RNA–Protein interactions for RNA: ENST00000466175.5

LETM1-202, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-202ENST00000466175 POLR3GLQ9BT43 218 aa25.05■■□□□ 1.6
LETM1-202ENST00000466175 ABCC3O15438 1527 aa25.05■■□□□ 1.6
LETM1-202ENST00000466175 KIF1BO60333 1816 aa25.05■■□□□ 1.6
LETM1-202ENST00000466175 MRS2Q9HD23 443 aa25.04■■□□□ 1.6
LETM1-202ENST00000466175 CFAP65Q6ZU64 1925 aaKnown RBP25.03■■□□□ 1.6
LETM1-202ENST00000466175 HNRNPUQ00839 825 aaKnown RBP eCLIP25.01■■□□□ 1.59
LETM1-202ENST00000466175 SUPT16HQ9Y5B9 1047 aaKnown RBP25.01■■□□□ 1.59
LETM1-202ENST00000466175 MYOM2P54296 1465 aa25.01■■□□□ 1.59
LETM1-202ENST00000466175 ZC3H13Q5T200 1668 aaKnown RBP25.01■■□□□ 1.59
LETM1-202ENST00000466175 IQGAP1P46940 1657 aa25.01■■□□□ 1.59
LETM1-202ENST00000466175 FBXO31Q5XUX0 539 aaPredicted RBP25■■□□□ 1.59
LETM1-202ENST00000466175 SETD1BQ9UPS6 1966 aaKnown RBP24.99■■□□□ 1.59
LETM1-202ENST00000466175 CAMSAP1Q5T5Y3 1602 aa24.99■■□□□ 1.59
LETM1-202ENST00000466175 TMF1P82094 1093 aa24.97■■□□□ 1.59
LETM1-202ENST00000466175 TESK2Q96S53 571 aa24.97■■□□□ 1.59
LETM1-202ENST00000466175 RALBP1Q15311 655 aa24.97■■□□□ 1.59
LETM1-202ENST00000466175 PREX1Q8TCU6 1659 aa24.96■■□□□ 1.59
LETM1-202ENST00000466175 LMTK3Q96Q04 1460 aa24.96■■□□□ 1.59
LETM1-202ENST00000466175 SCAF11Q99590 1463 aaKnown RBP24.96■■□□□ 1.59
LETM1-202ENST00000466175 CCDC184Q52MB2 194 aa24.96■■□□□ 1.59
LETM1-202ENST00000466175 IFT172Q9UG01 1749 aa24.95■■□□□ 1.58
LETM1-202ENST00000466175 NPATQ14207 1427 aa24.94■■□□□ 1.58
LETM1-202ENST00000466175 SLC24A1O60721 1099 aa24.94■■□□□ 1.58
LETM1-202ENST00000466175 HSPA2P54652 639 aa24.94■■□□□ 1.58
LETM1-202ENST00000466175 PELP1Q8IZL8 1130 aaKnown RBP24.94■■□□□ 1.58
LETM1-202ENST00000466175 NEFLP07196 543 aa24.93■■□□□ 1.58
LETM1-202ENST00000466175 EIF3AQ14152 1382 aaKnown RBP24.93■■□□□ 1.58
LETM1-202ENST00000466175 ADGRB3O60242 1522 aa24.91■■□□□ 1.58
LETM1-202ENST00000466175 CDCA8Q53HL2 280 aa24.9■■□□□ 1.58
LETM1-202ENST00000466175 FAM9BQ8IZU0 186 aa24.9■■□□□ 1.58
LETM1-202ENST00000466175 ZBED9Q6R2W3 1325 aa24.89■■□□□ 1.58
LETM1-202ENST00000466175 BRD4O60885 1362 aaPredicted RBP24.89■■□□□ 1.57
LETM1-202ENST00000466175 DISP3Q9P2K9 1392 aa24.89■■□□□ 1.57
LETM1-202ENST00000466175 NRXN1Q9ULB1 1477 aa24.88■■□□□ 1.57
LETM1-202ENST00000466175 MYO3AQ8NEV4 1616 aa24.88■■□□□ 1.57
LETM1-202ENST00000466175 UGGT1Q9NYU2 1555 aa24.88■■□□□ 1.57
LETM1-202ENST00000466175 MYBBP1AQ9BQG0 1328 aaKnown RBP24.88■■□□□ 1.57
LETM1-202ENST00000466175 TNRQ92752 1358 aa24.88■■□□□ 1.57
LETM1-202ENST00000466175 ARHGAP31Q2M1Z3 1444 aa24.87■■□□□ 1.57
LETM1-202ENST00000466175 RPGRIP1LQ68CZ1 1315 aa24.85■■□□□ 1.57
LETM1-202ENST00000466175 ERVK-7P63135 1459 aa24.85■■□□□ 1.57
LETM1-202ENST00000466175 NOS1P29475 1434 aa24.83■■□□□ 1.57
LETM1-202ENST00000466175 SPATA31D1Q6ZQQ2 1576 aa24.83■■□□□ 1.57
LETM1-202ENST00000466175 PER1O15534 1290 aaPredicted RBP24.83■■□□□ 1.56
LETM1-202ENST00000466175 TMC1Q8TDI8 760 aa24.83■■□□□ 1.56
LETM1-202ENST00000466175 PARD3Q8TEW0 1356 aa24.82■■□□□ 1.56
LETM1-202ENST00000466175 SETBP1Q9Y6X0 1596 aa24.82■■□□□ 1.56
LETM1-202ENST00000466175 PPLO60437 1756 aa24.8■■□□□ 1.56
LETM1-202ENST00000466175 PIK3C2BO00750 1634 aa24.8■■□□□ 1.56
LETM1-202ENST00000466175 CEP170BQ9Y4F5 1589 aaPredicted RBP24.8■■□□□ 1.56
LETM1-202ENST00000466175 FKBP8Q14318 412 aa24.79■■□□□ 1.56
LETM1-202ENST00000466175 ZNF142P52746 1687 aaPredicted RBP24.79■■□□□ 1.56
LETM1-202ENST00000466175 SYNMO15061 1565 aa24.78■■□□□ 1.56
LETM1-202ENST00000466175 PNISRQ8TF01 805 aaKnown RBP24.78■■□□□ 1.56
LETM1-202ENST00000466175 NLRP13Q86W25 1043 aa24.77■■□□□ 1.56
LETM1-202ENST00000466175 ADGRF5Q8IZF2 1346 aa24.76■■□□□ 1.55
LETM1-202ENST00000466175 A2ML1A8K2U0 1454 aa24.75■■□□□ 1.55
LETM1-202ENST00000466175 PANK3Q9H999 370 aa24.75■■□□□ 1.55
LETM1-202ENST00000466175 LRPPRCP42704 1394 aaKnown RBP24.74■■□□□ 1.55
LETM1-202ENST00000466175 KDM5AP29375 1690 aaKnown RBP24.73■■□□□ 1.55
LETM1-202ENST00000466175 SBNO2Q9Y2G9 1366 aa24.73■■□□□ 1.55
LETM1-202ENST00000466175 NLRP1Q9C000 1473 aa24.73■■□□□ 1.55
LETM1-202ENST00000466175 PIK3C2GO75747 1445 aa24.73■■□□□ 1.55
LETM1-202ENST00000466175 CFAP70Q5T0N1 1121 aa24.72■■□□□ 1.55
LETM1-202ENST00000466175 INSRP06213 1382 aa24.71■■□□□ 1.55
LETM1-202ENST00000466175 ERICH6BQ5W0A0 696 aa24.71■■□□□ 1.55
LETM1-202ENST00000466175 CHGAP10645 457 aaKnown RBP24.7■■□□□ 1.54
LETM1-202ENST00000466175 SLC52A1Q9NWF4 448 aa24.7■■□□□ 1.54
LETM1-202ENST00000466175 CNGB1Q14028 1251 aaPredicted RBP24.69■■□□□ 1.54
LETM1-202ENST00000466175 STRCQ7RTU9 1775 aa24.69■■□□□ 1.54
LETM1-202ENST00000466175 IDI1Q13907 227 aa24.68■■□□□ 1.54
LETM1-202ENST00000466175 C14orf93Q9H972 538 aaKnown RBP24.68■■□□□ 1.54
LETM1-202ENST00000466175 NPC1L1Q9UHC9 1359 aa24.66■■□□□ 1.54
LETM1-202ENST00000466175 SMG6Q86US8 1419 aaKnown RBP24.66■■□□□ 1.54
LETM1-202ENST00000466175 UBR1Q8IWV7 1749 aa24.65■■□□□ 1.54
LETM1-202ENST00000466175 VGFO15240 615 aaPredicted RBP24.65■■□□□ 1.54
LETM1-202ENST00000466175 KNSTRNQ9Y448 316 aa24.65■■□□□ 1.54
LETM1-202ENST00000466175 MYOM1P52179 1685 aa24.65■■□□□ 1.54
LETM1-202ENST00000466175 ZFYVE9O95405 1425 aa24.65■■□□□ 1.54
LETM1-202ENST00000466175 NCKAP5LQ9HCH0 1330 aa24.64■■□□□ 1.54
LETM1-202ENST00000466175 STAG3Q9UJ98 1225 aa24.64■■□□□ 1.53
LETM1-202ENST00000466175 NEXMIFQ5QGS0 1516 aa24.63■■□□□ 1.53
LETM1-202ENST00000466175 THEMISQ8N1K5 641 aaPredicted RBP24.62■■□□□ 1.53
LETM1-202ENST00000466175 ADGRB1O14514 1584 aa24.62■■□□□ 1.53
LETM1-202ENST00000466175 ASXL1Q8IXJ9 1541 aa24.61■■□□□ 1.53
LETM1-202ENST00000466175 MYO5BQ9ULV0 1848 aa24.6■■□□□ 1.53
LETM1-202ENST00000466175 CENPJQ9HC77 1338 aaPredicted RBP24.6■■□□□ 1.53
LETM1-202ENST00000466175 CC2D1BQ5T0F9 858 aaKnown RBP24.6■■□□□ 1.53
LETM1-202ENST00000466175 NUDCQ9Y266 331 aa24.57■■□□□ 1.52
LETM1-202ENST00000466175 QRICH2Q9H0J4 1663 aa24.55■■□□□ 1.52
LETM1-202ENST00000466175 TMEM131LA2VDJ0 1609 aa24.55■■□□□ 1.52
LETM1-202ENST00000466175 AMER1Q5JTC6 1135 aaPredicted RBP24.55■■□□□ 1.52
LETM1-202ENST00000466175 PUS7Q96PZ0 661 aaKnown RBP24.54■■□□□ 1.52
LETM1-202ENST00000466175 ANKLE2Q86XL3 938 aa24.53■■□□□ 1.52
LETM1-202ENST00000466175 BCANQ96GW7 911 aa24.53■■□□□ 1.52
LETM1-202ENST00000466175 PDE3BQ13370 1112 aa24.51■■□□□ 1.51
LETM1-202ENST00000466175 BLMP54132 1417 aaPredicted RBP24.5■■□□□ 1.51
LETM1-202ENST00000466175 TMEM2Q9UHN6 1383 aa24.5■■□□□ 1.51
LETM1-202ENST00000466175 LTKP29376 864 aa24.5■■□□□ 1.51
LETM1-202ENST00000466175 SENP3Q9H4L4 574 aaPredicted RBP24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms