RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 DIP2AQ14689 1571 aa10.82□□□□□ -0.68
CLDN4-204ENST00000466411 NUTM2BA6NNL0 878 aaPredicted RBP10.82□□□□□ -0.68
CLDN4-204ENST00000466411 NUTM2EB1AL46 878 aaPredicted RBP10.82□□□□□ -0.68
CLDN4-204ENST00000466411 KIF3BO15066 747 aa10.82□□□□□ -0.68
CLDN4-204ENST00000466411 NUTM2DQ5VT03 806 aaPredicted RBP10.82□□□□□ -0.68
CLDN4-204ENST00000466411 PROSER2Q86WR7 435 aaPredicted RBP10.82□□□□□ -0.68
CLDN4-204ENST00000466411 NUTM2AQ8IVF1 878 aaPredicted RBP10.82□□□□□ -0.68
CLDN4-204ENST00000466411 QTRT2Q9H974 415 aaKnown RBP10.82□□□□□ -0.68
CLDN4-204ENST00000466411 MTUS2Q5JR59 1369 aa10.81□□□□□ -0.68
CLDN4-204ENST00000466411 TET3O43151 1660 aa10.81□□□□□ -0.68
CLDN4-204ENST00000466411 RTEL1-TNFRSF6BF6WH68 1400 aa10.81□□□□□ -0.68
CLDN4-204ENST00000466411 MBD5Q9P267 1494 aa10.81□□□□□ -0.68
CLDN4-204ENST00000466411 AHDC1Q5TGY3 1603 aaPredicted RBP10.8□□□□□ -0.68
CLDN4-204ENST00000466411 ATAD2Q6PL18 1390 aa10.8□□□□□ -0.68
CLDN4-204ENST00000466411 CAPN15O75808 1086 aa10.79□□□□□ -0.68
CLDN4-204ENST00000466411 ERVK-7P63135 1459 aa10.79□□□□□ -0.68
CLDN4-204ENST00000466411 PLEKHH2Q8IVE3 1493 aa10.79□□□□□ -0.68
CLDN4-204ENST00000466411 ABCC3O15438 1527 aa10.79□□□□□ -0.68
CLDN4-204ENST00000466411 MSH6P52701 1360 aa10.78□□□□□ -0.68
CLDN4-204ENST00000466411 NWD1Q149M9 1564 aa10.78□□□□□ -0.68
CLDN4-204ENST00000466411 CFAP65Q6ZU64 1925 aaKnown RBP10.78□□□□□ -0.68
CLDN4-204ENST00000466411 NKTRP30414 1462 aaKnown RBP10.77□□□□□ -0.69
CLDN4-204ENST00000466411 CCDC125Q86Z20 511 aa10.77□□□□□ -0.69
CLDN4-204ENST00000466411 KDM5AP29375 1690 aaKnown RBP10.76□□□□□ -0.69
CLDN4-204ENST00000466411 ZNF644Q9H582 1327 aaPredicted RBP10.76□□□□□ -0.69
CLDN4-204ENST00000466411 CAMSAP2Q08AD1 1489 aa10.74□□□□□ -0.69
CLDN4-204ENST00000466411 SLC26A8Q96RN1 970 aa10.74□□□□□ -0.69
CLDN4-204ENST00000466411 CFDP1Q9UEE9 299 aaPredicted RBP10.74□□□□□ -0.69
CLDN4-204ENST00000466411 TMEM2Q9UHN6 1383 aa10.74□□□□□ -0.69
CLDN4-204ENST00000466411 EID1Q9Y6B2 187 aa10.73□□□□□ -0.69
CLDN4-204ENST00000466411 MAST1Q9Y2H9 1570 aa10.73□□□□□ -0.69
CLDN4-204ENST00000466411 NGLY1Q96IV0 654 aa10.72□□□□□ -0.69
CLDN4-204ENST00000466411 CCNB3Q8WWL7 1395 aa10.72□□□□□ -0.69
CLDN4-204ENST00000466411 SETD5Q9C0A6 1442 aa10.72□□□□□ -0.69
CLDN4-204ENST00000466411 CHD2O14647 1828 aaKnown RBP10.71□□□□□ -0.69
CLDN4-204ENST00000466411 NHSL1Q5SYE7 1610 aa10.71□□□□□ -0.69
CLDN4-204ENST00000466411 C8orf37Q96NL8 207 aa10.71□□□□□ -0.69
CLDN4-204ENST00000466411 NCOA3Q9Y6Q9 1424 aa10.71□□□□□ -0.69
CLDN4-204ENST00000466411 BCL9LQ86UU0 1499 aa10.7□□□□□ -0.7
CLDN4-204ENST00000466411 MKRN4PQ13434 485 aaPredicted RBP10.7□□□□□ -0.7
CLDN4-204ENST00000466411 POLA2Q14181 598 aa10.7□□□□□ -0.7
CLDN4-204ENST00000466411 BRINP3Q76B58 766 aa10.7□□□□□ -0.7
CLDN4-204ENST00000466411 HRCP23327 699 aa10.69□□□□□ -0.7
CLDN4-204ENST00000466411 YY1P25490 414 aa10.69□□□□□ -0.7
CLDN4-204ENST00000466411 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.69□□□□□ -0.7
CLDN4-204ENST00000466411 PIK3C2BO00750 1634 aa10.68□□□□□ -0.7
CLDN4-204ENST00000466411 MROH1Q8NDA8 1641 aa10.68□□□□□ -0.7
CLDN4-204ENST00000466411 MYOM3Q5VTT5 1437 aa10.67□□□□□ -0.7
CLDN4-204ENST00000466411 DEFB132Q7Z7B7 95 aa10.67□□□□□ -0.7
CLDN4-204ENST00000466411 ATRNO75882 1429 aa10.67□□□□□ -0.7
CLDN4-204ENST00000466411 CADPS2Q86UW7 1296 aa10.66□□□□□ -0.7
CLDN4-204ENST00000466411 FNBP4Q8N3X1 1017 aaPredicted RBP10.66□□□□□ -0.7
CLDN4-204ENST00000466411 BLMP54132 1417 aaPredicted RBP10.66□□□□□ -0.7
CLDN4-204ENST00000466411 PNPLA6Q8IY17 1366 aa10.65□□□□□ -0.7
CLDN4-204ENST00000466411 ABCB7O75027 752 aa10.65□□□□□ -0.7
CLDN4-204ENST00000466411 C19orf44Q9H6X5 657 aa10.65□□□□□ -0.7
CLDN4-204ENST00000466411 ARHGAP31Q2M1Z3 1444 aa10.65□□□□□ -0.7
CLDN4-204ENST00000466411 RSPH4AQ5TD94 716 aa10.64□□□□□ -0.71
CLDN4-204ENST00000466411 LRRC59Q96AG4 307 aaKnown RBP10.64□□□□□ -0.71
CLDN4-204ENST00000466411 TRPC5Q9UL62 973 aaPredicted RBP10.64□□□□□ -0.71
CLDN4-204ENST00000466411 ARHGEF5Q12774 1597 aa10.64□□□□□ -0.71
CLDN4-204ENST00000466411 CEP152O94986 1710 aa10.64□□□□□ -0.71
CLDN4-204ENST00000466411 IDI1Q13907 227 aa10.63□□□□□ -0.71
CLDN4-204ENST00000466411 USP21Q9UK80 565 aa10.63□□□□□ -0.71
CLDN4-204ENST00000466411 EFCAB6Q5THR3 1501 aa10.63□□□□□ -0.71
CLDN4-204ENST00000466411 ASXL1Q8IXJ9 1541 aa10.62□□□□□ -0.71
CLDN4-204ENST00000466411 PTPN23Q9H3S7 1636 aa10.62□□□□□ -0.71
CLDN4-204ENST00000466411 CCDC141Q6ZP82 1450 aa10.61□□□□□ -0.71
CLDN4-204ENST00000466411 PSDA5PKW4 1024 aaPredicted RBP10.61□□□□□ -0.71
CLDN4-204ENST00000466411 ADAMTS2O95450 1211 aa10.6□□□□□ -0.71
CLDN4-204ENST00000466411 ATF3P18847 181 aa10.6□□□□□ -0.71
CLDN4-204ENST00000466411 KANK4Q5T7N3 995 aaPredicted RBP10.6□□□□□ -0.71
CLDN4-204ENST00000466411 CROCC2H7BZ55 1655 aa10.6□□□□□ -0.71
CLDN4-204ENST00000466411 DDX17Q92841 729 aaKnown RBP10.59□□□□□ -0.71
CLDN4-204ENST00000466411 DSG3P32926 999 aa10.58□□□□□ -0.72
CLDN4-204ENST00000466411 TBX22Q9Y458 520 aa10.58□□□□□ -0.72
CLDN4-204ENST00000466411 BRWD3Q6RI45 1802 aa10.58□□□□□ -0.72
CLDN4-204ENST00000466411 EIF2AK4Q9P2K8 1649 aaKnown RBP10.58□□□□□ -0.72
CLDN4-204ENST00000466411 ZFYVE9O95405 1425 aa10.57□□□□□ -0.72
CLDN4-204ENST00000466411 MST1RQ04912 1400 aa10.57□□□□□ -0.72
CLDN4-204ENST00000466411 PLEKHG1Q9ULL1 1385 aa10.56□□□□□ -0.72
CLDN4-204ENST00000466411 GJD4Q96KN9 370 aaPredicted RBP10.56□□□□□ -0.72
CLDN4-204ENST00000466411 DCCP43146 1447 aa10.56□□□□□ -0.72
CLDN4-204ENST00000466411 SPDYE4A6NLX3 237 aa10.55□□□□□ -0.72
CLDN4-204ENST00000466411 PTCH1Q13635 1447 aa10.55□□□□□ -0.72
CLDN4-204ENST00000466411 UNC13BO14795 1591 aa10.55□□□□□ -0.72
CLDN4-204ENST00000466411 TSPY4P0CV99 314 aa10.54□□□□□ -0.72
CLDN4-204ENST00000466411 TSPY10P0CW01 314 aa10.54□□□□□ -0.72
CLDN4-204ENST00000466411 ADAMTS13Q76LX8 1427 aa10.54□□□□□ -0.72
CLDN4-204ENST00000466411 C14orf37Q86TY3 774 aa10.54□□□□□ -0.72
CLDN4-204ENST00000466411 STAG3Q9UJ98 1225 aa10.54□□□□□ -0.72
CLDN4-204ENST00000466411 CEP350Q5VT06 3117 aa10.54□□□□□ -0.72
CLDN4-204ENST00000466411 LAMC1P11047 1609 aa10.54□□□□□ -0.72
CLDN4-204ENST00000466411 SPHKAPQ2M3C7 1700 aa10.53□□□□□ -0.72
CLDN4-204ENST00000466411 RRBP1Q9P2E9 1410 aaKnown RBP10.53□□□□□ -0.72
CLDN4-204ENST00000466411 SENP3-EIF4A1A0A087X0R7 540 aa10.53□□□□□ -0.72
CLDN4-204ENST00000466411 GLI3P10071 1580 aa10.52□□□□□ -0.72
CLDN4-204ENST00000466411 NOS1P29475 1434 aa10.52□□□□□ -0.73
CLDN4-204ENST00000466411 PTPRUQ92729 1446 aa10.52□□□□□ -0.73
CLDN4-204ENST00000466411 ZNF784Q8NCA9 323 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms