RNA–Protein interactions for RNA: ENST00000466045.1

CDHR3-203, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-203ENST00000466045 DNAJC2Q99543 621 aaKnown RBP12.03□□□□□ -0.48
CDHR3-203ENST00000466045 DIP2BQ9P265 1576 aa12.03□□□□□ -0.48
CDHR3-203ENST00000466045 AXDND1Q5T1B0 1012 aaPredicted RBP12.03□□□□□ -0.48
CDHR3-203ENST00000466045 YY1AP1Q9H869 796 aa12.03□□□□□ -0.48
CDHR3-203ENST00000466045 PLPPR3Q6T4P5 718 aa12.02□□□□□ -0.49
CDHR3-203ENST00000466045 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.02□□□□□ -0.49
CDHR3-203ENST00000466045 FBXO3Q9UK99 471 aa12.01□□□□□ -0.49
CDHR3-203ENST00000466045 ZNF622Q969S3 477 aaKnown RBP eCLIP12.01□□□□□ -0.49
CDHR3-203ENST00000466045 DNMT1P26358 1616 aaKnown RBP12□□□□□ -0.49
CDHR3-203ENST00000466045 PRKRIP1Q9H875 184 aaPredicted RBP12□□□□□ -0.49
CDHR3-203ENST00000466045 GLI2P10070 1586 aa12□□□□□ -0.49
CDHR3-203ENST00000466045 FAM161AQ3B820 660 aa12□□□□□ -0.49
CDHR3-203ENST00000466045 ANTXR1Q9H6X2 564 aa12□□□□□ -0.49
CDHR3-203ENST00000466045 ROCK1Q13464 1354 aa12□□□□□ -0.49
CDHR3-203ENST00000466045 DENND4BO75064 1496 aaPredicted RBP12□□□□□ -0.49
CDHR3-203ENST00000466045 UQCRHLA0A096LP55 91 aa11.99□□□□□ -0.49
CDHR3-203ENST00000466045 UQCRHP07919 91 aa11.99□□□□□ -0.49
CDHR3-203ENST00000466045 RRP1P56182 461 aaKnown RBP11.99□□□□□ -0.49
CDHR3-203ENST00000466045 PPP1R9BQ96SB3 815 aa11.99□□□□□ -0.49
CDHR3-203ENST00000466045 HIRIP3Q9BW71 556 aaPredicted RBP11.99□□□□□ -0.49
CDHR3-203ENST00000466045 HDAC5Q9UQL6 1122 aa11.99□□□□□ -0.49
CDHR3-203ENST00000466045 KDM6BO15054 1643 aa11.99□□□□□ -0.49
CDHR3-203ENST00000466045 TROQ12816 1431 aaPredicted RBP11.99□□□□□ -0.49
CDHR3-203ENST00000466045 CD109Q6YHK3 1445 aa11.99□□□□□ -0.49
CDHR3-203ENST00000466045 IRX5P78411 483 aaPredicted RBP11.99□□□□□ -0.49
CDHR3-203ENST00000466045 C14orf37Q86TY3 774 aa11.99□□□□□ -0.49
CDHR3-203ENST00000466045 FAM9BQ8IZU0 186 aa11.99□□□□□ -0.49
CDHR3-203ENST00000466045 RRP7BPQ9NSQ0 103 aa11.99□□□□□ -0.49
CDHR3-203ENST00000466045 C8orf34Q49A92 452 aa11.98□□□□□ -0.49
CDHR3-203ENST00000466045 GRIPAP1Q4V328 841 aa11.98□□□□□ -0.49
CDHR3-203ENST00000466045 KIF13AQ9H1H9 1805 aa11.98□□□□□ -0.49
CDHR3-203ENST00000466045 ZNF500O60304 480 aaPredicted RBP11.98□□□□□ -0.49
CDHR3-203ENST00000466045 EXOC6Q8TAG9 804 aa11.98□□□□□ -0.49
CDHR3-203ENST00000466045 MRS2Q9HD23 443 aa11.98□□□□□ -0.49
CDHR3-203ENST00000466045 SLC52A1Q9NWF4 448 aa11.98□□□□□ -0.49
CDHR3-203ENST00000466045 DAPK1P53355 1430 aa11.97□□□□□ -0.49
CDHR3-203ENST00000466045 HS1BP3Q53T59 392 aa11.97□□□□□ -0.49
CDHR3-203ENST00000466045 CCDC173Q0VFZ6 552 aa11.97□□□□□ -0.49
CDHR3-203ENST00000466045 GEMIN8Q9NWZ8 242 aaKnown RBP11.97□□□□□ -0.49
CDHR3-203ENST00000466045 ITSN2Q9NZM3 1697 aa11.97□□□□□ -0.49
CDHR3-203ENST00000466045 CHIC2Q9UKJ5 165 aa11.96□□□□□ -0.49
CDHR3-203ENST00000466045 PTMSP20962 102 aa11.96□□□□□ -0.5
CDHR3-203ENST00000466045 WWC1Q8IX03 1113 aa11.96□□□□□ -0.5
CDHR3-203ENST00000466045 MCM4P33991 863 aa11.95□□□□□ -0.5
CDHR3-203ENST00000466045 R3HCC1Q9Y3T6 440 aaKnown RBP11.95□□□□□ -0.5
CDHR3-203ENST00000466045 KTN1Q86UP2 1357 aaKnown RBP11.95□□□□□ -0.5
CDHR3-203ENST00000466045 ABCC5O15440 1437 aa11.95□□□□□ -0.5
CDHR3-203ENST00000466045 SOX12O15370 315 aa11.94□□□□□ -0.5
CDHR3-203ENST00000466045 PTMAP06454 111 aaKnown RBP11.94□□□□□ -0.5
CDHR3-203ENST00000466045 BECN1Q14457 450 aa11.94□□□□□ -0.5
CDHR3-203ENST00000466045 ZBTB22O15209 634 aa11.93□□□□□ -0.5
CDHR3-203ENST00000466045 MPHOSPH9Q99550 1183 aa11.93□□□□□ -0.5
CDHR3-203ENST00000466045 CGNQ9P2M7 1197 aaKnown RBP11.93□□□□□ -0.5
CDHR3-203ENST00000466045 ADGBQ8N7X0 1667 aa11.93□□□□□ -0.5
CDHR3-203ENST00000466045 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.93□□□□□ -0.5
CDHR3-203ENST00000466045 MSNP26038 577 aaKnown RBP11.93□□□□□ -0.5
CDHR3-203ENST00000466045 FAM193AP78312 1265 aa11.93□□□□□ -0.5
CDHR3-203ENST00000466045 CSPP1Q1MSJ5 1256 aa11.93□□□□□ -0.5
CDHR3-203ENST00000466045 ABCA9Q8IUA7 1624 aa11.92□□□□□ -0.5
CDHR3-203ENST00000466045 MAP3K4Q9Y6R4 1608 aa11.92□□□□□ -0.5
CDHR3-203ENST00000466045 POLR1AO95602 1720 aaPredicted RBP11.92□□□□□ -0.5
CDHR3-203ENST00000466045 SASS6Q6UVJ0 657 aa11.92□□□□□ -0.5
CDHR3-203ENST00000466045 TMC1Q8TDI8 760 aa11.92□□□□□ -0.5
CDHR3-203ENST00000466045 TEX14Q8IWB6 1497 aa11.92□□□□□ -0.5
CDHR3-203ENST00000466045 KDM2BQ8NHM5 1336 aa11.91□□□□□ -0.5
CDHR3-203ENST00000466045 KIF14Q15058 1648 aa11.91□□□□□ -0.5
CDHR3-203ENST00000466045 TSPOAP1O95153 1857 aa11.91□□□□□ -0.5
CDHR3-203ENST00000466045 TRAK2O60296 914 aa11.91□□□□□ -0.5
CDHR3-203ENST00000466045 CROCC2H7BZ55 1655 aa11.9□□□□□ -0.5
CDHR3-203ENST00000466045 SCAPERQ9BY12 1400 aa11.9□□□□□ -0.5
CDHR3-203ENST00000466045 TSPYL1Q9H0U9 437 aa11.9□□□□□ -0.5
CDHR3-203ENST00000466045 PLCH2O75038 1416 aa11.9□□□□□ -0.5
CDHR3-203ENST00000466045 TULP2O00295 520 aa11.9□□□□□ -0.51
CDHR3-203ENST00000466045 RALBP1Q15311 655 aa11.9□□□□□ -0.51
CDHR3-203ENST00000466045 ARID3AQ99856 593 aa11.9□□□□□ -0.51
CDHR3-203ENST00000466045 CAMSAP2Q08AD1 1489 aa11.89□□□□□ -0.51
CDHR3-203ENST00000466045 ANKRD30BQ9BXX2 1392 aa11.89□□□□□ -0.51
CDHR3-203ENST00000466045 E9PSI1 815 aa11.89□□□□□ -0.51
CDHR3-203ENST00000466045 EFCAB2Q5VUJ9 269 aa11.89□□□□□ -0.51
CDHR3-203ENST00000466045 RPRD2Q5VT52 1461 aaKnown RBP11.89□□□□□ -0.51
CDHR3-203ENST00000466045 USP19O94966 1318 aa11.89□□□□□ -0.51
CDHR3-203ENST00000466045 TTC37Q6PGP7 1564 aa11.89□□□□□ -0.51
CDHR3-203ENST00000466045 MYCNP04198 464 aaPredicted RBP11.89□□□□□ -0.51
CDHR3-203ENST00000466045 GPATCH8Q9UKJ3 1502 aaKnown RBP11.89□□□□□ -0.51
CDHR3-203ENST00000466045 ADGRL2O95490 1459 aa11.88□□□□□ -0.51
CDHR3-203ENST00000466045 NINLQ9Y2I6 1382 aa11.88□□□□□ -0.51
CDHR3-203ENST00000466045 MCM5P33992 734 aa11.88□□□□□ -0.51
CDHR3-203ENST00000466045 NBPF1Q3BBV0 1214 aa11.88□□□□□ -0.51
CDHR3-203ENST00000466045 NOL7Q9UMY1 257 aaKnown RBP11.88□□□□□ -0.51
CDHR3-203ENST00000466045 EIF4G2P78344 907 aaKnown RBP eCLIP11.87□□□□□ -0.51
CDHR3-203ENST00000466045 PHF14O94880 888 aa11.87□□□□□ -0.51
CDHR3-203ENST00000466045 APPP05067 770 aa11.87□□□□□ -0.51
CDHR3-203ENST00000466045 PPRC1Q5VV67 1664 aaKnown RBP11.87□□□□□ -0.51
CDHR3-203ENST00000466045 ZNF644Q9H582 1327 aaPredicted RBP11.87□□□□□ -0.51
CDHR3-203ENST00000466045 FANCAO15360 1455 aa11.87□□□□□ -0.51
CDHR3-203ENST00000466045 NCOA1Q15788 1441 aa11.86□□□□□ -0.51
CDHR3-203ENST00000466045 DDX11L8A8MPP1 907 aa11.86□□□□□ -0.51
CDHR3-203ENST00000466045 GTF2F1P35269 517 aaKnown RBP eCLIP11.86□□□□□ -0.51
CDHR3-203ENST00000466045 CBX1P83916 185 aa11.86□□□□□ -0.51
CDHR3-203ENST00000466045 CFDP1Q9UEE9 299 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms