RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 TSPY10P0CW01 314 aa15.61■□□□□ 0.09
USP39-212ENST00000465514 DIP2AQ14689 1571 aa15.61■□□□□ 0.09
USP39-212ENST00000465514 STAG3Q9UJ98 1225 aa15.59■□□□□ 0.09
USP39-212ENST00000465514 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.59■□□□□ 0.09
USP39-212ENST00000465514 ADGRB3O60242 1522 aa15.58■□□□□ 0.08
USP39-212ENST00000465514 DUOX2Q9NRD8 1548 aa15.58■□□□□ 0.08
USP39-212ENST00000465514 EP400Q96L91 3159 aa15.57■□□□□ 0.08
USP39-212ENST00000465514 MYO5BQ9ULV0 1848 aa15.57■□□□□ 0.08
USP39-212ENST00000465514 AFF2P51816 1311 aa15.57■□□□□ 0.08
USP39-212ENST00000465514 SETBP1Q9Y6X0 1596 aa15.57■□□□□ 0.08
USP39-212ENST00000465514 NUTM2BA6NNL0 878 aaPredicted RBP15.56■□□□□ 0.08
USP39-212ENST00000465514 NUTM2EB1AL46 878 aaPredicted RBP15.56■□□□□ 0.08
USP39-212ENST00000465514 NUTM2AQ8IVF1 878 aaPredicted RBP15.56■□□□□ 0.08
USP39-212ENST00000465514 NUTM2DQ5VT03 806 aaPredicted RBP15.52■□□□□ 0.08
USP39-212ENST00000465514 BCANQ96GW7 911 aa15.52■□□□□ 0.08
USP39-212ENST00000465514 IDI1Q13907 227 aa15.51■□□□□ 0.07
USP39-212ENST00000465514 CROCC2H7BZ55 1655 aa15.51■□□□□ 0.07
USP39-212ENST00000465514 C14orf37Q86TY3 774 aa15.5■□□□□ 0.07
USP39-212ENST00000465514 ZRANB1Q9UGI0 708 aa15.5■□□□□ 0.07
USP39-212ENST00000465514 NCOA3Q9Y6Q9 1424 aa15.5■□□□□ 0.07
USP39-212ENST00000465514 NHSL1Q5SYE7 1610 aa15.5■□□□□ 0.07
USP39-212ENST00000465514 GCC2Q8IWJ2 1684 aa15.49■□□□□ 0.07
USP39-212ENST00000465514 RBM6P78332 1123 aaKnown RBP15.49■□□□□ 0.07
USP39-212ENST00000465514 ERBINQ96RT1 1412 aa15.49■□□□□ 0.07
USP39-212ENST00000465514 ATAD2Q6PL18 1390 aa15.49■□□□□ 0.07
USP39-212ENST00000465514 ASXL1Q8IXJ9 1541 aa15.48■□□□□ 0.07
USP39-212ENST00000465514 ZFYVE9O95405 1425 aa15.47■□□□□ 0.07
USP39-212ENST00000465514 CADPS2Q86UW7 1296 aa15.47■□□□□ 0.07
USP39-212ENST00000465514 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.47■□□□□ 0.07
USP39-212ENST00000465514 QTRT2Q9H974 415 aaKnown RBP15.47■□□□□ 0.07
USP39-212ENST00000465514 LMTK2Q8IWU2 1503 aa15.47■□□□□ 0.07
USP39-212ENST00000465514 KIF15Q9NS87 1388 aa15.47■□□□□ 0.07
USP39-212ENST00000465514 PLEKHG1Q9ULL1 1385 aa15.47■□□□□ 0.07
USP39-212ENST00000465514 ATF3P18847 181 aa15.46■□□□□ 0.07
USP39-212ENST00000465514 BRINP3Q76B58 766 aa15.46■□□□□ 0.07
USP39-212ENST00000465514 C8orf37Q96NL8 207 aa15.46■□□□□ 0.07
USP39-212ENST00000465514 NOS1P29475 1434 aa15.45■□□□□ 0.06
USP39-212ENST00000465514 SETD5Q9C0A6 1442 aa15.45■□□□□ 0.06
USP39-212ENST00000465514 KANK1Q14678 1352 aa15.45■□□□□ 0.06
USP39-212ENST00000465514 C19orf44Q9H6X5 657 aa15.43■□□□□ 0.06
USP39-212ENST00000465514 LOC105371045A0A1W2PR82 267 aa15.42■□□□□ 0.06
USP39-212ENST00000465514 TMEM131LA2VDJ0 1609 aa15.42■□□□□ 0.06
USP39-212ENST00000465514 RIMS2Q9UQ26 1411 aa15.42■□□□□ 0.06
USP39-212ENST00000465514 PPP1R15AO75807 674 aaPredicted RBP15.41■□□□□ 0.06
USP39-212ENST00000465514 MYOM3Q5VTT5 1437 aa15.41■□□□□ 0.06
USP39-212ENST00000465514 NGLY1Q96IV0 654 aa15.4■□□□□ 0.06
USP39-212ENST00000465514 LRP5O75197 1615 aa15.39■□□□□ 0.05
USP39-212ENST00000465514 PNPLA6Q8IY17 1366 aa15.39■□□□□ 0.05
USP39-212ENST00000465514 RRP7BPQ9NSQ0 103 aa15.39■□□□□ 0.05
USP39-212ENST00000465514 DCCP43146 1447 aa15.39■□□□□ 0.05
USP39-212ENST00000465514 ADAMTS13Q76LX8 1427 aa15.39■□□□□ 0.05
USP39-212ENST00000465514 TBX22Q9Y458 520 aa15.38■□□□□ 0.05
USP39-212ENST00000465514 MST1RQ04912 1400 aa15.37■□□□□ 0.05
USP39-212ENST00000465514 VPS8Q8N3P4 1428 aa15.37■□□□□ 0.05
USP39-212ENST00000465514 SLC52A1Q9NWF4 448 aa15.37■□□□□ 0.05
USP39-212ENST00000465514 TRPM2O94759 1503 aa15.37■□□□□ 0.05
USP39-212ENST00000465514 LRRC59Q96AG4 307 aaKnown RBP15.36■□□□□ 0.05
USP39-212ENST00000465514 ABCC5O15440 1437 aa15.35■□□□□ 0.05
USP39-212ENST00000465514 XRN1Q8IZH2 1706 aaKnown RBP15.35■□□□□ 0.05
USP39-212ENST00000465514 ADAMTS2O95450 1211 aa15.35■□□□□ 0.05
USP39-212ENST00000465514 PIK3R4Q99570 1358 aa15.35■□□□□ 0.05
USP39-212ENST00000465514 KANK4Q5T7N3 995 aaPredicted RBP15.34■□□□□ 0.05
USP39-212ENST00000465514 DDX17Q92841 729 aaKnown RBP15.34■□□□□ 0.05
USP39-212ENST00000465514 PTPRUQ92729 1446 aa15.34■□□□□ 0.05
USP39-212ENST00000465514 RPRD2Q5VT52 1461 aaKnown RBP15.33■□□□□ 0.04
USP39-212ENST00000465514 UNC13BO14795 1591 aa15.32■□□□□ 0.04
USP39-212ENST00000465514 NALCNQ8IZF0 1738 aa15.32■□□□□ 0.04
USP39-212ENST00000465514 HDGFP51858 240 aaKnown RBP15.32■□□□□ 0.04
USP39-212ENST00000465514 USP21Q9UK80 565 aa15.32■□□□□ 0.04
USP39-212ENST00000465514 ATRNO75882 1429 aa15.32■□□□□ 0.04
USP39-212ENST00000465514 PTPN23Q9H3S7 1636 aa15.32■□□□□ 0.04
USP39-212ENST00000465514 CCDC125Q86Z20 511 aa15.31■□□□□ 0.04
USP39-212ENST00000465514 TRPC5Q9UL62 973 aaPredicted RBP15.31■□□□□ 0.04
USP39-212ENST00000465514 LAMC1P11047 1609 aa15.31■□□□□ 0.04
USP39-212ENST00000465514 DAPK1P53355 1430 aa15.3■□□□□ 0.04
USP39-212ENST00000465514 AMOTL2Q9Y2J4 779 aa15.3■□□□□ 0.04
USP39-212ENST00000465514 MARF1Q9Y4F3 1742 aaKnown RBP15.3■□□□□ 0.04
USP39-212ENST00000465514 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.29■□□□□ 0.04
USP39-212ENST00000465514 NRXN3Q9Y4C0 1643 aa15.28■□□□□ 0.04
USP39-212ENST00000465514 BRWD3Q6RI45 1802 aa15.28■□□□□ 0.04
USP39-212ENST00000465514 COL22A1Q8NFW1 1626 aaPredicted RBP15.28■□□□□ 0.04
USP39-212ENST00000465514 PTCH1Q13635 1447 aa15.26■□□□□ 0.03
USP39-212ENST00000465514 CHGAP10645 457 aaKnown RBP15.26■□□□□ 0.03
USP39-212ENST00000465514 BLMP54132 1417 aaPredicted RBP15.26■□□□□ 0.03
USP39-212ENST00000465514 ANKRD30AQ9BXX3 1397 aa15.25■□□□□ 0.03
USP39-212ENST00000465514 FNBP4Q8N3X1 1017 aaPredicted RBP15.25■□□□□ 0.03
USP39-212ENST00000465514 ADGRL3Q9HAR2 1447 aa15.25■□□□□ 0.03
USP39-212ENST00000465514 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.24■□□□□ 0.03
USP39-212ENST00000465514 E9PCH4 1651 aa15.24■□□□□ 0.03
USP39-212ENST00000465514 CHIC2Q9UKJ5 165 aa15.23■□□□□ 0.03
USP39-212ENST00000465514 SPHKAPQ2M3C7 1700 aa15.23■□□□□ 0.03
USP39-212ENST00000465514 BCL9LQ86UU0 1499 aa15.22■□□□□ 0.03
USP39-212ENST00000465514 DEFB132Q7Z7B7 95 aa15.22■□□□□ 0.03
USP39-212ENST00000465514 C1orf167Q5SNV9 1468 aa15.21■□□□□ 0.03
USP39-212ENST00000465514 GLI3P10071 1580 aa15.2■□□□□ 0.02
USP39-212ENST00000465514 APLP2Q06481 763 aa15.2■□□□□ 0.02
USP39-212ENST00000465514 IQGAP3Q86VI3 1631 aa15.2■□□□□ 0.02
USP39-212ENST00000465514 MYOM2P54296 1465 aa15.2■□□□□ 0.02
USP39-212ENST00000465514 SOS2Q07890 1332 aaPredicted RBP15.18■□□□□ 0.02
USP39-212ENST00000465514 ADGRL2O95490 1459 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms