RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 ZNF598Q86UK7 904 aaKnown RBP11.65□□□□□ -0.54
LRCH3-211ENST00000466054 TLL1O43897 1013 aa11.64□□□□□ -0.55
LRCH3-211ENST00000466054 MYT1Q01538 1121 aa11.64□□□□□ -0.55
LRCH3-211ENST00000466054 TRIM67Q6ZTA4 783 aa11.64□□□□□ -0.55
LRCH3-211ENST00000466054 ANKLE1Q8NAG6 615 aa11.64□□□□□ -0.55
LRCH3-211ENST00000466054 EYA1Q99502 592 aa11.64□□□□□ -0.55
LRCH3-211ENST00000466054 RTN4Q9NQC3 1192 aaKnown RBP11.64□□□□□ -0.55
LRCH3-211ENST00000466054 NPDC1Q9NQX5 325 aaPredicted RBP11.64□□□□□ -0.55
LRCH3-211ENST00000466054 ZNF697Q5TEC3 545 aa11.63□□□□□ -0.55
LRCH3-211ENST00000466054 DNAJB2P25686 324 aa11.62□□□□□ -0.55
LRCH3-211ENST00000466054 S1PR4O95977 384 aa11.61□□□□□ -0.55
LRCH3-211ENST00000466054 PRR20EP86478 221 aa11.61□□□□□ -0.55
LRCH3-211ENST00000466054 PRR20CP86479 221 aa11.61□□□□□ -0.55
LRCH3-211ENST00000466054 PRR20DP86480 221 aa11.61□□□□□ -0.55
LRCH3-211ENST00000466054 PRR20BP86481 221 aa11.61□□□□□ -0.55
LRCH3-211ENST00000466054 PRR20AP86496 221 aa11.61□□□□□ -0.55
LRCH3-211ENST00000466054 RBM46Q8TBY0 533 aaKnown RBP11.61□□□□□ -0.55
LRCH3-211ENST00000466054 CFAP44Q96MT7 982 aa11.61□□□□□ -0.55
LRCH3-211ENST00000466054 TNFRSF10AO00220 468 aa11.6□□□□□ -0.55
LRCH3-211ENST00000466054 PPEF1O14829 653 aaPredicted RBP11.59□□□□□ -0.55
LRCH3-211ENST00000466054 CFHP08603 1231 aa11.57□□□□□ -0.56
LRCH3-211ENST00000466054 PAXIP1Q6ZW49 1069 aaPredicted RBP11.57□□□□□ -0.56
LRCH3-211ENST00000466054 ACTN4O43707 911 aaKnown RBP11.56□□□□□ -0.56
LRCH3-211ENST00000466054 NR1I2O75469 434 aa11.56□□□□□ -0.56
LRCH3-211ENST00000466054 EMID1Q96A84 441 aaPredicted RBP11.56□□□□□ -0.56
LRCH3-211ENST00000466054 LIAT1Q6ZQX7 453 aa11.55□□□□□ -0.56
LRCH3-211ENST00000466054 TMEM134Q9H6X4 195 aa11.55□□□□□ -0.56
LRCH3-211ENST00000466054 POTECB2RU33 542 aa11.54□□□□□ -0.56
LRCH3-211ENST00000466054 ADH1BP00325 375 aa11.54□□□□□ -0.56
LRCH3-211ENST00000466054 SLC6A16Q9GZN6 736 aa11.52□□□□□ -0.57
LRCH3-211ENST00000466054 RCCD1A6NED2 376 aa11.5□□□□□ -0.57
LRCH3-211ENST00000466054 ST8SIA5O15466 376 aa11.5□□□□□ -0.57
LRCH3-211ENST00000466054 GDF9O60383 454 aa11.5□□□□□ -0.57
LRCH3-211ENST00000466054 FOXC1Q12948 553 aa11.49□□□□□ -0.57
LRCH3-211ENST00000466054 ADGRG1Q9Y653 693 aa11.49□□□□□ -0.57
LRCH3-211ENST00000466054 NUTM2FA1L443 756 aa11.48□□□□□ -0.57
LRCH3-211ENST00000466054 PTGDRQ13258 359 aa11.48□□□□□ -0.57
LRCH3-211ENST00000466054 RSPH4AQ5TD94 716 aa11.47□□□□□ -0.57
LRCH3-211ENST00000466054 TREML4Q6UXN2 200 aa11.47□□□□□ -0.57
LRCH3-211ENST00000466054 AAASQ9NRG9 546 aa11.47□□□□□ -0.57
LRCH3-211ENST00000466054 MLLT3P42568 568 aaPredicted RBP11.46□□□□□ -0.57
LRCH3-211ENST00000466054 FAM161AQ3B820 660 aa11.44□□□□□ -0.58
LRCH3-211ENST00000466054 LMOD2Q6P5Q4 547 aa11.44□□□□□ -0.58
LRCH3-211ENST00000466054 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.43□□□□□ -0.58
LRCH3-211ENST00000466054 SPSB2Q99619 263 aa11.43□□□□□ -0.58
LRCH3-211ENST00000466054 SCUBE3Q8IX30 993 aa11.42□□□□□ -0.58
LRCH3-211ENST00000466054 ARHGEF1Q92888 912 aaKnown RBP11.42□□□□□ -0.58
LRCH3-211ENST00000466054 PLA2G2CQ5R387 149 aa11.41□□□□□ -0.58
LRCH3-211ENST00000466054 SLC10A3P09131 477 aa11.4□□□□□ -0.58
LRCH3-211ENST00000466054 CYP4X1Q8N118 509 aa11.4□□□□□ -0.58
LRCH3-211ENST00000466054 PUS10Q3MIT2 529 aaKnown RBP11.39□□□□□ -0.59
LRCH3-211ENST00000466054 C11orf95C9JLR9 678 aaPredicted RBP11.38□□□□□ -0.59
LRCH3-211ENST00000466054 FCHSD2O94868 740 aa11.38□□□□□ -0.59
LRCH3-211ENST00000466054 CD2BP2O95400 341 aaKnown RBP11.38□□□□□ -0.59
LRCH3-211ENST00000466054 PKD2L1Q9P0L9 805 aa11.38□□□□□ -0.59
LRCH3-211ENST00000466054 AXIN1O15169 862 aa11.37□□□□□ -0.59
LRCH3-211ENST00000466054 OATP04181 439 aa11.37□□□□□ -0.59
LRCH3-211ENST00000466054 WFS1O76024 890 aa11.36□□□□□ -0.59
LRCH3-211ENST00000466054 RPIAP49247 311 aa11.36□□□□□ -0.59
LRCH3-211ENST00000466054 CRIPAKQ8N1N5 446 aa11.35□□□□□ -0.59
LRCH3-211ENST00000466054 FCF1Q9Y324 198 aaKnown RBP11.34□□□□□ -0.59
LRCH3-211ENST00000466054 CTC1Q2NKJ3 1217 aa11.33□□□□□ -0.6
LRCH3-211ENST00000466054 RDH13Q8NBN7 331 aa11.33□□□□□ -0.6
LRCH3-211ENST00000466054 TTC24A2A3L6 582 aaPredicted RBP11.32□□□□□ -0.6
LRCH3-211ENST00000466054 GMPR2Q9P2T1 348 aaKnown RBP11.32□□□□□ -0.6
LRCH3-211ENST00000466054 ZBTB24O43167 697 aaPredicted RBP11.31□□□□□ -0.6
LRCH3-211ENST00000466054 KCNV2Q8TDN2 545 aa11.31□□□□□ -0.6
LRCH3-211ENST00000466054 PXYLP1Q8TE99 480 aa11.31□□□□□ -0.6
LRCH3-211ENST00000466054 DACH1Q9UI36 760 aa11.31□□□□□ -0.6
LRCH3-211ENST00000466054 TOR4AQ9NXH8 423 aa11.3□□□□□ -0.6
LRCH3-211ENST00000466054 AVPP01185 164 aa11.29□□□□□ -0.6
LRCH3-211ENST00000466054 LCE2AQ5TA79 106 aaPredicted RBP11.29□□□□□ -0.6
LRCH3-211ENST00000466054 FMNL1O95466 1100 aaPredicted RBP11.28□□□□□ -0.6
LRCH3-211ENST00000466054 STK17AQ9UEE5 414 aa11.28□□□□□ -0.6
LRCH3-211ENST00000466054 INSM1Q01101 510 aaPredicted RBP11.27□□□□□ -0.61
LRCH3-211ENST00000466054 METTL3Q86U44 580 aaKnown RBP11.26□□□□□ -0.61
LRCH3-211ENST00000466054 FUT2Q10981 343 aa11.25□□□□□ -0.61
LRCH3-211ENST00000466054 MORN1Q5T089 497 aa11.25□□□□□ -0.61
LRCH3-211ENST00000466054 DDX11L8A8MPP1 907 aa11.24□□□□□ -0.61
LRCH3-211ENST00000466054 ATP6V1AP38606 617 aa11.24□□□□□ -0.61
LRCH3-211ENST00000466054 HIC1Q14526 733 aa11.24□□□□□ -0.61
LRCH3-211ENST00000466054 SMCPP49901 116 aaPredicted RBP11.23□□□□□ -0.61
LRCH3-211ENST00000466054 P3H3Q8IVL6 736 aa11.22□□□□□ -0.61
LRCH3-211ENST00000466054 DAXXQ9UER7 740 aaPredicted RBP11.22□□□□□ -0.61
LRCH3-211ENST00000466054 SLC27A5Q9Y2P5 690 aa11.21□□□□□ -0.61
LRCH3-211ENST00000466054 THAP11Q96EK4 314 aa11.2□□□□□ -0.62
LRCH3-211ENST00000466054 PRDM9Q9NQV7 894 aa11.2□□□□□ -0.62
LRCH3-211ENST00000466054 NFX1Q12986 1120 aaKnown RBP11.19□□□□□ -0.62
LRCH3-211ENST00000466054 SULF1Q8IWU6 871 aa11.19□□□□□ -0.62
LRCH3-211ENST00000466054 FAM160A2Q8N612 972 aaPredicted RBP11.19□□□□□ -0.62
LRCH3-211ENST00000466054 SNIP1Q8TAD8 396 aaKnown RBP11.19□□□□□ -0.62
LRCH3-211ENST00000466054 SENP2Q9HC62 589 aa11.19□□□□□ -0.62
LRCH3-211ENST00000466054 FECHP22830 423 aa11.18□□□□□ -0.62
LRCH3-211ENST00000466054 GRIPAP1Q4V328 841 aa11.18□□□□□ -0.62
LRCH3-211ENST00000466054 TSHZ2Q9NRE2 1034 aa11.18□□□□□ -0.62
LRCH3-211ENST00000466054 SEMA3EO15041 775 aa11.17□□□□□ -0.62
LRCH3-211ENST00000466054 WIPF1O43516 503 aa11.17□□□□□ -0.62
LRCH3-211ENST00000466054 ATP13A2Q9NQ11 1180 aa11.17□□□□□ -0.62
LRCH3-211ENST00000466054 WNT7AO00755 349 aa11.16□□□□□ -0.62
LRCH3-211ENST00000466054 SALL2Q9Y467 1007 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms