RNA–Protein interactions for RNA: ENST00000466560.1

LINC00879-204, long intergenic non-protein coding RNA 879, humanhuman

TSL 5

Gene LINC00879, Length 777 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00879-204ENST00000466560 SLC4A3P48751 1232 aa10.11□□□□□ -0.79
LINC00879-204ENST00000466560 METTL3Q86U44 580 aaKnown RBP10.11□□□□□ -0.79
LINC00879-204ENST00000466560 TMEM134Q9H6X4 195 aa10.11□□□□□ -0.79
LINC00879-204ENST00000466560 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.1□□□□□ -0.79
LINC00879-204ENST00000466560 ZMYND10O75800 440 aa10.09□□□□□ -0.79
LINC00879-204ENST00000466560 NECTIN2Q92692 538 aa10.08□□□□□ -0.8
LINC00879-204ENST00000466560 ITGBL1O95965 494 aaPredicted RBP10.07□□□□□ -0.8
LINC00879-204ENST00000466560 APLP1P51693 650 aa10.07□□□□□ -0.8
LINC00879-204ENST00000466560 BARGINQ6ZT62 677 aa10.06□□□□□ -0.8
LINC00879-204ENST00000466560 MAP2K5Q13163 448 aa10.05□□□□□ -0.8
LINC00879-204ENST00000466560 IFFO2Q5TF58 517 aa10.05□□□□□ -0.8
LINC00879-204ENST00000466560 SLC24A3Q9HC58 644 aa10.05□□□□□ -0.8
LINC00879-204ENST00000466560 NLRP7Q8WX94 980 aa10.04□□□□□ -0.8
LINC00879-204ENST00000466560 KCNC4Q03721 635 aa10.03□□□□□ -0.8
LINC00879-204ENST00000466560 PHOX2BQ99453 314 aa10.03□□□□□ -0.8
LINC00879-204ENST00000466560 KRI1Q8N9T8 703 aaKnown RBP10.02□□□□□ -0.81
LINC00879-204ENST00000466560 IRF6O14896 467 aa10.01□□□□□ -0.81
LINC00879-204ENST00000466560 SLC10A3P09131 477 aa10.01□□□□□ -0.81
LINC00879-204ENST00000466560 TJAP1Q5JTD0 557 aa10.01□□□□□ -0.81
LINC00879-204ENST00000466560 MTRQ99707 1265 aa10.01□□□□□ -0.81
LINC00879-204ENST00000466560 MINK1Q8N4C8 1332 aaPredicted RBP10.01□□□□□ -0.81
LINC00879-204ENST00000466560 PRR14Q9BWN1 585 aa10□□□□□ -0.81
LINC00879-204ENST00000466560 DAXXQ9UER7 740 aaPredicted RBP10□□□□□ -0.81
LINC00879-204ENST00000466560 A0A0G2JS52 829 aa9.99□□□□□ -0.81
LINC00879-204ENST00000466560 CFHP08603 1231 aa9.99□□□□□ -0.81
LINC00879-204ENST00000466560 CCDC102AQ96A19 550 aa9.99□□□□□ -0.81
LINC00879-204ENST00000466560 IL21Q9HBE4 155 aa9.99□□□□□ -0.81
LINC00879-204ENST00000466560 KMT5BQ4FZB7 885 aa9.98□□□□□ -0.81
LINC00879-204ENST00000466560 COPS2P61201 443 aa9.97□□□□□ -0.81
LINC00879-204ENST00000466560 RSPH4AQ5TD94 716 aa9.97□□□□□ -0.81
LINC00879-204ENST00000466560 PCDHB3Q9Y5E6 796 aa9.97□□□□□ -0.81
LINC00879-204ENST00000466560 DDX11L8A8MPP1 907 aa9.96□□□□□ -0.82
LINC00879-204ENST00000466560 RDH13Q8NBN7 331 aa9.96□□□□□ -0.82
LINC00879-204ENST00000466560 ZNF516Q92618 1163 aa9.96□□□□□ -0.82
LINC00879-204ENST00000466560 AK7Q96M32 723 aa9.95□□□□□ -0.82
LINC00879-204ENST00000466560 ACTN4O43707 911 aaKnown RBP9.94□□□□□ -0.82
LINC00879-204ENST00000466560 MDM2Q00987 491 aaPredicted RBP9.93□□□□□ -0.82
LINC00879-204ENST00000466560 BLOC1S3Q6QNY0 202 aa9.93□□□□□ -0.82
LINC00879-204ENST00000466560 SULF1Q8IWU6 871 aa9.93□□□□□ -0.82
LINC00879-204ENST00000466560 ZPR1O75312 459 aa9.9□□□□□ -0.82
LINC00879-204ENST00000466560 TRIM66O15016 1216 aa9.89□□□□□ -0.83
LINC00879-204ENST00000466560 BRPF1P55201 1214 aaPredicted RBP9.89□□□□□ -0.83
LINC00879-204ENST00000466560 NKX2-3Q8TAU0 364 aa9.89□□□□□ -0.83
LINC00879-204ENST00000466560 GCGRP47871 477 aa9.87□□□□□ -0.83
LINC00879-204ENST00000466560 NEUROD2Q15784 382 aa9.87□□□□□ -0.83
LINC00879-204ENST00000466560 PUS10Q3MIT2 529 aaKnown RBP9.87□□□□□ -0.83
LINC00879-204ENST00000466560 TLL1O43897 1013 aa9.86□□□□□ -0.83
LINC00879-204ENST00000466560 NR1I2O75469 434 aa9.86□□□□□ -0.83
LINC00879-204ENST00000466560 RGS20O76081 388 aa9.86□□□□□ -0.83
LINC00879-204ENST00000466560 CLCN1P35523 988 aa9.86□□□□□ -0.83
LINC00879-204ENST00000466560 GPCPD1Q9NPB8 672 aa9.86□□□□□ -0.83
LINC00879-204ENST00000466560 CD46P15529 392 aa9.85□□□□□ -0.83
LINC00879-204ENST00000466560 FUT2Q10981 343 aa9.85□□□□□ -0.83
LINC00879-204ENST00000466560 PDE4DQ08499 809 aa9.84□□□□□ -0.83
LINC00879-204ENST00000466560 PPP1R18Q6NYC8 613 aa9.84□□□□□ -0.83
LINC00879-204ENST00000466560 TMUB1Q9BVT8 246 aa9.83□□□□□ -0.84
LINC00879-204ENST00000466560 REPIN1Q9BWE0 567 aaKnown RBP9.83□□□□□ -0.84
LINC00879-204ENST00000466560 ATP6V1AP38606 617 aa9.82□□□□□ -0.84
LINC00879-204ENST00000466560 TTLL12Q14166 644 aaPredicted RBP9.82□□□□□ -0.84
LINC00879-204ENST00000466560 SCUBE3Q8IX30 993 aa9.82□□□□□ -0.84
LINC00879-204ENST00000466560 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.82□□□□□ -0.84
LINC00879-204ENST00000466560 FAM217BQ9NTX9 383 aaPredicted RBP9.82□□□□□ -0.84
LINC00879-204ENST00000466560 MORN1Q5T089 497 aa9.81□□□□□ -0.84
LINC00879-204ENST00000466560 GPBP1L1Q9HC44 474 aaPredicted RBP9.81□□□□□ -0.84
LINC00879-204ENST00000466560 GGCXP38435 758 aa9.8□□□□□ -0.84
LINC00879-204ENST00000466560 AMHR2Q16671 573 aa9.8□□□□□ -0.84
LINC00879-204ENST00000466560 ADH1BP00325 375 aa9.79□□□□□ -0.84
LINC00879-204ENST00000466560 KDM4AO75164 1064 aa9.78□□□□□ -0.84
LINC00879-204ENST00000466560 GRIPAP1Q4V328 841 aa9.78□□□□□ -0.84
LINC00879-204ENST00000466560 SLC27A5Q9Y2P5 690 aa9.78□□□□□ -0.84
LINC00879-204ENST00000466560 SSTR3P32745 418 aaPredicted RBP9.77□□□□□ -0.85
LINC00879-204ENST00000466560 GIGYF2Q6Y7W6 1299 aaKnown RBP9.77□□□□□ -0.85
LINC00879-204ENST00000466560 S1PR4O95977 384 aa9.76□□□□□ -0.85
LINC00879-204ENST00000466560 SPSB2Q99619 263 aa9.76□□□□□ -0.85
LINC00879-204ENST00000466560 KDM4CQ9H3R0 1056 aa9.76□□□□□ -0.85
LINC00879-204ENST00000466560 PARP9Q8IXQ6 854 aa9.75□□□□□ -0.85
LINC00879-204ENST00000466560 SLC6A16Q9GZN6 736 aa9.75□□□□□ -0.85
LINC00879-204ENST00000466560 RNF223E7ERA6 249 aa9.74□□□□□ -0.85
LINC00879-204ENST00000466560 USP46P62068 366 aa9.74□□□□□ -0.85
LINC00879-204ENST00000466560 NUTM1Q86Y26 1132 aa9.74□□□□□ -0.85
LINC00879-204ENST00000466560 THAP11Q96EK4 314 aa9.74□□□□□ -0.85
LINC00879-204ENST00000466560 PRKD2Q9BZL6 878 aa9.74□□□□□ -0.85
LINC00879-204ENST00000466560 PPEF1O14829 653 aaPredicted RBP9.73□□□□□ -0.85
LINC00879-204ENST00000466560 HOXA2O43364 376 aa9.73□□□□□ -0.85
LINC00879-204ENST00000466560 FMNL1O95466 1100 aaPredicted RBP9.73□□□□□ -0.85
LINC00879-204ENST00000466560 HLA-CQ95604 372 aa9.73□□□□□ -0.85
LINC00879-204ENST00000466560 RNF19BQ6ZMZ0 732 aa9.72□□□□□ -0.85
LINC00879-204ENST00000466560 TMEM132AQ24JP5 1023 aa9.71□□□□□ -0.86
LINC00879-204ENST00000466560 BRICD5Q6PL45 260 aa9.71□□□□□ -0.86
LINC00879-204ENST00000466560 SALL2Q9Y467 1007 aaPredicted RBP9.71□□□□□ -0.86
LINC00879-204ENST00000466560 Q3C1V9 767 aa9.7□□□□□ -0.86
LINC00879-204ENST00000466560 ANKLE1Q8NAG6 615 aa9.7□□□□□ -0.86
LINC00879-204ENST00000466560 IL27Q8NEV9 243 aa9.7□□□□□ -0.86
LINC00879-204ENST00000466560 GUCA2AQ02747 115 aa9.69□□□□□ -0.86
LINC00879-204ENST00000466560 FAM160A2Q8N612 972 aaPredicted RBP9.69□□□□□ -0.86
LINC00879-204ENST00000466560 BEGAINQ9BUH8 593 aa9.69□□□□□ -0.86
LINC00879-204ENST00000466560 V9GY48 417 aaPredicted RBP9.69□□□□□ -0.86
LINC00879-204ENST00000466560 MS4A1P11836 297 aa9.68□□□□□ -0.86
LINC00879-204ENST00000466560 IRX2Q9BZI1 471 aaPredicted RBP9.68□□□□□ -0.86
LINC00879-204ENST00000466560 SPIRE2Q8WWL2 714 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms