RNA–Protein interactions for RNA: ENST00000464621.1

TFCP2L1-202, Transcript of transcription factor CP2 like 1, humanhuman

TSL 4

Gene TFCP2L1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1-202ENST00000464621 SLIT1O75093 1534 aa13.53□□□□□ -0.24
TFCP2L1-202ENST00000464621 STAG3Q9UJ98 1225 aa13.52□□□□□ -0.25
TFCP2L1-202ENST00000464621 TMEM131LA2VDJ0 1609 aa13.52□□□□□ -0.25
TFCP2L1-202ENST00000464621 IQGAP1P46940 1657 aa13.52□□□□□ -0.25
TFCP2L1-202ENST00000464621 KIF1BO60333 1816 aa13.5□□□□□ -0.25
TFCP2L1-202ENST00000464621 CLTCL1P53675 1640 aa13.5□□□□□ -0.25
TFCP2L1-202ENST00000464621 ARHGAP23Q9P227 1491 aa13.5□□□□□ -0.25
TFCP2L1-202ENST00000464621 SLC4A1APQ9BWU0 796 aaKnown RBP13.5□□□□□ -0.25
TFCP2L1-202ENST00000464621 SCAF11Q99590 1463 aaKnown RBP13.49□□□□□ -0.25
TFCP2L1-202ENST00000464621 IDI1Q13907 227 aa13.48□□□□□ -0.25
TFCP2L1-202ENST00000464621 MED14O60244 1454 aa13.48□□□□□ -0.25
TFCP2L1-202ENST00000464621 ANKLE2Q86XL3 938 aa13.47□□□□□ -0.25
TFCP2L1-202ENST00000464621 NPHP4O75161 1426 aaPredicted RBP13.47□□□□□ -0.25
TFCP2L1-202ENST00000464621 TMEM2Q9UHN6 1383 aa13.46□□□□□ -0.25
TFCP2L1-202ENST00000464621 LRRC7Q96NW7 1537 aa13.46□□□□□ -0.25
TFCP2L1-202ENST00000464621 EID1Q9Y6B2 187 aa13.45□□□□□ -0.26
TFCP2L1-202ENST00000464621 STRCP1A6NGW2 1772 aa13.45□□□□□ -0.26
TFCP2L1-202ENST00000464621 CHGAP10645 457 aaKnown RBP13.44□□□□□ -0.26
TFCP2L1-202ENST00000464621 MPHOSPH9Q99550 1183 aa13.44□□□□□ -0.26
TFCP2L1-202ENST00000464621 CCDC144AA2RUR9 1427 aa13.43□□□□□ -0.26
TFCP2L1-202ENST00000464621 HRCP23327 699 aa13.43□□□□□ -0.26
TFCP2L1-202ENST00000464621 FOXD1Q16676 465 aa13.43□□□□□ -0.26
TFCP2L1-202ENST00000464621 IFFO2Q5TF58 517 aa13.43□□□□□ -0.26
TFCP2L1-202ENST00000464621 ZFYVE9O95405 1425 aa13.42□□□□□ -0.26
TFCP2L1-202ENST00000464621 RIMS2Q9UQ26 1411 aa13.42□□□□□ -0.26
TFCP2L1-202ENST00000464621 ZRANB1Q9UGI0 708 aa13.42□□□□□ -0.26
TFCP2L1-202ENST00000464621 ZNF772Q68DY9 489 aaPredicted RBP13.41□□□□□ -0.26
TFCP2L1-202ENST00000464621 TXNDC2Q86VQ3 553 aa13.41□□□□□ -0.26
TFCP2L1-202ENST00000464621 FAM135BQ49AJ0 1406 aa13.4□□□□□ -0.26
TFCP2L1-202ENST00000464621 HDGFP51858 240 aaKnown RBP13.4□□□□□ -0.26
TFCP2L1-202ENST00000464621 TRIM26Q12899 539 aaPredicted RBP13.4□□□□□ -0.26
TFCP2L1-202ENST00000464621 RBM33Q96EV2 1170 aaKnown RBP13.4□□□□□ -0.26
TFCP2L1-202ENST00000464621 NEXMIFQ5QGS0 1516 aa13.39□□□□□ -0.27
TFCP2L1-202ENST00000464621 PPP1R15AO75807 674 aaPredicted RBP13.39□□□□□ -0.27
TFCP2L1-202ENST00000464621 RXRBP28702 533 aa13.39□□□□□ -0.27
TFCP2L1-202ENST00000464621 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.39□□□□□ -0.27
TFCP2L1-202ENST00000464621 DIP2AQ14689 1571 aa13.39□□□□□ -0.27
TFCP2L1-202ENST00000464621 PPLO60437 1756 aa13.38□□□□□ -0.27
TFCP2L1-202ENST00000464621 LTKP29376 864 aa13.38□□□□□ -0.27
TFCP2L1-202ENST00000464621 IFT172Q9UG01 1749 aa13.38□□□□□ -0.27
TFCP2L1-202ENST00000464621 PLEKHG1Q9ULL1 1385 aa13.37□□□□□ -0.27
TFCP2L1-202ENST00000464621 ZNF326Q5BKZ1 582 aaKnown RBP13.37□□□□□ -0.27
TFCP2L1-202ENST00000464621 SETBP1Q9Y6X0 1596 aa13.37□□□□□ -0.27
TFCP2L1-202ENST00000464621 XIRP1Q702N8 1843 aaKnown RBP13.34□□□□□ -0.27
TFCP2L1-202ENST00000464621 NWD1Q149M9 1564 aa13.34□□□□□ -0.27
TFCP2L1-202ENST00000464621 MEX3CQ5U5Q3 659 aaKnown RBP13.34□□□□□ -0.27
TFCP2L1-202ENST00000464621 BCANQ96GW7 911 aa13.34□□□□□ -0.27
TFCP2L1-202ENST00000464621 NRXN3Q9Y4C0 1643 aa13.34□□□□□ -0.27
TFCP2L1-202ENST00000464621 CDK12Q9NYV4 1490 aaPredicted RBP13.34□□□□□ -0.27
TFCP2L1-202ENST00000464621 ROBO1Q9Y6N7 1651 aa13.33□□□□□ -0.28
TFCP2L1-202ENST00000464621 SPATA31E1Q6ZUB1 1445 aa13.32□□□□□ -0.28
TFCP2L1-202ENST00000464621 JCADQ9P266 1359 aa13.32□□□□□ -0.28
TFCP2L1-202ENST00000464621 CHD2O14647 1828 aaKnown RBP13.31□□□□□ -0.28
TFCP2L1-202ENST00000464621 RPGRIP1LQ68CZ1 1315 aa13.31□□□□□ -0.28
TFCP2L1-202ENST00000464621 ANKRD30BQ9BXX2 1392 aa13.31□□□□□ -0.28
TFCP2L1-202ENST00000464621 NKTRP30414 1462 aaKnown RBP13.3□□□□□ -0.28
TFCP2L1-202ENST00000464621 NUTM2DQ5VT03 806 aaPredicted RBP13.3□□□□□ -0.28
TFCP2L1-202ENST00000464621 SLC26A8Q96RN1 970 aa13.29□□□□□ -0.28
TFCP2L1-202ENST00000464621 PHLPP1O60346 1717 aa13.29□□□□□ -0.28
TFCP2L1-202ENST00000464621 ADAMTS13Q76LX8 1427 aa13.29□□□□□ -0.28
TFCP2L1-202ENST00000464621 LAMC1P11047 1609 aa13.28□□□□□ -0.28
TFCP2L1-202ENST00000464621 MYOM2P54296 1465 aa13.28□□□□□ -0.28
TFCP2L1-202ENST00000464621 NUTM2BA6NNL0 878 aaPredicted RBP13.27□□□□□ -0.29
TFCP2L1-202ENST00000464621 NUTM2EB1AL46 878 aaPredicted RBP13.27□□□□□ -0.29
TFCP2L1-202ENST00000464621 VGFO15240 615 aaPredicted RBP13.27□□□□□ -0.29
TFCP2L1-202ENST00000464621 NUTM2AQ8IVF1 878 aaPredicted RBP13.27□□□□□ -0.29
TFCP2L1-202ENST00000464621 PIK3R4Q99570 1358 aa13.27□□□□□ -0.29
TFCP2L1-202ENST00000464621 XRN1Q8IZH2 1706 aaKnown RBP13.27□□□□□ -0.29
TFCP2L1-202ENST00000464621 TBX22Q9Y458 520 aa13.26□□□□□ -0.29
TFCP2L1-202ENST00000464621 RGL3Q3MIN7 710 aa13.25□□□□□ -0.29
TFCP2L1-202ENST00000464621 LRP6O75581 1613 aa13.24□□□□□ -0.29
TFCP2L1-202ENST00000464621 SPATA31A6Q5VVP1 1343 aa13.24□□□□□ -0.29
TFCP2L1-202ENST00000464621 KCNA6P17658 529 aa13.24□□□□□ -0.29
TFCP2L1-202ENST00000464621 DHX57Q6P158 1386 aaKnown RBP13.23□□□□□ -0.29
TFCP2L1-202ENST00000464621 PIK3C2GO75747 1445 aa13.22□□□□□ -0.29
TFCP2L1-202ENST00000464621 NRXN1Q9ULB1 1477 aa13.22□□□□□ -0.29
TFCP2L1-202ENST00000464621 KNDC1Q76NI1 1749 aa13.22□□□□□ -0.29
TFCP2L1-202ENST00000464621 RGS12O14924 1447 aa13.21□□□□□ -0.3
TFCP2L1-202ENST00000464621 ATAD2Q6PL18 1390 aa13.2□□□□□ -0.3
TFCP2L1-202ENST00000464621 ADGRF5Q8IZF2 1346 aa13.19□□□□□ -0.3
TFCP2L1-202ENST00000464621 LRP5O75197 1615 aa13.19□□□□□ -0.3
TFCP2L1-202ENST00000464621 PTPRUQ92729 1446 aa13.19□□□□□ -0.3
TFCP2L1-202ENST00000464621 METP08581 1390 aa13.19□□□□□ -0.3
TFCP2L1-202ENST00000464621 TMEM94Q12767 1356 aa13.19□□□□□ -0.3
TFCP2L1-202ENST00000464621 EP400Q96L91 3159 aa13.18□□□□□ -0.3
TFCP2L1-202ENST00000464621 PTCH1Q13635 1447 aa13.18□□□□□ -0.3
TFCP2L1-202ENST00000464621 PRAG1Q86YV5 1406 aa13.18□□□□□ -0.3
TFCP2L1-202ENST00000464621 ASXL1Q8IXJ9 1541 aa13.18□□□□□ -0.3
TFCP2L1-202ENST00000464621 NCOA3Q9Y6Q9 1424 aa13.17□□□□□ -0.3
TFCP2L1-202ENST00000464621 YY1P25490 414 aa13.17□□□□□ -0.3
TFCP2L1-202ENST00000464621 RBM6P78332 1123 aaKnown RBP13.17□□□□□ -0.3
TFCP2L1-202ENST00000464621 PROSER2Q86WR7 435 aaPredicted RBP13.17□□□□□ -0.3
TFCP2L1-202ENST00000464621 PCGF6Q9BYE7 350 aa13.17□□□□□ -0.3
TFCP2L1-202ENST00000464621 AMOTL2Q9Y2J4 779 aa13.17□□□□□ -0.3
TFCP2L1-202ENST00000464621 NALCNQ8IZF0 1738 aa13.16□□□□□ -0.3
TFCP2L1-202ENST00000464621 KIAA1210Q9ULL0 1709 aa13.16□□□□□ -0.3
TFCP2L1-202ENST00000464621 STAC3Q96MF2 364 aa13.16□□□□□ -0.3
TFCP2L1-202ENST00000464621 MSH6P52701 1360 aa13.16□□□□□ -0.3
TFCP2L1-202ENST00000464621 COL16A1Q07092 1604 aaPredicted RBP13.16□□□□□ -0.3
TFCP2L1-202ENST00000464621 AFF2P51816 1311 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms