RNA–Protein interactions for RNA: ENST00000465705.3

TMCO1-204, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 5

Gene TMCO1, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-204ENST00000465705 ZBTB12Q9Y330 459 aaPredicted RBP16.71■□□□□ 0.27
TMCO1-204ENST00000465705 SLC52A1Q9NWF4 448 aa16.7■□□□□ 0.26
TMCO1-204ENST00000465705 PIK3C2BO00750 1634 aa16.7■□□□□ 0.26
TMCO1-204ENST00000465705 TRPM2O94759 1503 aa16.69■□□□□ 0.26
TMCO1-204ENST00000465705 PTPRTO14522 1441 aa16.69■□□□□ 0.26
TMCO1-204ENST00000465705 UBR1Q8IWV7 1749 aa16.67■□□□□ 0.26
TMCO1-204ENST00000465705 ADGRB3O60242 1522 aa16.67■□□□□ 0.26
TMCO1-204ENST00000465705 KDM5AP29375 1690 aaKnown RBP16.67■□□□□ 0.26
TMCO1-204ENST00000465705 IDI1Q13907 227 aa16.67■□□□□ 0.26
TMCO1-204ENST00000465705 STAG3Q9UJ98 1225 aa16.67■□□□□ 0.26
TMCO1-204ENST00000465705 PLA2R1Q13018 1463 aa16.67■□□□□ 0.26
TMCO1-204ENST00000465705 THEMISQ8N1K5 641 aaPredicted RBP16.65■□□□□ 0.26
TMCO1-204ENST00000465705 CLTCL1P53675 1640 aa16.64■□□□□ 0.25
TMCO1-204ENST00000465705 CHGAP10645 457 aaKnown RBP16.62■□□□□ 0.25
TMCO1-204ENST00000465705 PCGF6Q9BYE7 350 aa16.62■□□□□ 0.25
TMCO1-204ENST00000465705 TMEM131LA2VDJ0 1609 aa16.62■□□□□ 0.25
TMCO1-204ENST00000465705 STRCQ7RTU9 1775 aa16.61■□□□□ 0.25
TMCO1-204ENST00000465705 CCDC144AA2RUR9 1427 aa16.61■□□□□ 0.25
TMCO1-204ENST00000465705 POLR1AO95602 1720 aaPredicted RBP16.6■□□□□ 0.25
TMCO1-204ENST00000465705 SLIT1O75093 1534 aa16.6■□□□□ 0.25
TMCO1-204ENST00000465705 RBM42Q9BTD8 480 aaKnown RBP16.59■□□□□ 0.25
TMCO1-204ENST00000465705 TMEM2Q9UHN6 1383 aa16.59■□□□□ 0.25
TMCO1-204ENST00000465705 ARHGAP23Q9P227 1491 aa16.59■□□□□ 0.25
TMCO1-204ENST00000465705 MYO5BQ9ULV0 1848 aa16.59■□□□□ 0.25
TMCO1-204ENST00000465705 ANKLE2Q86XL3 938 aa16.58■□□□□ 0.24
TMCO1-204ENST00000465705 KIF1BO60333 1816 aa16.58■□□□□ 0.24
TMCO1-204ENST00000465705 SCAF11Q99590 1463 aaKnown RBP16.57■□□□□ 0.24
TMCO1-204ENST00000465705 NCKAP5LQ9HCH0 1330 aa16.57■□□□□ 0.24
TMCO1-204ENST00000465705 ILDR1Q86SU0 546 aaPredicted RBP16.57■□□□□ 0.24
TMCO1-204ENST00000465705 EID1Q9Y6B2 187 aa16.56■□□□□ 0.24
TMCO1-204ENST00000465705 NEURL4Q96JN8 1562 aa16.55■□□□□ 0.24
TMCO1-204ENST00000465705 ANKRD30BQ9BXX2 1392 aa16.54■□□□□ 0.24
TMCO1-204ENST00000465705 TXNDC2Q86VQ3 553 aa16.54■□□□□ 0.24
TMCO1-204ENST00000465705 RIMS2Q9UQ26 1411 aa16.53■□□□□ 0.24
TMCO1-204ENST00000465705 ZNF326Q5BKZ1 582 aaKnown RBP16.53■□□□□ 0.24
TMCO1-204ENST00000465705 NPHP4O75161 1426 aaPredicted RBP16.53■□□□□ 0.24
TMCO1-204ENST00000465705 ZFYVE9O95405 1425 aa16.53■□□□□ 0.24
TMCO1-204ENST00000465705 HDGFP51858 240 aaKnown RBP16.52■□□□□ 0.24
TMCO1-204ENST00000465705 MED14O60244 1454 aa16.52■□□□□ 0.23
TMCO1-204ENST00000465705 IQGAP1P46940 1657 aa16.52■□□□□ 0.23
TMCO1-204ENST00000465705 DHX57Q6P158 1386 aaKnown RBP16.51■□□□□ 0.23
TMCO1-204ENST00000465705 PPP1R15AO75807 674 aaPredicted RBP16.51■□□□□ 0.23
TMCO1-204ENST00000465705 LTKP29376 864 aa16.51■□□□□ 0.23
TMCO1-204ENST00000465705 MKRN4PQ13434 485 aaPredicted RBP16.5■□□□□ 0.23
TMCO1-204ENST00000465705 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.5■□□□□ 0.23
TMCO1-204ENST00000465705 SPATA31E1Q6ZUB1 1445 aa16.49■□□□□ 0.23
TMCO1-204ENST00000465705 NEXMIFQ5QGS0 1516 aa16.49■□□□□ 0.23
TMCO1-204ENST00000465705 NUTM2DQ5VT03 806 aaPredicted RBP16.47■□□□□ 0.23
TMCO1-204ENST00000465705 RGL3Q3MIN7 710 aa16.46■□□□□ 0.23
TMCO1-204ENST00000465705 PLEKHG1Q9ULL1 1385 aa16.46■□□□□ 0.23
TMCO1-204ENST00000465705 RPGRIP1LQ68CZ1 1315 aa16.45■□□□□ 0.22
TMCO1-204ENST00000465705 BCANQ96GW7 911 aa16.45■□□□□ 0.22
TMCO1-204ENST00000465705 PPLO60437 1756 aa16.45■□□□□ 0.22
TMCO1-204ENST00000465705 IFT172Q9UG01 1749 aa16.42■□□□□ 0.22
TMCO1-204ENST00000465705 VGFO15240 615 aaPredicted RBP16.42■□□□□ 0.22
TMCO1-204ENST00000465705 SETBP1Q9Y6X0 1596 aa16.41■□□□□ 0.22
TMCO1-204ENST00000465705 DIP2AQ14689 1571 aa16.4■□□□□ 0.22
TMCO1-204ENST00000465705 SLC26A8Q96RN1 970 aa16.4■□□□□ 0.22
TMCO1-204ENST00000465705 ZNF335Q9H4Z2 1342 aaPredicted RBP16.39■□□□□ 0.21
TMCO1-204ENST00000465705 NRXN3Q9Y4C0 1643 aa16.38■□□□□ 0.21
TMCO1-204ENST00000465705 ADAMTS13Q76LX8 1427 aa16.38■□□□□ 0.21
TMCO1-204ENST00000465705 MYOM2P54296 1465 aa16.38■□□□□ 0.21
TMCO1-204ENST00000465705 FBXO41Q8TF61 875 aa16.38■□□□□ 0.21
TMCO1-204ENST00000465705 NEUROD1Q13562 356 aa16.36■□□□□ 0.21
TMCO1-204ENST00000465705 SIN3AQ96ST3 1273 aa16.36■□□□□ 0.21
TMCO1-204ENST00000465705 TBX22Q9Y458 520 aa16.35■□□□□ 0.21
TMCO1-204ENST00000465705 ADGRF5Q8IZF2 1346 aa16.35■□□□□ 0.21
TMCO1-204ENST00000465705 LTBP4Q8N2S1 1624 aa16.34■□□□□ 0.21
TMCO1-204ENST00000465705 DCAF11Q8TEB1 546 aa16.34■□□□□ 0.21
TMCO1-204ENST00000465705 PIK3C2GO75747 1445 aa16.34■□□□□ 0.21
TMCO1-204ENST00000465705 CPS1P31327 1500 aa16.34■□□□□ 0.21
TMCO1-204ENST00000465705 NRXN1Q9ULB1 1477 aa16.33■□□□□ 0.2
TMCO1-204ENST00000465705 ALKQ9UM73 1620 aa16.33■□□□□ 0.2
TMCO1-204ENST00000465705 NWD1Q149M9 1564 aa16.32■□□□□ 0.2
TMCO1-204ENST00000465705 STAC3Q96MF2 364 aa16.32■□□□□ 0.2
TMCO1-204ENST00000465705 PIK3R4Q99570 1358 aa16.32■□□□□ 0.2
TMCO1-204ENST00000465705 KDM2AQ9Y2K7 1162 aa16.32■□□□□ 0.2
TMCO1-204ENST00000465705 CCER1Q8TC90 406 aaPredicted RBP16.31■□□□□ 0.2
TMCO1-204ENST00000465705 AKT1S1Q96B36 256 aa16.31■□□□□ 0.2
TMCO1-204ENST00000465705 STRCP1A6NGW2 1772 aa16.31■□□□□ 0.2
TMCO1-204ENST00000465705 SETD1AO15047 1707 aaKnown RBP16.31■□□□□ 0.2
TMCO1-204ENST00000465705 LAMC1P11047 1609 aa16.3■□□□□ 0.2
TMCO1-204ENST00000465705 CLSPNQ9HAW4 1339 aa16.3■□□□□ 0.2
TMCO1-204ENST00000465705 KCNA6P17658 529 aa16.3■□□□□ 0.2
TMCO1-204ENST00000465705 NKTRP30414 1462 aaKnown RBP16.29■□□□□ 0.2
TMCO1-204ENST00000465705 METP08581 1390 aa16.29■□□□□ 0.2
TMCO1-204ENST00000465705 TONSLQ96HA7 1378 aa16.29■□□□□ 0.2
TMCO1-204ENST00000465705 CHD2O14647 1828 aaKnown RBP16.29■□□□□ 0.2
TMCO1-204ENST00000465705 L3MBTL2Q969R5 705 aa16.27■□□□□ 0.2
TMCO1-204ENST00000465705 XRN1Q8IZH2 1706 aaKnown RBP16.26■□□□□ 0.19
TMCO1-204ENST00000465705 CERKQ8TCT0 537 aa16.26■□□□□ 0.19
TMCO1-204ENST00000465705 PTPRUQ92729 1446 aa16.26■□□□□ 0.19
TMCO1-204ENST00000465705 LRRC7Q96NW7 1537 aa16.25■□□□□ 0.19
TMCO1-204ENST00000465705 SPDYE2BA6NHP3 402 aa16.25■□□□□ 0.19
TMCO1-204ENST00000465705 SPDYE6P0CI01 402 aa16.25■□□□□ 0.19
TMCO1-204ENST00000465705 SPDYE2Q495Y8 402 aa16.25■□□□□ 0.19
TMCO1-204ENST00000465705 AMOTL2Q9Y2J4 779 aa16.25■□□□□ 0.19
TMCO1-204ENST00000465705 PRAG1Q86YV5 1406 aa16.25■□□□□ 0.19
TMCO1-204ENST00000465705 ASXL1Q8IXJ9 1541 aa16.24■□□□□ 0.19
TMCO1-204ENST00000465705 IQSEC2Q5JU85 1478 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms