00000466696 RPIAP49247 311 aa10.37□□□□□ -0.75
CHMP2B-202ENST00000466696 ZC3H15Q8WU90 426 aaKnown RBP10.37□□□□□ -0.75
CHMP2B-202ENST00000466696 PRDM9Q9NQV7 894 aa10.36□□□□□ -0.75
CHMP2B-202ENST00000466696 HOXA2O43364 376 aa10.35□□□□□ -0.75
CHMP2B-202ENST00000466696 GDF9O60383 454 aa10.34□□□□□ -0.75
CHMP2B-202ENST00000466696 CD2BP2O95400 341 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms