RNA–Protein interactions for RNA: ENST00000465507.1

XRN1-205, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 322 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-205ENST00000465507 TTC13Q8NBP0 860 aa8.04□□□□□ -1.12
XRN1-205ENST00000465507 RBM46Q8TBY0 533 aaKnown RBP8.04□□□□□ -1.12
XRN1-205ENST00000465507 IRX2Q9BZI1 471 aaPredicted RBP8.04□□□□□ -1.12
XRN1-205ENST00000465507 ADGRG1Q9Y653 693 aa8.04□□□□□ -1.12
XRN1-205ENST00000465507 BARGINQ6ZT62 677 aa8.03□□□□□ -1.12
XRN1-205ENST00000465507 IRF6O14896 467 aa8.02□□□□□ -1.13
XRN1-205ENST00000465507 TJAP1Q5JTD0 557 aa8.01□□□□□ -1.13
XRN1-205ENST00000465507 MINK1Q8N4C8 1332 aaPredicted RBP8.01□□□□□ -1.13
XRN1-205ENST00000465507 RCCD1A6NED2 376 aa8□□□□□ -1.13
XRN1-205ENST00000465507 OATP04181 439 aa8□□□□□ -1.13
XRN1-205ENST00000465507 HDGFP51858 240 aaKnown RBP8□□□□□ -1.13
XRN1-205ENST00000465507 TTLL12Q14166 644 aaPredicted RBP8□□□□□ -1.13
XRN1-205ENST00000465507 SWT1Q5T5J6 900 aaKnown RBP8□□□□□ -1.13
XRN1-205ENST00000465507 METTL3Q86U44 580 aaKnown RBP8□□□□□ -1.13
XRN1-205ENST00000465507 MTRQ99707 1265 aa8□□□□□ -1.13
XRN1-205ENST00000465507 APLP1P51693 650 aa7.99□□□□□ -1.13
XRN1-205ENST00000465507 MDM2Q00987 491 aaPredicted RBP7.99□□□□□ -1.13
XRN1-205ENST00000465507 PXYLP1Q8TE99 480 aa7.99□□□□□ -1.13
XRN1-205ENST00000465507 PHOX2BQ99453 314 aa7.99□□□□□ -1.13
XRN1-205ENST00000465507 EYA1Q99502 592 aa7.99□□□□□ -1.13
XRN1-205ENST00000465507 DNAJB2P25686 324 aa7.97□□□□□ -1.13
XRN1-205ENST00000465507 AK7Q96M32 723 aa7.97□□□□□ -1.13
XRN1-205ENST00000465507 DDX11L8A8MPP1 907 aa7.96□□□□□ -1.14
XRN1-205ENST00000465507 RDH13Q8NBN7 331 aa7.96□□□□□ -1.14
XRN1-205ENST00000465507 ZNF516Q92618 1163 aa7.96□□□□□ -1.14
XRN1-205ENST00000465507 IL21Q9HBE4 155 aa7.96□□□□□ -1.14
XRN1-205ENST00000465507 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.94□□□□□ -1.14
XRN1-205ENST00000465507 TRIM66O15016 1216 aa7.94□□□□□ -1.14
XRN1-205ENST00000465507 SLF2Q8IX21 1173 aa7.94□□□□□ -1.14
XRN1-205ENST00000465507 SLC4A3P48751 1232 aa7.93□□□□□ -1.14
XRN1-205ENST00000465507 COPS2P61201 443 aa7.92□□□□□ -1.14
XRN1-205ENST00000465507 PDE4DQ08499 809 aa7.92□□□□□ -1.14
XRN1-205ENST00000465507 TMEM134Q9H6X4 195 aa7.92□□□□□ -1.14
XRN1-205ENST00000465507 NEUROD2Q15784 382 aa7.91□□□□□ -1.14
XRN1-205ENST00000465507 PPP1R18Q6NYC8 613 aa7.91□□□□□ -1.14
XRN1-205ENST00000465507 NKX2-3Q8TAU0 364 aa7.91□□□□□ -1.14
XRN1-205ENST00000465507 GPBP1L1Q9HC44 474 aaPredicted RBP7.91□□□□□ -1.14
XRN1-205ENST00000465507 Q6ZNB5 142 aa7.9□□□□□ -1.14
XRN1-205ENST00000465507 NECTIN2Q92692 538 aa7.9□□□□□ -1.14
XRN1-205ENST00000465507 REPIN1Q9BWE0 567 aaKnown RBP7.9□□□□□ -1.14
XRN1-205ENST00000465507 PRKD2Q9BZL6 878 aa7.89□□□□□ -1.15
XRN1-205ENST00000465507 GPCPD1Q9NPB8 672 aa7.89□□□□□ -1.15
XRN1-205ENST00000465507 DAXXQ9UER7 740 aaPredicted RBP7.89□□□□□ -1.15
XRN1-205ENST00000465507 CLCN1P35523 988 aa7.88□□□□□ -1.15
XRN1-205ENST00000465507 GIGYF2Q6Y7W6 1299 aaKnown RBP7.88□□□□□ -1.15
XRN1-205ENST00000465507 PARP9Q8IXQ6 854 aa7.88□□□□□ -1.15
XRN1-205ENST00000465507 CFHP08603 1231 aa7.87□□□□□ -1.15
XRN1-205ENST00000465507 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.87□□□□□ -1.15
XRN1-205ENST00000465507 ATP1B4Q9UN42 357 aaPredicted RBP7.87□□□□□ -1.15
XRN1-205ENST00000465507 SSTR3P32745 418 aaPredicted RBP7.86□□□□□ -1.15
XRN1-205ENST00000465507 BLOC1S3Q6QNY0 202 aa7.86□□□□□ -1.15
XRN1-205ENST00000465507 PCDHB3Q9Y5E6 796 aa7.86□□□□□ -1.15
XRN1-205ENST00000465507 ZPR1O75312 459 aa7.85□□□□□ -1.15
XRN1-205ENST00000465507 SLC10A3P09131 477 aa7.85□□□□□ -1.15
XRN1-205ENST00000465507 AMHR2Q16671 573 aa7.85□□□□□ -1.15
XRN1-205ENST00000465507 RSPH4AQ5TD94 716 aa7.85□□□□□ -1.15
XRN1-205ENST00000465507 SULF1Q8IWU6 871 aa7.85□□□□□ -1.15
XRN1-205ENST00000465507 TLL1O43897 1013 aa7.84□□□□□ -1.15
XRN1-205ENST00000465507 GFRA3O60609 400 aa7.84□□□□□ -1.15
XRN1-205ENST00000465507 PRR14Q9BWN1 585 aa7.84□□□□□ -1.15
XRN1-205ENST00000465507 LCE2BO14633 110 aa7.83□□□□□ -1.16
XRN1-205ENST00000465507 MS4A1P11836 297 aa7.83□□□□□ -1.16
XRN1-205ENST00000465507 PUS10Q3MIT2 529 aaKnown RBP7.83□□□□□ -1.16
XRN1-205ENST00000465507 KMT5BQ4FZB7 885 aa7.83□□□□□ -1.16
XRN1-205ENST00000465507 KDM4CQ9H3R0 1056 aa7.83□□□□□ -1.16
XRN1-205ENST00000465507 FAM217BQ9NTX9 383 aaPredicted RBP7.83□□□□□ -1.16
XRN1-205ENST00000465507 V9GY48 417 aaPredicted RBP7.83□□□□□ -1.16
XRN1-205ENST00000465507 BEGAINQ9BUH8 593 aa7.82□□□□□ -1.16
XRN1-205ENST00000465507 GGCXP38435 758 aa7.81□□□□□ -1.16
XRN1-205ENST00000465507 LAPTM4AQ15012 233 aa7.81□□□□□ -1.16
XRN1-205ENST00000465507 NUTM1Q86Y26 1132 aa7.81□□□□□ -1.16
XRN1-205ENST00000465507 ACTN4O43707 911 aaKnown RBP7.8□□□□□ -1.16
XRN1-205ENST00000465507 CD46P15529 392 aa7.8□□□□□ -1.16
XRN1-205ENST00000465507 BRPF1P55201 1214 aaPredicted RBP7.8□□□□□ -1.16
XRN1-205ENST00000465507 GUCA2AQ02747 115 aa7.79□□□□□ -1.16
XRN1-205ENST00000465507 FUT2Q10981 343 aa7.79□□□□□ -1.16
XRN1-205ENST00000465507 IL27Q8NEV9 243 aa7.79□□□□□ -1.16
XRN1-205ENST00000465507 RNF223E7ERA6 249 aa7.78□□□□□ -1.16
XRN1-205ENST00000465507 NRG2O14511 850 aaPredicted RBP7.78□□□□□ -1.16
XRN1-205ENST00000465507 CSPP1Q1MSJ5 1256 aa7.78□□□□□ -1.16
XRN1-205ENST00000465507 HLA-CQ95604 372 aa7.78□□□□□ -1.16
XRN1-205ENST00000465507 TMUB1Q9BVT8 246 aa7.78□□□□□ -1.16
XRN1-205ENST00000465507 FAM117AQ9C073 453 aa7.78□□□□□ -1.16
XRN1-205ENST00000465507 GCGRP47871 477 aa7.77□□□□□ -1.17
XRN1-205ENST00000465507 KDM4AO75164 1064 aa7.76□□□□□ -1.17
XRN1-205ENST00000465507 S1PR4O95977 384 aa7.76□□□□□ -1.17
XRN1-205ENST00000465507 EMID1Q96A84 441 aaPredicted RBP7.76□□□□□ -1.17
XRN1-205ENST00000465507 PDZRN3Q9UPQ7 1066 aa7.76□□□□□ -1.17
XRN1-205ENST00000465507 PPEF1O14829 653 aaPredicted RBP7.75□□□□□ -1.17
XRN1-205ENST00000465507 NDUFV2P19404 249 aa7.75□□□□□ -1.17
XRN1-205ENST00000465507 TRAF7Q6Q0C0 670 aa7.75□□□□□ -1.17
XRN1-205ENST00000465507 ADH1BP00325 375 aa7.74□□□□□ -1.17
XRN1-205ENST00000465507 SPIRE2Q8WWL2 714 aa7.74□□□□□ -1.17
XRN1-205ENST00000465507 TBC1D2Q9BYX2 928 aa7.74□□□□□ -1.17
XRN1-205ENST00000465507 POLR3EQ9NVU0 708 aa7.74□□□□□ -1.17
XRN1-205ENST00000465507 NR1I2O75469 434 aa7.73□□□□□ -1.17
XRN1-205ENST00000465507 ATP6V1AP38606 617 aa7.73□□□□□ -1.17
XRN1-205ENST00000465507 SLC19A1P41440 591 aa7.73□□□□□ -1.17
XRN1-205ENST00000465507 MOXD2PA6NHM9 499 aa7.72□□□□□ -1.17
XRN1-205ENST00000465507 GRIPAP1Q4V328 841 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms