RNA–Protein interactions for RNA: ENST00000466391.1

LSG1-206, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 791 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-206ENST00000466391 TTLL12Q14166 644 aaPredicted RBP13.63□□□□□ -0.23
LSG1-206ENST00000466391 NEUROD2Q15784 382 aa13.63□□□□□ -0.23
LSG1-206ENST00000466391 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.62□□□□□ -0.23
LSG1-206ENST00000466391 FAM98CQ17RN3 349 aaKnown RBP13.62□□□□□ -0.23
LSG1-206ENST00000466391 DNAJB2P25686 324 aa13.61□□□□□ -0.23
LSG1-206ENST00000466391 BRPF1P55201 1214 aaPredicted RBP13.61□□□□□ -0.23
LSG1-206ENST00000466391 LAPTM4BQ86VI4 370 aa13.6□□□□□ -0.23
LSG1-206ENST00000466391 GPBP1L1Q9HC44 474 aaPredicted RBP13.6□□□□□ -0.23
LSG1-206ENST00000466391 PARP9Q8IXQ6 854 aa13.59□□□□□ -0.23
LSG1-206ENST00000466391 CLCN1P35523 988 aa13.58□□□□□ -0.24
LSG1-206ENST00000466391 REPIN1Q9BWE0 567 aaKnown RBP13.58□□□□□ -0.24
LSG1-206ENST00000466391 TMEM134Q9H6X4 195 aa13.57□□□□□ -0.24
LSG1-206ENST00000466391 GPCPD1Q9NPB8 672 aa13.57□□□□□ -0.24
LSG1-206ENST00000466391 GOLGA8CPA6NN73 597 aa13.56□□□□□ -0.24
LSG1-206ENST00000466391 ZFRQ96KR1 1074 aaKnown RBP13.56□□□□□ -0.24
LSG1-206ENST00000466391 WIZO95785 1651 aa13.56□□□□□ -0.24
LSG1-206ENST00000466391 SMARCA4P51532 1647 aa13.55□□□□□ -0.24
LSG1-206ENST00000466391 SWT1Q5T5J6 900 aaKnown RBP13.55□□□□□ -0.24
LSG1-206ENST00000466391 GIGYF2Q6Y7W6 1299 aaKnown RBP13.55□□□□□ -0.24
LSG1-206ENST00000466391 HDGFP51858 240 aaKnown RBP13.54□□□□□ -0.24
LSG1-206ENST00000466391 TMUB1Q9BVT8 246 aa13.54□□□□□ -0.24
LSG1-206ENST00000466391 KDM4CQ9H3R0 1056 aa13.54□□□□□ -0.24
LSG1-206ENST00000466391 DAXXQ9UER7 740 aaPredicted RBP13.54□□□□□ -0.24
LSG1-206ENST00000466391 SAMD7Q7Z3H4 446 aa13.53□□□□□ -0.24
LSG1-206ENST00000466391 PCDH10Q9P2E7 1040 aa13.53□□□□□ -0.24
LSG1-206ENST00000466391 BICRAQ9NZM4 1560 aa13.52□□□□□ -0.25
LSG1-206ENST00000466391 TOP2AP11388 1531 aaKnown RBP13.5□□□□□ -0.25
LSG1-206ENST00000466391 SSTR3P32745 418 aaPredicted RBP13.49□□□□□ -0.25
LSG1-206ENST00000466391 FAM217BQ9NTX9 383 aaPredicted RBP13.49□□□□□ -0.25
LSG1-206ENST00000466391 DDX11L8A8MPP1 907 aa13.48□□□□□ -0.25
LSG1-206ENST00000466391 RNF40O75150 1001 aa13.48□□□□□ -0.25
LSG1-206ENST00000466391 ANKK1Q8NFD2 765 aa13.48□□□□□ -0.25
LSG1-206ENST00000466391 WNT2BQ93097 391 aa13.48□□□□□ -0.25
LSG1-206ENST00000466391 EIF4G1Q04637 1599 aaKnown RBP13.47□□□□□ -0.25
LSG1-206ENST00000466391 LRCH3Q96II8 777 aa13.47□□□□□ -0.25
LSG1-206ENST00000466391 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.47□□□□□ -0.25
LSG1-206ENST00000466391 MS4A1P11836 297 aa13.46□□□□□ -0.25
LSG1-206ENST00000466391 SLC4A3P48751 1232 aa13.46□□□□□ -0.25
LSG1-206ENST00000466391 SULF1Q8IWU6 871 aa13.46□□□□□ -0.25
LSG1-206ENST00000466391 SLF2Q8IX21 1173 aa13.45□□□□□ -0.26
LSG1-206ENST00000466391 PEG3Q9GZU2 1588 aa13.45□□□□□ -0.26
LSG1-206ENST00000466391 RDH13Q8NBN7 331 aa13.44□□□□□ -0.26
LSG1-206ENST00000466391 BCAMP50895 628 aa13.43□□□□□ -0.26
LSG1-206ENST00000466391 KCTD12Q96CX2 325 aaKnown RBP13.43□□□□□ -0.26
LSG1-206ENST00000466391 FAM117AQ9C073 453 aa13.42□□□□□ -0.26
LSG1-206ENST00000466391 SOWAHBA6NEL2 793 aa13.41□□□□□ -0.26
LSG1-206ENST00000466391 RSPH4AQ5TD94 716 aa13.41□□□□□ -0.26
LSG1-206ENST00000466391 MYT1LQ9UL68 1186 aa13.41□□□□□ -0.26
LSG1-206ENST00000466391 SLC10A3P09131 477 aa13.4□□□□□ -0.26
LSG1-206ENST00000466391 IL27Q8NEV9 243 aa13.4□□□□□ -0.26
LSG1-206ENST00000466391 BEGAINQ9BUH8 593 aa13.4□□□□□ -0.26
LSG1-206ENST00000466391 CD46P15529 392 aa13.39□□□□□ -0.27
LSG1-206ENST00000466391 SPNS2Q8IVW8 549 aa13.39□□□□□ -0.27
LSG1-206ENST00000466391 HPS5Q9UPZ3 1129 aa13.39□□□□□ -0.27
LSG1-206ENST00000466391 THSD4Q6ZMP0 1018 aa13.37□□□□□ -0.27
LSG1-206ENST00000466391 DDRGK1Q96HY6 314 aa13.37□□□□□ -0.27
LSG1-206ENST00000466391 SMARCA2P51531 1590 aa13.37□□□□□ -0.27
LSG1-206ENST00000466391 PPP4CP60510 307 aa13.36□□□□□ -0.27
LSG1-206ENST00000466391 TSR3Q9UJK0 312 aaKnown RBP13.35□□□□□ -0.27
LSG1-206ENST00000466391 PLEKHG3A1L390 1219 aa13.33□□□□□ -0.28
LSG1-206ENST00000466391 CFHP08603 1231 aa13.33□□□□□ -0.28
LSG1-206ENST00000466391 GCGRP47871 477 aa13.32□□□□□ -0.28
LSG1-206ENST00000466391 PTPN5P54829 565 aa13.32□□□□□ -0.28
LSG1-206ENST00000466391 NECTIN2Q92692 538 aa13.32□□□□□ -0.28
LSG1-206ENST00000466391 WBP1LQ9NX94 342 aa13.32□□□□□ -0.28
LSG1-206ENST00000466391 NUTM1Q86Y26 1132 aa13.31□□□□□ -0.28
LSG1-206ENST00000466391 CCDC88BA6NC98 1476 aa13.3□□□□□ -0.28
LSG1-206ENST00000466391 RNF166Q96A37 237 aaPredicted RBP13.3□□□□□ -0.28
LSG1-206ENST00000466391 KMT5BQ4FZB7 885 aa13.29□□□□□ -0.28
LSG1-206ENST00000466391 KDM4AO75164 1064 aa13.27□□□□□ -0.29
LSG1-206ENST00000466391 SPIRE2Q8WWL2 714 aa13.27□□□□□ -0.29
LSG1-206ENST00000466391 TBC1D2Q9BYX2 928 aa13.27□□□□□ -0.29
LSG1-206ENST00000466391 APLP1P51693 650 aa13.26□□□□□ -0.29
LSG1-206ENST00000466391 TMEM132AQ24JP5 1023 aa13.25□□□□□ -0.29
LSG1-206ENST00000466391 FUT2Q10981 343 aa13.24□□□□□ -0.29
LSG1-206ENST00000466391 DIXDC1Q155Q3 683 aa13.24□□□□□ -0.29
LSG1-206ENST00000466391 PRR14Q9BWN1 585 aa13.24□□□□□ -0.29
LSG1-206ENST00000466391 RSPH6AQ9H0K4 717 aa13.24□□□□□ -0.29
LSG1-206ENST00000466391 ACTN4O43707 911 aaKnown RBP13.22□□□□□ -0.29
LSG1-206ENST00000466391 MMRN1Q13201 1228 aa13.22□□□□□ -0.29
LSG1-206ENST00000466391 MYSM1Q5VVJ2 828 aa13.22□□□□□ -0.29
LSG1-206ENST00000466391 ATAD2BQ9ULI0 1458 aa13.22□□□□□ -0.29
LSG1-206ENST00000466391 USP46P62068 366 aa13.21□□□□□ -0.29
LSG1-206ENST00000466391 LOC105371045A0A1W2PR82 267 aa13.2□□□□□ -0.3
LSG1-206ENST00000466391 POLR3EQ9NVU0 708 aa13.2□□□□□ -0.3
LSG1-206ENST00000466391 MOXD2PA6NHM9 499 aa13.19□□□□□ -0.3
LSG1-206ENST00000466391 HOXA2O43364 376 aa13.19□□□□□ -0.3
LSG1-206ENST00000466391 NDUFV2P19404 249 aa13.19□□□□□ -0.3
LSG1-206ENST00000466391 ATP6V1AP38606 617 aa13.19□□□□□ -0.3
LSG1-206ENST00000466391 PUS10Q3MIT2 529 aaKnown RBP13.19□□□□□ -0.3
LSG1-206ENST00000466391 SH3D19Q5HYK7 790 aa13.19□□□□□ -0.3
LSG1-206ENST00000466391 NYAP1Q6ZVC0 841 aa13.19□□□□□ -0.3
LSG1-206ENST00000466391 ATP1B4Q9UN42 357 aaPredicted RBP13.19□□□□□ -0.3
LSG1-206ENST00000466391 GRIPAP1Q4V328 841 aa13.18□□□□□ -0.3
LSG1-206ENST00000466391 HLA-CQ95604 372 aa13.18□□□□□ -0.3
LSG1-206ENST00000466391 HCSTQ9UBK5 93 aa13.18□□□□□ -0.3
LSG1-206ENST00000466391 PCDHB3Q9Y5E6 796 aa13.18□□□□□ -0.3
LSG1-206ENST00000466391 SKIV2LQ15477 1246 aaKnown RBP13.17□□□□□ -0.3
LSG1-206ENST00000466391 RIC3Q7Z5B4 369 aa13.17□□□□□ -0.3
LSG1-206ENST00000466391 GUCA2AQ02747 115 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms