RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 STAG3Q9UJ98 1225 aa26.65■■□□□ 1.86
CCDC78-206ENST00000463539 NEXMIFQ5QGS0 1516 aa26.65■■□□□ 1.86
CCDC78-206ENST00000463539 TNRQ92752 1358 aa26.64■■□□□ 1.86
CCDC78-206ENST00000463539 FER1L4A9Z1Z3 1794 aa26.63■■□□□ 1.85
CCDC78-206ENST00000463539 PIK3C2GO75747 1445 aa26.62■■□□□ 1.85
CCDC78-206ENST00000463539 VGFO15240 615 aaPredicted RBP26.62■■□□□ 1.85
CCDC78-206ENST00000463539 DDX10Q13206 875 aaKnown RBP26.62■■□□□ 1.85
CCDC78-206ENST00000463539 WASHC2AQ641Q2 1341 aa26.62■■□□□ 1.85
CCDC78-206ENST00000463539 KIAA1210Q9ULL0 1709 aa26.61■■□□□ 1.85
CCDC78-206ENST00000463539 ST20-MTHFSA0A0A6YYL1 179 aa26.6■■□□□ 1.85
CCDC78-206ENST00000463539 CFAP70Q5T0N1 1121 aa26.59■■□□□ 1.85
CCDC78-206ENST00000463539 ZFYVE9O95405 1425 aa26.59■■□□□ 1.85
CCDC78-206ENST00000463539 A2ML1A8K2U0 1454 aa26.58■■□□□ 1.85
CCDC78-206ENST00000463539 CEBPAP49715 358 aaPredicted RBP26.58■■□□□ 1.84
CCDC78-206ENST00000463539 CCDC7Q96M83 1385 aa26.57■■□□□ 1.84
CCDC78-206ENST00000463539 C11orf95C9JLR9 678 aaPredicted RBP26.56■■□□□ 1.84
CCDC78-206ENST00000463539 NUTM2DQ5VT03 806 aaPredicted RBP26.56■■□□□ 1.84
CCDC78-206ENST00000463539 C3P01024 1663 aa26.55■■□□□ 1.84
CCDC78-206ENST00000463539 MYO5BQ9ULV0 1848 aa26.55■■□□□ 1.84
CCDC78-206ENST00000463539 SCAF11Q99590 1463 aaKnown RBP26.55■■□□□ 1.84
CCDC78-206ENST00000463539 KIF7Q2M1P5 1343 aa26.53■■□□□ 1.84
CCDC78-206ENST00000463539 C14orf93Q9H972 538 aaKnown RBP26.53■■□□□ 1.84
CCDC78-206ENST00000463539 NLRP1Q9C000 1473 aa26.52■■□□□ 1.84
CCDC78-206ENST00000463539 IQGAP1P46940 1657 aa26.51■■□□□ 1.83
CCDC78-206ENST00000463539 SETBP1Q9Y6X0 1596 aa26.5■■□□□ 1.83
CCDC78-206ENST00000463539 PLPPR3Q6T4P5 718 aa26.5■■□□□ 1.83
CCDC78-206ENST00000463539 EIF3AQ14152 1382 aaKnown RBP26.5■■□□□ 1.83
CCDC78-206ENST00000463539 MIER1Q8N108 512 aa26.49■■□□□ 1.83
CCDC78-206ENST00000463539 RIMS2Q9UQ26 1411 aa26.49■■□□□ 1.83
CCDC78-206ENST00000463539 POLR1AO95602 1720 aaPredicted RBP26.47■■□□□ 1.83
CCDC78-206ENST00000463539 KDM5AP29375 1690 aaKnown RBP26.47■■□□□ 1.83
CCDC78-206ENST00000463539 ADAMTSL3P82987 1691 aa26.47■■□□□ 1.83
CCDC78-206ENST00000463539 RIMS1Q86UR5 1692 aaKnown RBP26.46■■□□□ 1.83
CCDC78-206ENST00000463539 ADGRB1O14514 1584 aa26.45■■□□□ 1.82
CCDC78-206ENST00000463539 TESK2Q96S53 571 aa26.44■■□□□ 1.82
CCDC78-206ENST00000463539 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.44■■□□□ 1.82
CCDC78-206ENST00000463539 UBR1Q8IWV7 1749 aa26.42■■□□□ 1.82
CCDC78-206ENST00000463539 HDGFP51858 240 aaKnown RBP26.41■■□□□ 1.82
CCDC78-206ENST00000463539 POLR3GLQ9BT43 218 aa26.41■■□□□ 1.82
CCDC78-206ENST00000463539 TMEM2Q9UHN6 1383 aa26.41■■□□□ 1.82
CCDC78-206ENST00000463539 TMEM132EQ6IEE7 984 aa26.39■■□□□ 1.82
CCDC78-206ENST00000463539 TMF1P82094 1093 aa26.38■■□□□ 1.81
CCDC78-206ENST00000463539 SENP3Q9H4L4 574 aaPredicted RBP26.37■■□□□ 1.81
CCDC78-206ENST00000463539 MYO3AQ8NEV4 1616 aa26.37■■□□□ 1.81
CCDC78-206ENST00000463539 DISP3Q9P2K9 1392 aa26.36■■□□□ 1.81
CCDC78-206ENST00000463539 TRAK1Q9UPV9 953 aa26.35■■□□□ 1.81
CCDC78-206ENST00000463539 ALKQ9UM73 1620 aa26.34■■□□□ 1.81
CCDC78-206ENST00000463539 ASXL1Q8IXJ9 1541 aa26.34■■□□□ 1.81
CCDC78-206ENST00000463539 ANP32CO43423 234 aa26.32■■□□□ 1.8
CCDC78-206ENST00000463539 CENPJQ9HC77 1338 aaPredicted RBP26.31■■□□□ 1.8
CCDC78-206ENST00000463539 SLC24A1O60721 1099 aa26.31■■□□□ 1.8
CCDC78-206ENST00000463539 THEMISQ8N1K5 641 aaPredicted RBP26.3■■□□□ 1.8
CCDC78-206ENST00000463539 SBNO2Q9Y2G9 1366 aa26.29■■□□□ 1.8
CCDC78-206ENST00000463539 CEP170BQ9Y4F5 1589 aaPredicted RBP26.29■■□□□ 1.8
CCDC78-206ENST00000463539 SLIT1O75093 1534 aa26.28■■□□□ 1.8
CCDC78-206ENST00000463539 ARHGAP23Q9P227 1491 aa26.28■■□□□ 1.8
CCDC78-206ENST00000463539 CDCA8Q53HL2 280 aa26.28■■□□□ 1.8
CCDC78-206ENST00000463539 EID1Q9Y6B2 187 aa26.28■■□□□ 1.8
CCDC78-206ENST00000463539 YTHDC2Q9H6S0 1430 aaKnown RBP26.27■■□□□ 1.8
CCDC78-206ENST00000463539 PTPRMP28827 1452 aa26.27■■□□□ 1.8
CCDC78-206ENST00000463539 NRXN3Q9Y4C0 1643 aa26.26■■□□□ 1.79
CCDC78-206ENST00000463539 TXNDC2Q86VQ3 553 aa26.25■■□□□ 1.79
CCDC78-206ENST00000463539 LTKP29376 864 aa26.25■■□□□ 1.79
CCDC78-206ENST00000463539 STK26Q9P289 416 aa26.25■■□□□ 1.79
CCDC78-206ENST00000463539 PLEKHG1Q9ULL1 1385 aa26.24■■□□□ 1.79
CCDC78-206ENST00000463539 BCANQ96GW7 911 aa26.24■■□□□ 1.79
CCDC78-206ENST00000463539 ARHGEF28Q8N1W1 1705 aaKnown RBP26.22■■□□□ 1.79
CCDC78-206ENST00000463539 SETD1AO15047 1707 aaKnown RBP26.22■■□□□ 1.79
CCDC78-206ENST00000463539 QRICH2Q9H0J4 1663 aa26.2■■□□□ 1.78
CCDC78-206ENST00000463539 LRPPRCP42704 1394 aaKnown RBP26.2■■□□□ 1.78
CCDC78-206ENST00000463539 ZNF142P52746 1687 aaPredicted RBP26.2■■□□□ 1.78
CCDC78-206ENST00000463539 METP08581 1390 aa26.18■■□□□ 1.78
CCDC78-206ENST00000463539 ADAMTS13Q76LX8 1427 aa26.17■■□□□ 1.78
CCDC78-206ENST00000463539 DLC1Q96QB1 1528 aa26.15■■□□□ 1.78
CCDC78-206ENST00000463539 ABCC11Q96J66 1382 aa26.15■■□□□ 1.78
CCDC78-206ENST00000463539 PRAM1Q96QH2 718 aa26.14■■□□□ 1.78
CCDC78-206ENST00000463539 POGKQ9P215 609 aa26.14■■□□□ 1.78
CCDC78-206ENST00000463539 SAFB2Q14151 953 aaKnown RBP eCLIP26.12■■□□□ 1.77
CCDC78-206ENST00000463539 SETD1BQ9UPS6 1966 aaKnown RBP26.12■■□□□ 1.77
CCDC78-206ENST00000463539 CCER2I3L3R5 266 aa26.11■■□□□ 1.77
CCDC78-206ENST00000463539 PRKRIP1Q9H875 184 aaPredicted RBP26.11■■□□□ 1.77
CCDC78-206ENST00000463539 MED14O60244 1454 aa26.11■■□□□ 1.77
CCDC78-206ENST00000463539 EVC2Q86UK5 1308 aa26.1■■□□□ 1.77
CCDC78-206ENST00000463539 SLC26A8Q96RN1 970 aa26.09■■□□□ 1.77
CCDC78-206ENST00000463539 PANK3Q9H999 370 aa26.09■■□□□ 1.77
CCDC78-206ENST00000463539 TECPR2O15040 1411 aa26.09■■□□□ 1.77
CCDC78-206ENST00000463539 TULP4Q9NRJ4 1543 aa26.07■■□□□ 1.76
CCDC78-206ENST00000463539 ANKLE2Q86XL3 938 aa26.07■■□□□ 1.76
CCDC78-206ENST00000463539 DIP2AQ14689 1571 aa26.07■■□□□ 1.76
CCDC78-206ENST00000463539 TBX22Q9Y458 520 aa26.06■■□□□ 1.76
CCDC78-206ENST00000463539 MINK1Q8N4C8 1332 aaPredicted RBP26.05■■□□□ 1.76
CCDC78-206ENST00000463539 MYOM1P52179 1685 aa26.05■■□□□ 1.76
CCDC78-206ENST00000463539 KNDC1Q76NI1 1749 aa26.05■■□□□ 1.76
CCDC78-206ENST00000463539 PUS7Q96PZ0 661 aaKnown RBP26.04■■□□□ 1.76
CCDC78-206ENST00000463539 FAM135BQ49AJ0 1406 aa26.04■■□□□ 1.76
CCDC78-206ENST00000463539 CPS1P31327 1500 aa26.04■■□□□ 1.76
CCDC78-206ENST00000463539 PER1O15534 1290 aaPredicted RBP26.04■■□□□ 1.76
CCDC78-206ENST00000463539 SIRT1Q96EB6 747 aa26.04■■□□□ 1.76
CCDC78-206ENST00000463539 WAPLQ7Z5K2 1190 aa26.03■■□□□ 1.76
CCDC78-206ENST00000463539 PLEKHH1Q9ULM0 1364 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms