RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 KCNV2Q8TDN2 545 aa6.69□□□□□ -1.34
CCDC93-205ENST00000466171 MLLT3P42568 568 aaPredicted RBP6.68□□□□□ -1.34
CCDC93-205ENST00000466171 APLP1P51693 650 aa6.68□□□□□ -1.34
CCDC93-205ENST00000466171 PKDCCQ504Y2 493 aa6.68□□□□□ -1.34
CCDC93-205ENST00000466171 RBM46Q8TBY0 533 aaKnown RBP6.68□□□□□ -1.34
CCDC93-205ENST00000466171 NKX2-3Q8TAU0 364 aa6.67□□□□□ -1.34
CCDC93-205ENST00000466171 EYA1Q99502 592 aa6.67□□□□□ -1.34
CCDC93-205ENST00000466171 STK17AQ9UEE5 414 aa6.67□□□□□ -1.34
CCDC93-205ENST00000466171 NUTM2FA1L443 756 aa6.66□□□□□ -1.34
CCDC93-205ENST00000466171 DNAJB2P25686 324 aa6.66□□□□□ -1.34
CCDC93-205ENST00000466171 PTGDRQ13258 359 aa6.66□□□□□ -1.34
CCDC93-205ENST00000466171 DGAT1O75907 488 aa6.65□□□□□ -1.34
CCDC93-205ENST00000466171 COPS2P61201 443 aa6.65□□□□□ -1.34
CCDC93-205ENST00000466171 EMID1Q96A84 441 aaPredicted RBP6.65□□□□□ -1.34
CCDC93-205ENST00000466171 KMT5BQ4FZB7 885 aa6.64□□□□□ -1.35
CCDC93-205ENST00000466171 PCDHB3Q9Y5E6 796 aa6.64□□□□□ -1.35
CCDC93-205ENST00000466171 ST8SIA5O15466 376 aa6.63□□□□□ -1.35
CCDC93-205ENST00000466171 FCHSD2O94868 740 aa6.63□□□□□ -1.35
CCDC93-205ENST00000466171 TMUB1Q9BVT8 246 aa6.63□□□□□ -1.35
CCDC93-205ENST00000466171 ZPR1O75312 459 aa6.62□□□□□ -1.35
CCDC93-205ENST00000466171 SMYD5Q6GMV2 418 aa6.62□□□□□ -1.35
CCDC93-205ENST00000466171 WFS1O76024 890 aa6.61□□□□□ -1.35
CCDC93-205ENST00000466171 PRR20EP86478 221 aa6.61□□□□□ -1.35
CCDC93-205ENST00000466171 PRR20CP86479 221 aa6.61□□□□□ -1.35
CCDC93-205ENST00000466171 PRR20DP86480 221 aa6.61□□□□□ -1.35
CCDC93-205ENST00000466171 PRR20BP86481 221 aa6.61□□□□□ -1.35
CCDC93-205ENST00000466171 PRR20AP86496 221 aa6.61□□□□□ -1.35
CCDC93-205ENST00000466171 TMEM134Q9H6X4 195 aa6.61□□□□□ -1.35
CCDC93-205ENST00000466171 ADGRG1Q9Y653 693 aa6.61□□□□□ -1.35
CCDC93-205ENST00000466171 RCCD1A6NED2 376 aa6.6□□□□□ -1.35
CCDC93-205ENST00000466171 FAM187AA6NFU0 413 aa6.6□□□□□ -1.35
CCDC93-205ENST00000466171 WIPF1O43516 503 aa6.6□□□□□ -1.35
CCDC93-205ENST00000466171 RSPH4AQ5TD94 716 aa6.6□□□□□ -1.35
CCDC93-205ENST00000466171 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.59□□□□□ -1.35
CCDC93-205ENST00000466171 OATP04181 439 aa6.59□□□□□ -1.35
CCDC93-205ENST00000466171 NFX1Q12986 1120 aaKnown RBP6.59□□□□□ -1.35
CCDC93-205ENST00000466171 AAASQ9NRG9 546 aa6.59□□□□□ -1.35
CCDC93-205ENST00000466171 SEMA3EO15041 775 aa6.58□□□□□ -1.36
CCDC93-205ENST00000466171 ACTN4O43707 911 aaKnown RBP6.58□□□□□ -1.36
CCDC93-205ENST00000466171 LCE2CQ5TA81 110 aa6.58□□□□□ -1.36
CCDC93-205ENST00000466171 BLOC1S3Q6QNY0 202 aa6.58□□□□□ -1.36
CCDC93-205ENST00000466171 CFHP08603 1231 aa6.57□□□□□ -1.36
CCDC93-205ENST00000466171 SLC19A1P41440 591 aa6.57□□□□□ -1.36
CCDC93-205ENST00000466171 HIC1Q14526 733 aa6.57□□□□□ -1.36
CCDC93-205ENST00000466171 NR1I2O75469 434 aa6.56□□□□□ -1.36
CCDC93-205ENST00000466171 INSM1Q01101 510 aaPredicted RBP6.56□□□□□ -1.36
CCDC93-205ENST00000466171 SPRYD7Q5W111 196 aa6.56□□□□□ -1.36
CCDC93-205ENST00000466171 RNF223E7ERA6 249 aa6.55□□□□□ -1.36
CCDC93-205ENST00000466171 TNFRSF10AO00220 468 aa6.55□□□□□ -1.36
CCDC93-205ENST00000466171 PLCB2Q00722 1185 aa6.55□□□□□ -1.36
CCDC93-205ENST00000466171 FAM161AQ3B820 660 aa6.55□□□□□ -1.36
CCDC93-205ENST00000466171 ZNF598Q86UK7 904 aaKnown RBP6.55□□□□□ -1.36
CCDC93-205ENST00000466171 GDF9O60383 454 aa6.54□□□□□ -1.36
CCDC93-205ENST00000466171 PXYLP1Q8TE99 480 aa6.54□□□□□ -1.36
CCDC93-205ENST00000466171 DACH1Q9UI36 760 aa6.54□□□□□ -1.36
CCDC93-205ENST00000466171 TESPA1A2RU30 521 aaPredicted RBP6.53□□□□□ -1.36
CCDC93-205ENST00000466171 ZNF697Q5TEC3 545 aa6.53□□□□□ -1.36
CCDC93-205ENST00000466171 ANKLE1Q8NAG6 615 aa6.53□□□□□ -1.36
CCDC93-205ENST00000466171 GNPATO15228 680 aa6.52□□□□□ -1.37
CCDC93-205ENST00000466171 TLL1O43897 1013 aa6.52□□□□□ -1.37
CCDC93-205ENST00000466171 ADH1BP00325 375 aa6.52□□□□□ -1.37
CCDC93-205ENST00000466171 SLC10A3P09131 477 aa6.52□□□□□ -1.37
CCDC93-205ENST00000466171 S1PR4O95977 384 aa6.51□□□□□ -1.37
CCDC93-205ENST00000466171 RBM26Q5T8P6 1007 aaKnown RBP6.51□□□□□ -1.37
CCDC93-205ENST00000466171 METTL3Q86U44 580 aaKnown RBP6.51□□□□□ -1.37
CCDC93-205ENST00000466171 GMPR2Q9P2T1 348 aaKnown RBP6.51□□□□□ -1.37
CCDC93-205ENST00000466171 LIAT1Q6ZQX7 453 aa6.5□□□□□ -1.37
CCDC93-205ENST00000466171 CRIPAKQ8N1N5 446 aa6.5□□□□□ -1.37
CCDC93-205ENST00000466171 RDH13Q8NBN7 331 aa6.5□□□□□ -1.37
CCDC93-205ENST00000466171 SLC6A16Q9GZN6 736 aa6.5□□□□□ -1.37
CCDC93-205ENST00000466171 DAXXQ9UER7 740 aaPredicted RBP6.5□□□□□ -1.37
CCDC93-205ENST00000466171 SULF1Q8IWU6 871 aa6.49□□□□□ -1.37
CCDC93-205ENST00000466171 HAP1P54257 671 aaPredicted RBP6.48□□□□□ -1.37
CCDC93-205ENST00000466171 SCUBE3Q8IX30 993 aa6.48□□□□□ -1.37
CCDC93-205ENST00000466171 TULP1O00294 542 aaPredicted RBP6.47□□□□□ -1.37
CCDC93-205ENST00000466171 PPEF1O14829 653 aaPredicted RBP6.47□□□□□ -1.37
CCDC93-205ENST00000466171 PUS10Q3MIT2 529 aaKnown RBP6.47□□□□□ -1.37
CCDC93-205ENST00000466171 SPSB2Q99619 263 aa6.47□□□□□ -1.37
CCDC93-205ENST00000466171 DDX11L8A8MPP1 907 aa6.46□□□□□ -1.38
CCDC93-205ENST00000466171 C11orf95C9JLR9 678 aaPredicted RBP6.46□□□□□ -1.38
CCDC93-205ENST00000466171 SUZ12Q15022 739 aaKnown RBP6.46□□□□□ -1.38
CCDC93-205ENST00000466171 GPIHBP1Q8IV16 184 aa6.46□□□□□ -1.38
CCDC93-205ENST00000466171 ATP6V1AP38606 617 aa6.45□□□□□ -1.38
CCDC93-205ENST00000466171 GRIPAP1Q4V328 841 aa6.45□□□□□ -1.38
CCDC93-205ENST00000466171 FMNL1O95466 1100 aaPredicted RBP6.44□□□□□ -1.38
CCDC93-205ENST00000466171 FECHP22830 423 aa6.44□□□□□ -1.38
CCDC93-205ENST00000466171 PKD2L1Q9P0L9 805 aa6.44□□□□□ -1.38
CCDC93-205ENST00000466171 AVPP01185 164 aa6.43□□□□□ -1.38
CCDC93-205ENST00000466171 FUT2Q10981 343 aa6.43□□□□□ -1.38
CCDC93-205ENST00000466171 PLA2G2CQ5R387 149 aa6.43□□□□□ -1.38
CCDC93-205ENST00000466171 MORN1Q5T089 497 aa6.43□□□□□ -1.38
CCDC93-205ENST00000466171 GPR37O15354 613 aa6.42□□□□□ -1.38
CCDC93-205ENST00000466171 GCGRP47871 477 aa6.42□□□□□ -1.38
CCDC93-205ENST00000466171 LMOD2Q6P5Q4 547 aa6.42□□□□□ -1.38
CCDC93-205ENST00000466171 CD2BP2O95400 341 aaKnown RBP6.41□□□□□ -1.38
CCDC93-205ENST00000466171 LORP23490 312 aaPredicted RBP6.41□□□□□ -1.38
CCDC93-205ENST00000466171 TERTO14746 1132 aaKnown RBP6.4□□□□□ -1.38
CCDC93-205ENST00000466171 AXIN1O15169 862 aa6.4□□□□□ -1.38
CCDC93-205ENST00000466171 ZBTB24O43167 697 aaPredicted RBP6.4□□□□□ -1.38
CCDC93-205ENST00000466171 RPIAP49247 311 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms