RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 RSPH6AQ9H0K4 717 aa7.49□□□□□ -1.21
HMGXB4-205ENST00000464480 PSEN2P49810 448 aa7.48□□□□□ -1.21
HMGXB4-205ENST00000464480 SH3D19Q5HYK7 790 aa7.48□□□□□ -1.21
HMGXB4-205ENST00000464480 SULF1Q8IWU6 871 aa7.48□□□□□ -1.21
HMGXB4-205ENST00000464480 PCMTD1Q96MG8 357 aaPredicted RBP7.48□□□□□ -1.21
HMGXB4-205ENST00000464480 SLC4A5Q9BY07 1137 aa7.47□□□□□ -1.21
HMGXB4-205ENST00000464480 TMEM134Q9H6X4 195 aa7.47□□□□□ -1.21
HMGXB4-205ENST00000464480 MYT1LQ9UL68 1186 aa7.47□□□□□ -1.21
HMGXB4-205ENST00000464480 MMRN1Q13201 1228 aa7.46□□□□□ -1.22
HMGXB4-205ENST00000464480 DIXDC1Q155Q3 683 aa7.46□□□□□ -1.22
HMGXB4-205ENST00000464480 ADGRD1Q6QNK2 874 aa7.46□□□□□ -1.22
HMGXB4-205ENST00000464480 KIAA1468Q9P260 1216 aa7.46□□□□□ -1.22
HMGXB4-205ENST00000464480 RABGEF1Q9UJ41 708 aa7.46□□□□□ -1.22
HMGXB4-205ENST00000464480 C3orf80F5H4A9 247 aa7.45□□□□□ -1.22
HMGXB4-205ENST00000464480 SMAPO00193 183 aa7.45□□□□□ -1.22
HMGXB4-205ENST00000464480 POTEEQ6S8J3 1075 aa7.45□□□□□ -1.22
HMGXB4-205ENST00000464480 DDX11L8A8MPP1 907 aa7.44□□□□□ -1.22
HMGXB4-205ENST00000464480 SKIV2LQ15477 1246 aaKnown RBP7.43□□□□□ -1.22
HMGXB4-205ENST00000464480 DMRTA1Q5VZB9 504 aa7.43□□□□□ -1.22
HMGXB4-205ENST00000464480 RNF166Q96A37 237 aaPredicted RBP7.43□□□□□ -1.22
HMGXB4-205ENST00000464480 ATP1B4Q9UN42 357 aaPredicted RBP7.43□□□□□ -1.22
HMGXB4-205ENST00000464480 CD46P15529 392 aa7.42□□□□□ -1.22
HMGXB4-205ENST00000464480 SLC4A3P48751 1232 aa7.42□□□□□ -1.22
HMGXB4-205ENST00000464480 NBPF3Q9H094 633 aa7.42□□□□□ -1.22
HMGXB4-205ENST00000464480 VPS9D1Q9Y2B5 631 aa7.42□□□□□ -1.22
HMGXB4-205ENST00000464480 CLK2P49760 499 aaKnown RBP7.41□□□□□ -1.22
HMGXB4-205ENST00000464480 HDGFP51858 240 aaKnown RBP7.41□□□□□ -1.22
HMGXB4-205ENST00000464480 RSPH4AQ5TD94 716 aa7.41□□□□□ -1.22
HMGXB4-205ENST00000464480 MYSM1Q5VVJ2 828 aa7.41□□□□□ -1.22
HMGXB4-205ENST00000464480 RDH13Q8NBN7 331 aa7.41□□□□□ -1.22
HMGXB4-205ENST00000464480 TBC1D2Q9BYX2 928 aa7.41□□□□□ -1.22
HMGXB4-205ENST00000464480 SEPT9Q9UHD8 586 aaPredicted RBP7.41□□□□□ -1.22
HMGXB4-205ENST00000464480 GOLGA8CPA6NN73 597 aa7.4□□□□□ -1.22
HMGXB4-205ENST00000464480 FAM98CQ17RN3 349 aaKnown RBP7.4□□□□□ -1.22
HMGXB4-205ENST00000464480 LAPTM4BQ86VI4 370 aa7.4□□□□□ -1.22
HMGXB4-205ENST00000464480 NUTM1Q86Y26 1132 aa7.4□□□□□ -1.22
HMGXB4-205ENST00000464480 POLR3EQ9NVU0 708 aa7.39□□□□□ -1.23
HMGXB4-205ENST00000464480 FLIIQ13045 1269 aa7.38□□□□□ -1.23
HMGXB4-205ENST00000464480 SWT1Q5T5J6 900 aaKnown RBP7.38□□□□□ -1.23
HMGXB4-205ENST00000464480 MRPL50Q8N5N7 158 aaKnown RBP7.38□□□□□ -1.23
HMGXB4-205ENST00000464480 SPIRE2Q8WWL2 714 aa7.38□□□□□ -1.23
HMGXB4-205ENST00000464480 HRO43593 1189 aa7.37□□□□□ -1.23
HMGXB4-205ENST00000464480 SLF2Q8IX21 1173 aa7.37□□□□□ -1.23
HMGXB4-205ENST00000464480 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.36□□□□□ -1.23
HMGXB4-205ENST00000464480 KDM4AO75164 1064 aa7.35□□□□□ -1.23
HMGXB4-205ENST00000464480 USP46P62068 366 aa7.35□□□□□ -1.23
HMGXB4-205ENST00000464480 RIC3Q7Z5B4 369 aa7.35□□□□□ -1.23
HMGXB4-205ENST00000464480 PROCA1Q8NCQ7 364 aaPredicted RBP7.35□□□□□ -1.23
HMGXB4-205ENST00000464480 BHMG1C9JSJ3 638 aaPredicted RBP7.34□□□□□ -1.23
HMGXB4-205ENST00000464480 RNF40O75150 1001 aa7.34□□□□□ -1.23
HMGXB4-205ENST00000464480 GCGRP47871 477 aa7.34□□□□□ -1.23
HMGXB4-205ENST00000464480 TUSC1Q2TAM9 212 aa7.34□□□□□ -1.23
HMGXB4-205ENST00000464480 RSBN1LQ6PCB5 846 aaPredicted RBP7.34□□□□□ -1.23
HMGXB4-205ENST00000464480 SAMD7Q7Z3H4 446 aa7.34□□□□□ -1.23
HMGXB4-205ENST00000464480 NECTIN2Q92692 538 aa7.34□□□□□ -1.23
HMGXB4-205ENST00000464480 SPTLC1O15269 473 aa7.33□□□□□ -1.24
HMGXB4-205ENST00000464480 GJA5P36382 358 aa7.33□□□□□ -1.24
HMGXB4-205ENST00000464480 HCSTQ9UBK5 93 aa7.33□□□□□ -1.24
HMGXB4-205ENST00000464480 LIMD1Q9UGP4 676 aa7.33□□□□□ -1.24
HMGXB4-205ENST00000464480 MOXD2PA6NHM9 499 aa7.32□□□□□ -1.24
HMGXB4-205ENST00000464480 SLC10A3P09131 477 aa7.32□□□□□ -1.24
HMGXB4-205ENST00000464480 ZFRQ96KR1 1074 aaKnown RBP7.32□□□□□ -1.24
HMGXB4-205ENST00000464480 HOXA2O43364 376 aa7.31□□□□□ -1.24
HMGXB4-205ENST00000464480 CFHP08603 1231 aa7.31□□□□□ -1.24
HMGXB4-205ENST00000464480 GRIPAP1Q4V328 841 aa7.31□□□□□ -1.24
HMGXB4-205ENST00000464480 ANKK1Q8NFD2 765 aa7.31□□□□□ -1.24
HMGXB4-205ENST00000464480 KCTD12Q96CX2 325 aaKnown RBP7.31□□□□□ -1.24
HMGXB4-205ENST00000464480 LRCH3Q96II8 777 aa7.31□□□□□ -1.24
HMGXB4-205ENST00000464480 NDUFV2P19404 249 aa7.3□□□□□ -1.24
HMGXB4-205ENST00000464480 RFC5P40937 340 aa7.3□□□□□ -1.24
HMGXB4-205ENST00000464480 MCM6Q14566 821 aa7.3□□□□□ -1.24
HMGXB4-205ENST00000464480 KMT5BQ4FZB7 885 aa7.3□□□□□ -1.24
HMGXB4-205ENST00000464480 PPP2R2DQ66LE6 453 aa7.3□□□□□ -1.24
HMGXB4-205ENST00000464480 WNT2BQ93097 391 aa7.3□□□□□ -1.24
HMGXB4-205ENST00000464480 ZMYND15Q9H091 742 aa7.3□□□□□ -1.24
HMGXB4-205ENST00000464480 CSPP1Q1MSJ5 1256 aa7.29□□□□□ -1.24
HMGXB4-205ENST00000464480 PRPF38BQ5VTL8 546 aaKnown RBP7.29□□□□□ -1.24
HMGXB4-205ENST00000464480 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.29□□□□□ -1.24
HMGXB4-205ENST00000464480 FDX1P10109 184 aa7.28□□□□□ -1.24
HMGXB4-205ENST00000464480 TMEM259Q4ZIN3 620 aa7.28□□□□□ -1.24
HMGXB4-205ENST00000464480 BANK1Q8NDB2 785 aa7.28□□□□□ -1.24
HMGXB4-205ENST00000464480 PRR14Q9BWN1 585 aa7.28□□□□□ -1.24
HMGXB4-205ENST00000464480 ZBTB3Q9H5J0 574 aa7.28□□□□□ -1.24
HMGXB4-205ENST00000464480 SPDYE5A6NIY4 337 aa7.27□□□□□ -1.25
HMGXB4-205ENST00000464480 NUTM2BA6NNL0 878 aaPredicted RBP7.27□□□□□ -1.25
HMGXB4-205ENST00000464480 NUTM2EB1AL46 878 aaPredicted RBP7.27□□□□□ -1.25
HMGXB4-205ENST00000464480 UBTFP17480 764 aaKnown RBP7.27□□□□□ -1.25
HMGXB4-205ENST00000464480 FUT2Q10981 343 aa7.27□□□□□ -1.25
HMGXB4-205ENST00000464480 NUTM2DQ5VT03 806 aaPredicted RBP7.27□□□□□ -1.25
HMGXB4-205ENST00000464480 NUTM2AQ8IVF1 878 aaPredicted RBP7.27□□□□□ -1.25
HMGXB4-205ENST00000464480 LILRB3O75022 631 aa7.26□□□□□ -1.25
HMGXB4-205ENST00000464480 QPCTQ16769 361 aa7.26□□□□□ -1.25
HMGXB4-205ENST00000464480 PCDHB15Q9Y5E8 787 aa7.26□□□□□ -1.25
HMGXB4-205ENST00000464480 ATP6V1AP38606 617 aa7.25□□□□□ -1.25
HMGXB4-205ENST00000464480 MTMR2Q13614 643 aa7.25□□□□□ -1.25
HMGXB4-205ENST00000464480 THSD4Q6ZMP0 1018 aa7.25□□□□□ -1.25
HMGXB4-205ENST00000464480 SOWAHBA6NEL2 793 aa7.24□□□□□ -1.25
HMGXB4-205ENST00000464480 APBB1O00213 710 aa7.24□□□□□ -1.25
HMGXB4-205ENST00000464480 ACTN4O43707 911 aaKnown RBP7.24□□□□□ -1.25
HMGXB4-205ENST00000464480 PTPN5P54829 565 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms