RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 ROCK1Q13464 1354 aa21.02■□□□□ 0.96
RPP40-203ENST00000464646 NUTM2DQ5VT03 806 aaPredicted RBP21.01■□□□□ 0.95
RPP40-203ENST00000464646 RBM33Q96EV2 1170 aaKnown RBP21.01■□□□□ 0.95
RPP40-203ENST00000464646 UNC13BO14795 1591 aa21.01■□□□□ 0.95
RPP40-203ENST00000464646 KCNA6P17658 529 aa20.99■□□□□ 0.95
RPP40-203ENST00000464646 RIMS2Q9UQ26 1411 aa20.97■□□□□ 0.95
RPP40-203ENST00000464646 E9PCH4 1651 aa20.97■□□□□ 0.95
RPP40-203ENST00000464646 SOCS7O14512 581 aa20.96■□□□□ 0.95
RPP40-203ENST00000464646 TMEM94Q12767 1356 aa20.96■□□□□ 0.95
RPP40-203ENST00000464646 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.95■□□□□ 0.94
RPP40-203ENST00000464646 XIRP1Q702N8 1843 aaKnown RBP20.94■□□□□ 0.94
RPP40-203ENST00000464646 IQGAP3Q86VI3 1631 aa20.94■□□□□ 0.94
RPP40-203ENST00000464646 ALKQ9UM73 1620 aa20.94■□□□□ 0.94
RPP40-203ENST00000464646 C14orf37Q86TY3 774 aa20.93■□□□□ 0.94
RPP40-203ENST00000464646 MED1Q15648 1581 aaPredicted RBP20.93■□□□□ 0.94
RPP40-203ENST00000464646 TMEM131LA2VDJ0 1609 aa20.92■□□□□ 0.94
RPP40-203ENST00000464646 ZNF326Q5BKZ1 582 aaKnown RBP20.91■□□□□ 0.94
RPP40-203ENST00000464646 PLEKHG1Q9ULL1 1385 aa20.91■□□□□ 0.94
RPP40-203ENST00000464646 TRIM52Q96A61 297 aa20.9■□□□□ 0.94
RPP40-203ENST00000464646 ZFYVE9O95405 1425 aa20.88■□□□□ 0.93
RPP40-203ENST00000464646 MSH6P52701 1360 aa20.88■□□□□ 0.93
RPP40-203ENST00000464646 NKTRP30414 1462 aaKnown RBP20.85■□□□□ 0.93
RPP40-203ENST00000464646 TBX22Q9Y458 520 aa20.84■□□□□ 0.93
RPP40-203ENST00000464646 CHD2O14647 1828 aaKnown RBP20.83■□□□□ 0.93
RPP40-203ENST00000464646 RRBP1Q9P2E9 1410 aaKnown RBP20.83■□□□□ 0.93
RPP40-203ENST00000464646 SPHKAPQ2M3C7 1700 aa20.83■□□□□ 0.92
RPP40-203ENST00000464646 NWD1Q149M9 1564 aa20.82■□□□□ 0.92
RPP40-203ENST00000464646 ROBO1Q9Y6N7 1651 aa20.8■□□□□ 0.92
RPP40-203ENST00000464646 FAM135BQ49AJ0 1406 aa20.79■□□□□ 0.92
RPP40-203ENST00000464646 SLAIN2Q9P270 581 aa20.79■□□□□ 0.92
RPP40-203ENST00000464646 AMOTL2Q9Y2J4 779 aa20.77■□□□□ 0.92
RPP40-203ENST00000464646 NAIPQ13075 1403 aa20.77■□□□□ 0.91
RPP40-203ENST00000464646 ATF3P18847 181 aa20.76■□□□□ 0.91
RPP40-203ENST00000464646 ADAMTS13Q76LX8 1427 aa20.76■□□□□ 0.91
RPP40-203ENST00000464646 TRPM2O94759 1503 aa20.75■□□□□ 0.91
RPP40-203ENST00000464646 SLC4A1APQ9BWU0 796 aaKnown RBP20.75■□□□□ 0.91
RPP40-203ENST00000464646 DIP2AQ14689 1571 aa20.75■□□□□ 0.91
RPP40-203ENST00000464646 KIF1BO60333 1816 aa20.74■□□□□ 0.91
RPP40-203ENST00000464646 PHLPP1O60346 1717 aa20.72■□□□□ 0.91
RPP40-203ENST00000464646 PIK3R4Q99570 1358 aa20.72■□□□□ 0.91
RPP40-203ENST00000464646 CLTCL1P53675 1640 aa20.71■□□□□ 0.91
RPP40-203ENST00000464646 CADPS2Q86UW7 1296 aa20.71■□□□□ 0.91
RPP40-203ENST00000464646 C19orf44Q9H6X5 657 aa20.71■□□□□ 0.91
RPP40-203ENST00000464646 HFM1A2PYH4 1435 aa20.68■□□□□ 0.9
RPP40-203ENST00000464646 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.67■□□□□ 0.9
RPP40-203ENST00000464646 PTPRUQ92729 1446 aa20.67■□□□□ 0.9
RPP40-203ENST00000464646 NCOA3Q9Y6Q9 1424 aa20.67■□□□□ 0.9
RPP40-203ENST00000464646 FOXD1Q16676 465 aa20.66■□□□□ 0.9
RPP40-203ENST00000464646 MEX3CQ5U5Q3 659 aaKnown RBP20.64■□□□□ 0.89
RPP40-203ENST00000464646 METP08581 1390 aa20.63■□□□□ 0.89
RPP40-203ENST00000464646 VGFO15240 615 aaPredicted RBP20.63■□□□□ 0.89
RPP40-203ENST00000464646 NRXN3Q9Y4C0 1643 aa20.63■□□□□ 0.89
RPP40-203ENST00000464646 SETBP1Q9Y6X0 1596 aa20.63■□□□□ 0.89
RPP40-203ENST00000464646 NEXMIFQ5QGS0 1516 aa20.63■□□□□ 0.89
RPP40-203ENST00000464646 JCADQ9P266 1359 aa20.62■□□□□ 0.89
RPP40-203ENST00000464646 RGS17Q9UGC6 210 aaPredicted RBP20.6■□□□□ 0.89
RPP40-203ENST00000464646 RGL3Q3MIN7 710 aa20.59■□□□□ 0.89
RPP40-203ENST00000464646 XRN1Q8IZH2 1706 aaKnown RBP20.58■□□□□ 0.88
RPP40-203ENST00000464646 NUTM2BA6NNL0 878 aaPredicted RBP20.57■□□□□ 0.88
RPP40-203ENST00000464646 NUTM2EB1AL46 878 aaPredicted RBP20.57■□□□□ 0.88
RPP40-203ENST00000464646 BRINP3Q76B58 766 aa20.57■□□□□ 0.88
RPP40-203ENST00000464646 NUTM2AQ8IVF1 878 aaPredicted RBP20.57■□□□□ 0.88
RPP40-203ENST00000464646 RPGRIP1LQ68CZ1 1315 aa20.55■□□□□ 0.88
RPP40-203ENST00000464646 POTEAQ6S8J7 498 aa20.55■□□□□ 0.88
RPP40-203ENST00000464646 MPHOSPH9Q99550 1183 aa20.55■□□□□ 0.88
RPP40-203ENST00000464646 COL16A1Q07092 1604 aaPredicted RBP20.55■□□□□ 0.88
RPP40-203ENST00000464646 CCDC144AA2RUR9 1427 aa20.54■□□□□ 0.88
RPP40-203ENST00000464646 DCCP43146 1447 aa20.53■□□□□ 0.88
RPP40-203ENST00000464646 SPATA31A6Q5VVP1 1343 aa20.52■□□□□ 0.87
RPP40-203ENST00000464646 PPLO60437 1756 aa20.51■□□□□ 0.87
RPP40-203ENST00000464646 ADGRL3Q9HAR2 1447 aa20.51■□□□□ 0.87
RPP40-203ENST00000464646 AHDC1Q5TGY3 1603 aaPredicted RBP20.5■□□□□ 0.87
RPP40-203ENST00000464646 DDX17Q92841 729 aaKnown RBP20.5■□□□□ 0.87
RPP40-203ENST00000464646 STK26Q9P289 416 aa20.5■□□□□ 0.87
RPP40-203ENST00000464646 MST1RQ04912 1400 aa20.5■□□□□ 0.87
RPP40-203ENST00000464646 ASXL1Q8IXJ9 1541 aa20.49■□□□□ 0.87
RPP40-203ENST00000464646 NALCNQ8IZF0 1738 aa20.49■□□□□ 0.87
RPP40-203ENST00000464646 ROBO2Q9HCK4 1378 aa20.46■□□□□ 0.87
RPP40-203ENST00000464646 LRRC59Q96AG4 307 aaKnown RBP20.46■□□□□ 0.87
RPP40-203ENST00000464646 ADGRF5Q8IZF2 1346 aa20.46■□□□□ 0.87
RPP40-203ENST00000464646 SHPRHQ149N8 1683 aa20.45■□□□□ 0.86
RPP40-203ENST00000464646 LRP6O75581 1613 aa20.45■□□□□ 0.86
RPP40-203ENST00000464646 SETD5Q9C0A6 1442 aa20.44■□□□□ 0.86
RPP40-203ENST00000464646 ZNF772Q68DY9 489 aaPredicted RBP20.44■□□□□ 0.86
RPP40-203ENST00000464646 SETD1AO15047 1707 aaKnown RBP20.44■□□□□ 0.86
RPP40-203ENST00000464646 PTCH1Q13635 1447 aa20.43■□□□□ 0.86
RPP40-203ENST00000464646 ORAI2Q96SN7 254 aa20.42■□□□□ 0.86
RPP40-203ENST00000464646 NUTM2FA1L443 756 aa20.41■□□□□ 0.86
RPP40-203ENST00000464646 TMEM132EQ6IEE7 984 aa20.41■□□□□ 0.86
RPP40-203ENST00000464646 C1orf167Q5SNV9 1468 aa20.41■□□□□ 0.86
RPP40-203ENST00000464646 NHSL1Q5SYE7 1610 aa20.41■□□□□ 0.86
RPP40-203ENST00000464646 C8orf37Q96NL8 207 aa20.4■□□□□ 0.86
RPP40-203ENST00000464646 ANKRD30BQ9BXX2 1392 aa20.4■□□□□ 0.86
RPP40-203ENST00000464646 ACIN1Q9UKV3 1341 aaKnown RBP20.4■□□□□ 0.86
RPP40-203ENST00000464646 ESCO1Q5FWF5 840 aa20.39■□□□□ 0.85
RPP40-203ENST00000464646 WAPLQ7Z5K2 1190 aa20.38■□□□□ 0.85
RPP40-203ENST00000464646 ADAMTS2O95450 1211 aa20.37■□□□□ 0.85
RPP40-203ENST00000464646 RAB3GAP2Q9H2M9 1393 aa20.36■□□□□ 0.85
RPP40-203ENST00000464646 AFF2P51816 1311 aa20.36■□□□□ 0.85
RPP40-203ENST00000464646 RXRBP28702 533 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms