RNA–Protein interactions for RNA: ENST00000463709.1

TM9SF2-202, Transcript of transmembrane 9 superfamily member 2, humanhuman

TSL 3

Gene TM9SF2, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-202ENST00000463709 HDGFP51858 240 aaKnown RBP10.58□□□□□ -0.72
TM9SF2-202ENST00000463709 CCDC102AQ96A19 550 aa10.58□□□□□ -0.72
TM9SF2-202ENST00000463709 MAP2K5Q13163 448 aa10.57□□□□□ -0.72
TM9SF2-202ENST00000463709 AK7Q96M32 723 aa10.57□□□□□ -0.72
TM9SF2-202ENST00000463709 IRF6O14896 467 aa10.56□□□□□ -0.72
TM9SF2-202ENST00000463709 RNF40O75150 1001 aa10.56□□□□□ -0.72
TM9SF2-202ENST00000463709 MTRQ99707 1265 aa10.56□□□□□ -0.72
TM9SF2-202ENST00000463709 IL21Q9HBE4 155 aa10.55□□□□□ -0.72
TM9SF2-202ENST00000463709 TRIM66O15016 1216 aa10.54□□□□□ -0.72
TM9SF2-202ENST00000463709 MINK1Q8N4C8 1332 aaPredicted RBP10.54□□□□□ -0.72
TM9SF2-202ENST00000463709 APLP1P51693 650 aa10.53□□□□□ -0.72
TM9SF2-202ENST00000463709 NLRP7Q8WX94 980 aa10.53□□□□□ -0.72
TM9SF2-202ENST00000463709 BRPF1P55201 1214 aaPredicted RBP10.52□□□□□ -0.73
TM9SF2-202ENST00000463709 NEUROD2Q15784 382 aa10.52□□□□□ -0.73
TM9SF2-202ENST00000463709 SWT1Q5T5J6 900 aaKnown RBP10.52□□□□□ -0.73
TM9SF2-202ENST00000463709 NECTIN2Q92692 538 aa10.51□□□□□ -0.73
TM9SF2-202ENST00000463709 GPBP1L1Q9HC44 474 aaPredicted RBP10.51□□□□□ -0.73
TM9SF2-202ENST00000463709 PHOX2BQ99453 314 aa10.5□□□□□ -0.73
TM9SF2-202ENST00000463709 EYA1Q99502 592 aa10.5□□□□□ -0.73
TM9SF2-202ENST00000463709 Q6ZNB5 142 aa10.49□□□□□ -0.73
TM9SF2-202ENST00000463709 SLF2Q8IX21 1173 aa10.49□□□□□ -0.73
TM9SF2-202ENST00000463709 ZNF516Q92618 1163 aa10.49□□□□□ -0.73
TM9SF2-202ENST00000463709 PDE4DQ08499 809 aa10.48□□□□□ -0.73
TM9SF2-202ENST00000463709 PPP1R18Q6NYC8 613 aa10.48□□□□□ -0.73
TM9SF2-202ENST00000463709 ADGRG1Q9Y653 693 aa10.48□□□□□ -0.73
TM9SF2-202ENST00000463709 SLC4A3P48751 1232 aa10.46□□□□□ -0.73
TM9SF2-202ENST00000463709 LAPTM4AQ15012 233 aa10.46□□□□□ -0.73
TM9SF2-202ENST00000463709 PRKD2Q9BZL6 878 aa10.46□□□□□ -0.73
TM9SF2-202ENST00000463709 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.44□□□□□ -0.74
TM9SF2-202ENST00000463709 COPS2P61201 443 aa10.43□□□□□ -0.74
TM9SF2-202ENST00000463709 MDM2Q00987 491 aaPredicted RBP10.43□□□□□ -0.74
TM9SF2-202ENST00000463709 TTLL12Q14166 644 aaPredicted RBP10.43□□□□□ -0.74
TM9SF2-202ENST00000463709 METTL3Q86U44 580 aaKnown RBP10.43□□□□□ -0.74
TM9SF2-202ENST00000463709 NKX2-3Q8TAU0 364 aa10.43□□□□□ -0.74
TM9SF2-202ENST00000463709 REPIN1Q9BWE0 567 aaKnown RBP10.43□□□□□ -0.74
TM9SF2-202ENST00000463709 V9GY48 417 aaPredicted RBP10.43□□□□□ -0.74
TM9SF2-202ENST00000463709 GFRA3O60609 400 aa10.42□□□□□ -0.74
TM9SF2-202ENST00000463709 PXYLP1Q8TE99 480 aa10.42□□□□□ -0.74
TM9SF2-202ENST00000463709 PARP9Q8IXQ6 854 aa10.41□□□□□ -0.74
TM9SF2-202ENST00000463709 PRR14Q9BWN1 585 aa10.41□□□□□ -0.74
TM9SF2-202ENST00000463709 KDM4CQ9H3R0 1056 aa10.41□□□□□ -0.74
TM9SF2-202ENST00000463709 OATP04181 439 aa10.4□□□□□ -0.74
TM9SF2-202ENST00000463709 DNAJB2P25686 324 aa10.4□□□□□ -0.74
TM9SF2-202ENST00000463709 ZPR1O75312 459 aa10.39□□□□□ -0.75
TM9SF2-202ENST00000463709 AMHR2Q16671 573 aa10.39□□□□□ -0.75
TM9SF2-202ENST00000463709 RBM46Q8TBY0 533 aaKnown RBP10.39□□□□□ -0.75
TM9SF2-202ENST00000463709 RCCD1A6NED2 376 aa10.38□□□□□ -0.75
TM9SF2-202ENST00000463709 GGCXP38435 758 aa10.38□□□□□ -0.75
TM9SF2-202ENST00000463709 TMEM134Q9H6X4 195 aa10.38□□□□□ -0.75
TM9SF2-202ENST00000463709 PCDHB3Q9Y5E6 796 aa10.38□□□□□ -0.75
TM9SF2-202ENST00000463709 LCE2BO14633 110 aa10.36□□□□□ -0.75
TM9SF2-202ENST00000463709 GIGYF2Q6Y7W6 1299 aaKnown RBP10.36□□□□□ -0.75
TM9SF2-202ENST00000463709 IL27Q8NEV9 243 aa10.36□□□□□ -0.75
TM9SF2-202ENST00000463709 TMUB1Q9BVT8 246 aa10.36□□□□□ -0.75
TM9SF2-202ENST00000463709 NRG2O14511 850 aaPredicted RBP10.35□□□□□ -0.75
TM9SF2-202ENST00000463709 BLOC1S3Q6QNY0 202 aa10.34□□□□□ -0.75
TM9SF2-202ENST00000463709 FAM117AQ9C073 453 aa10.34□□□□□ -0.75
TM9SF2-202ENST00000463709 MS4A1P11836 297 aa10.33□□□□□ -0.76
TM9SF2-202ENST00000463709 TRAF7Q6Q0C0 670 aa10.33□□□□□ -0.76
TM9SF2-202ENST00000463709 GPCPD1Q9NPB8 672 aa10.33□□□□□ -0.76
TM9SF2-202ENST00000463709 CLCN1P35523 988 aa10.32□□□□□ -0.76
TM9SF2-202ENST00000463709 KMT5BQ4FZB7 885 aa10.31□□□□□ -0.76
TM9SF2-202ENST00000463709 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.3□□□□□ -0.76
TM9SF2-202ENST00000463709 ACTN4O43707 911 aaKnown RBP10.3□□□□□ -0.76
TM9SF2-202ENST00000463709 SSTR3P32745 418 aaPredicted RBP10.3□□□□□ -0.76
TM9SF2-202ENST00000463709 TLL1O43897 1013 aa10.29□□□□□ -0.76
TM9SF2-202ENST00000463709 CFHP08603 1231 aa10.29□□□□□ -0.76
TM9SF2-202ENST00000463709 PDZRN3Q9UPQ7 1066 aa10.29□□□□□ -0.76
TM9SF2-202ENST00000463709 RNF223E7ERA6 249 aa10.28□□□□□ -0.76
TM9SF2-202ENST00000463709 FAM217BQ9NTX9 383 aaPredicted RBP10.28□□□□□ -0.76
TM9SF2-202ENST00000463709 DDX11L8A8MPP1 907 aa10.27□□□□□ -0.77
TM9SF2-202ENST00000463709 SLC10A3P09131 477 aa10.27□□□□□ -0.77
TM9SF2-202ENST00000463709 PLEKHG3A1L390 1219 aa10.26□□□□□ -0.77
TM9SF2-202ENST00000463709 DAXXQ9UER7 740 aaPredicted RBP10.26□□□□□ -0.77
TM9SF2-202ENST00000463709 EMID1Q96A84 441 aaPredicted RBP10.24□□□□□ -0.77
TM9SF2-202ENST00000463709 BEGAINQ9BUH8 593 aa10.24□□□□□ -0.77
TM9SF2-202ENST00000463709 SLC19A1P41440 591 aa10.23□□□□□ -0.77
TM9SF2-202ENST00000463709 TMEM132AQ24JP5 1023 aa10.23□□□□□ -0.77
TM9SF2-202ENST00000463709 ANKLE1Q8NAG6 615 aa10.23□□□□□ -0.77
TM9SF2-202ENST00000463709 RDH13Q8NBN7 331 aa10.23□□□□□ -0.77
TM9SF2-202ENST00000463709 NR1I2O75469 434 aa10.22□□□□□ -0.77
TM9SF2-202ENST00000463709 S1PR4O95977 384 aa10.22□□□□□ -0.77
TM9SF2-202ENST00000463709 ADH1BP00325 375 aa10.21□□□□□ -0.77
TM9SF2-202ENST00000463709 PPEF1O14829 653 aaPredicted RBP10.2□□□□□ -0.78
TM9SF2-202ENST00000463709 TRIM67Q6ZTA4 783 aa10.2□□□□□ -0.78
TM9SF2-202ENST00000463709 CD46P15529 392 aa10.19□□□□□ -0.78
TM9SF2-202ENST00000463709 RSPH4AQ5TD94 716 aa10.19□□□□□ -0.78
TM9SF2-202ENST00000463709 SPRYD7Q5W111 196 aa10.19□□□□□ -0.78
TM9SF2-202ENST00000463709 DDRGK1Q96HY6 314 aa10.19□□□□□ -0.78
TM9SF2-202ENST00000463709 ZNF598Q86UK7 904 aaKnown RBP10.17□□□□□ -0.78
TM9SF2-202ENST00000463709 SCUBE3Q8IX30 993 aa10.17□□□□□ -0.78
TM9SF2-202ENST00000463709 LIAT1Q6ZQX7 453 aa10.16□□□□□ -0.78
TM9SF2-202ENST00000463709 SULF1Q8IWU6 871 aa10.16□□□□□ -0.78
TM9SF2-202ENST00000463709 SLC6A16Q9GZN6 736 aa10.16□□□□□ -0.78
TM9SF2-202ENST00000463709 PUS10Q3MIT2 529 aaKnown RBP10.15□□□□□ -0.78
TM9SF2-202ENST00000463709 TBC1D2Q9BYX2 928 aa10.15□□□□□ -0.78
TM9SF2-202ENST00000463709 POLR3EQ9NVU0 708 aa10.15□□□□□ -0.78
TM9SF2-202ENST00000463709 PRR20EP86478 221 aa10.14□□□□□ -0.79
TM9SF2-202ENST00000463709 PRR20CP86479 221 aa10.14□□□□□ -0.79
TM9SF2-202ENST00000463709 PRR20DP86480 221 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms