RNA–Protein interactions for RNA: ENST00000464611.1

ACTB-208, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 715 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-208ENST00000464611 FER1L4A9Z1Z3 1794 aa11.59□□□□□ -0.55
ACTB-208ENST00000464611 C11orf95C9JLR9 678 aaPredicted RBP11.59□□□□□ -0.55
ACTB-208ENST00000464611 MROH1Q8NDA8 1641 aa11.58□□□□□ -0.56
ACTB-208ENST00000464611 SLC24A1O60721 1099 aa11.58□□□□□ -0.56
ACTB-208ENST00000464611 RALBP1Q15311 655 aa11.58□□□□□ -0.56
ACTB-208ENST00000464611 CARD11Q9BXL7 1154 aa11.58□□□□□ -0.56
ACTB-208ENST00000464611 CCDC144AA2RUR9 1427 aa11.58□□□□□ -0.56
ACTB-208ENST00000464611 MROH2AA6NES4 1674 aa11.57□□□□□ -0.56
ACTB-208ENST00000464611 LAMC1P11047 1609 aa11.57□□□□□ -0.56
ACTB-208ENST00000464611 IQGAP3Q86VI3 1631 aa11.57□□□□□ -0.56
ACTB-208ENST00000464611 KANK1Q14678 1352 aa11.56□□□□□ -0.56
ACTB-208ENST00000464611 TSHZ2Q9NRE2 1034 aa11.56□□□□□ -0.56
ACTB-208ENST00000464611 ADAMTSL3P82987 1691 aa11.55□□□□□ -0.56
ACTB-208ENST00000464611 GPRASP1Q5JY77 1395 aa11.55□□□□□ -0.56
ACTB-208ENST00000464611 VWDEQ8N2E2 1590 aa11.55□□□□□ -0.56
ACTB-208ENST00000464611 KIF3BO15066 747 aa11.55□□□□□ -0.56
ACTB-208ENST00000464611 MADDQ8WXG6 1647 aa11.55□□□□□ -0.56
ACTB-208ENST00000464611 CEP152O94986 1710 aa11.55□□□□□ -0.56
ACTB-208ENST00000464611 INSRP06213 1382 aa11.54□□□□□ -0.56
ACTB-208ENST00000464611 CAMSAP1Q5T5Y3 1602 aa11.54□□□□□ -0.56
ACTB-208ENST00000464611 DCAF11Q8TEB1 546 aa11.54□□□□□ -0.56
ACTB-208ENST00000464611 PPP4R2Q9NY27 417 aa11.54□□□□□ -0.56
ACTB-208ENST00000464611 CLTCQ00610 1675 aaKnown RBP11.54□□□□□ -0.56
ACTB-208ENST00000464611 ABCC3O15438 1527 aa11.54□□□□□ -0.56
ACTB-208ENST00000464611 LMTK2Q8IWU2 1503 aa11.54□□□□□ -0.56
ACTB-208ENST00000464611 TET3O43151 1660 aa11.53□□□□□ -0.56
ACTB-208ENST00000464611 RIMS1Q86UR5 1692 aaKnown RBP11.53□□□□□ -0.56
ACTB-208ENST00000464611 BRD4O60885 1362 aaPredicted RBP11.53□□□□□ -0.56
ACTB-208ENST00000464611 EFCAB6Q5THR3 1501 aa11.52□□□□□ -0.57
ACTB-208ENST00000464611 ESF1Q9H501 851 aaKnown RBP11.52□□□□□ -0.57
ACTB-208ENST00000464611 PRAG1Q86YV5 1406 aa11.52□□□□□ -0.57
ACTB-208ENST00000464611 REM2Q8IYK8 340 aaPredicted RBP11.51□□□□□ -0.57
ACTB-208ENST00000464611 FAM9BQ8IZU0 186 aa11.51□□□□□ -0.57
ACTB-208ENST00000464611 SMG6Q86US8 1419 aaKnown RBP11.51□□□□□ -0.57
ACTB-208ENST00000464611 ZNF326Q5BKZ1 582 aaKnown RBP11.5□□□□□ -0.57
ACTB-208ENST00000464611 GGT6Q6P531 493 aa11.5□□□□□ -0.57
ACTB-208ENST00000464611 TMC1Q8TDI8 760 aa11.5□□□□□ -0.57
ACTB-208ENST00000464611 MLECQ14165 292 aa11.49□□□□□ -0.57
ACTB-208ENST00000464611 CDCA8Q53HL2 280 aa11.49□□□□□ -0.57
ACTB-208ENST00000464611 MYBBP1AQ9BQG0 1328 aaKnown RBP11.49□□□□□ -0.57
ACTB-208ENST00000464611 TRPM1Q7Z4N2 1603 aa11.49□□□□□ -0.57
ACTB-208ENST00000464611 ST20-MTHFSA0A0A6YYL1 179 aa11.48□□□□□ -0.57
ACTB-208ENST00000464611 PDE3BQ13370 1112 aa11.48□□□□□ -0.57
ACTB-208ENST00000464611 PNISRQ8TF01 805 aaKnown RBP11.48□□□□□ -0.57
ACTB-208ENST00000464611 NEURL4Q96JN8 1562 aa11.48□□□□□ -0.57
ACTB-208ENST00000464611 C3P01024 1663 aa11.48□□□□□ -0.57
ACTB-208ENST00000464611 KDM2AQ9Y2K7 1162 aa11.47□□□□□ -0.57
ACTB-208ENST00000464611 ARHGAP31Q2M1Z3 1444 aa11.46□□□□□ -0.57
ACTB-208ENST00000464611 TMF1P82094 1093 aa11.46□□□□□ -0.57
ACTB-208ENST00000464611 NUDCQ9Y266 331 aa11.46□□□□□ -0.57
ACTB-208ENST00000464611 E9PCH4 1651 aa11.46□□□□□ -0.58
ACTB-208ENST00000464611 PREX1Q8TCU6 1659 aa11.46□□□□□ -0.58
ACTB-208ENST00000464611 PLA2R1Q13018 1463 aa11.45□□□□□ -0.58
ACTB-208ENST00000464611 LRPPRCP42704 1394 aaKnown RBP11.45□□□□□ -0.58
ACTB-208ENST00000464611 RNF123Q5XPI4 1314 aa11.45□□□□□ -0.58
ACTB-208ENST00000464611 FXR2P51116 673 aaKnown RBP eCLIP11.45□□□□□ -0.58
ACTB-208ENST00000464611 EVX2Q03828 476 aa11.45□□□□□ -0.58
ACTB-208ENST00000464611 CCDC184Q52MB2 194 aa11.45□□□□□ -0.58
ACTB-208ENST00000464611 NLRP13Q86W25 1043 aa11.45□□□□□ -0.58
ACTB-208ENST00000464611 BCANQ96GW7 911 aa11.45□□□□□ -0.58
ACTB-208ENST00000464611 PTPRMP28827 1452 aa11.44□□□□□ -0.58
ACTB-208ENST00000464611 SPHKAPQ2M3C7 1700 aa11.44□□□□□ -0.58
ACTB-208ENST00000464611 SPATA31D1Q6ZQQ2 1576 aa11.44□□□□□ -0.58
ACTB-208ENST00000464611 NPATQ14207 1427 aa11.43□□□□□ -0.58
ACTB-208ENST00000464611 ERVK-7P63135 1459 aa11.43□□□□□ -0.58
ACTB-208ENST00000464611 PTPRTO14522 1441 aa11.43□□□□□ -0.58
ACTB-208ENST00000464611 PITPNM1O00562 1244 aa11.42□□□□□ -0.58
ACTB-208ENST00000464611 ZMYM3Q14202 1370 aa11.41□□□□□ -0.58
ACTB-208ENST00000464611 PARD3Q8TEW0 1356 aa11.41□□□□□ -0.58
ACTB-208ENST00000464611 TRPM2O94759 1503 aa11.41□□□□□ -0.58
ACTB-208ENST00000464611 POLR3GLQ9BT43 218 aa11.41□□□□□ -0.58
ACTB-208ENST00000464611 MYO3AQ8NEV4 1616 aa11.41□□□□□ -0.58
ACTB-208ENST00000464611 RBM19Q9Y4C8 960 aaKnown RBP11.4□□□□□ -0.58
ACTB-208ENST00000464611 FANCIQ9NVI1 1328 aa11.39□□□□□ -0.59
ACTB-208ENST00000464611 PER1O15534 1290 aaPredicted RBP11.39□□□□□ -0.59
ACTB-208ENST00000464611 RGL3Q3MIN7 710 aa11.39□□□□□ -0.59
ACTB-208ENST00000464611 ZNF142P52746 1687 aaPredicted RBP11.39□□□□□ -0.59
ACTB-208ENST00000464611 EIF3AQ14152 1382 aaKnown RBP11.39□□□□□ -0.59
ACTB-208ENST00000464611 KIAA1210Q9ULL0 1709 aa11.38□□□□□ -0.59
ACTB-208ENST00000464611 SYNMO15061 1565 aa11.38□□□□□ -0.59
ACTB-208ENST00000464611 NOS1P29475 1434 aa11.38□□□□□ -0.59
ACTB-208ENST00000464611 KDM4FA0A1W2PPD8 638 aa11.38□□□□□ -0.59
ACTB-208ENST00000464611 TESK2Q96S53 571 aa11.38□□□□□ -0.59
ACTB-208ENST00000464611 NPC1L1Q9UHC9 1359 aa11.38□□□□□ -0.59
ACTB-208ENST00000464611 PIK3C2BO00750 1634 aa11.38□□□□□ -0.59
ACTB-208ENST00000464611 NLRP1Q9C000 1473 aa11.38□□□□□ -0.59
ACTB-208ENST00000464611 KDM5AP29375 1690 aaKnown RBP11.37□□□□□ -0.59
ACTB-208ENST00000464611 TNRQ92752 1358 aa11.37□□□□□ -0.59
ACTB-208ENST00000464611 NGEFQ8N5V2 710 aa11.36□□□□□ -0.59
ACTB-208ENST00000464611 ANP32EQ9BTT0 268 aa11.36□□□□□ -0.59
ACTB-208ENST00000464611 CEP170BQ9Y4F5 1589 aaPredicted RBP11.36□□□□□ -0.59
ACTB-208ENST00000464611 CLTCL1P53675 1640 aa11.35□□□□□ -0.59
ACTB-208ENST00000464611 NBPF1Q3BBV0 1214 aa11.35□□□□□ -0.59
ACTB-208ENST00000464611 SCAF11Q99590 1463 aaKnown RBP11.35□□□□□ -0.59
ACTB-208ENST00000464611 ADGRB3O60242 1522 aa11.35□□□□□ -0.59
ACTB-208ENST00000464611 KIF1BO60333 1816 aa11.34□□□□□ -0.59
ACTB-208ENST00000464611 LHX8Q68G74 356 aa11.33□□□□□ -0.6
ACTB-208ENST00000464611 ZBTB12Q9Y330 459 aaPredicted RBP11.33□□□□□ -0.6
ACTB-208ENST00000464611 KNSTRNQ9Y448 316 aa11.33□□□□□ -0.6
ACTB-208ENST00000464611 CFAP65Q6ZU64 1925 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms