RNA–Protein interactions for RNA: ENST00000463317.6

VAMP7-204, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 5

Gene VAMP7, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-204ENST00000463317 SPINK5Q9NQ38 1064 aaPredicted RBP9.85□□□□□ -0.83
VAMP7-204ENST00000463317 DHX29Q7Z478 1369 aaKnown RBP9.85□□□□□ -0.83
VAMP7-204ENST00000463317 ZNF777Q9ULD5 760 aaPredicted RBP9.84□□□□□ -0.83
VAMP7-204ENST00000463317 ATP1B4Q9UN42 357 aaPredicted RBP9.84□□□□□ -0.83
VAMP7-204ENST00000463317 SETD5Q9C0A6 1442 aa9.83□□□□□ -0.84
VAMP7-204ENST00000463317 KIF3BO15066 747 aa9.83□□□□□ -0.84
VAMP7-204ENST00000463317 ERVK-7P63135 1459 aa9.83□□□□□ -0.84
VAMP7-204ENST00000463317 TET3O43151 1660 aa9.83□□□□□ -0.84
VAMP7-204ENST00000463317 C1QTNF8P60827 252 aa9.82□□□□□ -0.84
VAMP7-204ENST00000463317 TRPC5Q9UL62 973 aaPredicted RBP9.82□□□□□ -0.84
VAMP7-204ENST00000463317 EID1Q9Y6B2 187 aa9.82□□□□□ -0.84
VAMP7-204ENST00000463317 MAST1Q9Y2H9 1570 aa9.82□□□□□ -0.84
VAMP7-204ENST00000463317 ATRNO75882 1429 aa9.82□□□□□ -0.84
VAMP7-204ENST00000463317 POTEHQ6S545 545 aa9.81□□□□□ -0.84
VAMP7-204ENST00000463317 LRRIQ1Q96JM4 1722 aa9.81□□□□□ -0.84
VAMP7-204ENST00000463317 PLEKHH2Q8IVE3 1493 aa9.8□□□□□ -0.84
VAMP7-204ENST00000463317 MYCNP04198 464 aaPredicted RBP9.8□□□□□ -0.84
VAMP7-204ENST00000463317 APLP2Q06481 763 aa9.8□□□□□ -0.84
VAMP7-204ENST00000463317 ZNF784Q8NCA9 323 aaPredicted RBP9.8□□□□□ -0.84
VAMP7-204ENST00000463317 SLC26A8Q96RN1 970 aa9.8□□□□□ -0.84
VAMP7-204ENST00000463317 FMN1Q68DA7 1419 aa9.8□□□□□ -0.84
VAMP7-204ENST00000463317 PNPLA6Q8IY17 1366 aa9.79□□□□□ -0.84
VAMP7-204ENST00000463317 SAMD1Q6SPF0 538 aaPredicted RBP9.79□□□□□ -0.84
VAMP7-204ENST00000463317 BRINP3Q76B58 766 aa9.79□□□□□ -0.84
VAMP7-204ENST00000463317 FOXD4L1Q9NU39 408 aa9.79□□□□□ -0.84
VAMP7-204ENST00000463317 USP21Q9UK80 565 aa9.79□□□□□ -0.84
VAMP7-204ENST00000463317 RTEL1-TNFRSF6BF6WH68 1400 aa9.79□□□□□ -0.84
VAMP7-204ENST00000463317 NCOA3Q9Y6Q9 1424 aa9.79□□□□□ -0.84
VAMP7-204ENST00000463317 CAMSAP2Q08AD1 1489 aa9.79□□□□□ -0.84
VAMP7-204ENST00000463317 TMEM2Q9UHN6 1383 aa9.78□□□□□ -0.84
VAMP7-204ENST00000463317 GPATCH8Q9UKJ3 1502 aaKnown RBP9.78□□□□□ -0.84
VAMP7-204ENST00000463317 FNBP4Q8N3X1 1017 aaPredicted RBP9.77□□□□□ -0.85
VAMP7-204ENST00000463317 LRRC59Q96AG4 307 aaKnown RBP9.77□□□□□ -0.85
VAMP7-204ENST00000463317 MROH1Q8NDA8 1641 aa9.77□□□□□ -0.85
VAMP7-204ENST00000463317 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.76□□□□□ -0.85
VAMP7-204ENST00000463317 ADAMTS2O95450 1211 aa9.76□□□□□ -0.85
VAMP7-204ENST00000463317 CADPS2Q86UW7 1296 aa9.76□□□□□ -0.85
VAMP7-204ENST00000463317 UNC13BO14795 1591 aa9.75□□□□□ -0.85
VAMP7-204ENST00000463317 SF3B2Q13435 895 aaKnown RBP9.75□□□□□ -0.85
VAMP7-204ENST00000463317 ASXL1Q8IXJ9 1541 aa9.74□□□□□ -0.85
VAMP7-204ENST00000463317 CSRNP3Q8WYN3 585 aa9.74□□□□□ -0.85
VAMP7-204ENST00000463317 CHD2O14647 1828 aaKnown RBP9.74□□□□□ -0.85
VAMP7-204ENST00000463317 ARHGAP35Q9NRY4 1499 aa9.73□□□□□ -0.85
VAMP7-204ENST00000463317 MBD5Q9P267 1494 aa9.73□□□□□ -0.85
VAMP7-204ENST00000463317 C19orf44Q9H6X5 657 aa9.73□□□□□ -0.85
VAMP7-204ENST00000463317 ATF3P18847 181 aa9.72□□□□□ -0.85
VAMP7-204ENST00000463317 DSG3P32926 999 aa9.72□□□□□ -0.85
VAMP7-204ENST00000463317 R3HDM1Q15032 1099 aaKnown RBP9.72□□□□□ -0.85
VAMP7-204ENST00000463317 PIK3C2BO00750 1634 aa9.71□□□□□ -0.85
VAMP7-204ENST00000463317 SPHKAPQ2M3C7 1700 aa9.71□□□□□ -0.85
VAMP7-204ENST00000463317 ZBTB22O15209 634 aa9.71□□□□□ -0.86
VAMP7-204ENST00000463317 SLC34A2O95436 690 aa9.71□□□□□ -0.86
VAMP7-204ENST00000463317 GJD4Q96KN9 370 aaPredicted RBP9.71□□□□□ -0.86
VAMP7-204ENST00000463317 CFDP1Q9UEE9 299 aaPredicted RBP9.71□□□□□ -0.86
VAMP7-204ENST00000463317 CFAP65Q6ZU64 1925 aaKnown RBP9.71□□□□□ -0.86
VAMP7-204ENST00000463317 C14orf37Q86TY3 774 aa9.7□□□□□ -0.86
VAMP7-204ENST00000463317 PTCH1Q13635 1447 aa9.7□□□□□ -0.86
VAMP7-204ENST00000463317 BRWD3Q6RI45 1802 aa9.7□□□□□ -0.86
VAMP7-204ENST00000463317 BAG6P46379 1132 aa9.69□□□□□ -0.86
VAMP7-204ENST00000463317 EFCAB6Q5THR3 1501 aa9.69□□□□□ -0.86
VAMP7-204ENST00000463317 ZNF219Q9P2Y4 722 aaPredicted RBP9.69□□□□□ -0.86
VAMP7-204ENST00000463317 CCDC18Q5T9S5 1454 aa9.68□□□□□ -0.86
VAMP7-204ENST00000463317 ZNF644Q9H582 1327 aaPredicted RBP9.68□□□□□ -0.86
VAMP7-204ENST00000463317 DDX17Q92841 729 aaKnown RBP9.67□□□□□ -0.86
VAMP7-204ENST00000463317 CAMTA1Q9Y6Y1 1673 aa9.67□□□□□ -0.86
VAMP7-204ENST00000463317 GLI3P10071 1580 aa9.67□□□□□ -0.86
VAMP7-204ENST00000463317 DCCP43146 1447 aa9.66□□□□□ -0.86
VAMP7-204ENST00000463317 NINLQ9Y2I6 1382 aa9.66□□□□□ -0.86
VAMP7-204ENST00000463317 RALGAPBQ86X10 1494 aa9.66□□□□□ -0.86
VAMP7-204ENST00000463317 MST1RQ04912 1400 aa9.65□□□□□ -0.86
VAMP7-204ENST00000463317 ARHGAP31Q2M1Z3 1444 aa9.65□□□□□ -0.86
VAMP7-204ENST00000463317 EHMT2Q96KQ7 1210 aa9.65□□□□□ -0.86
VAMP7-204ENST00000463317 CEP152O94986 1710 aa9.65□□□□□ -0.87
VAMP7-204ENST00000463317 ABCB7O75027 752 aa9.64□□□□□ -0.87
VAMP7-204ENST00000463317 STAG3Q9UJ98 1225 aa9.64□□□□□ -0.87
VAMP7-204ENST00000463317 CCNB3Q8WWL7 1395 aa9.63□□□□□ -0.87
VAMP7-204ENST00000463317 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.63□□□□□ -0.87
VAMP7-204ENST00000463317 EN1Q05925 392 aaPredicted RBP9.63□□□□□ -0.87
VAMP7-204ENST00000463317 PLEKHG1Q9ULL1 1385 aa9.63□□□□□ -0.87
VAMP7-204ENST00000463317 UTRNP46939 3433 aa9.62□□□□□ -0.87
VAMP7-204ENST00000463317 IDI1Q13907 227 aa9.62□□□□□ -0.87
VAMP7-204ENST00000463317 BCANQ96GW7 911 aa9.62□□□□□ -0.87
VAMP7-204ENST00000463317 TBX22Q9Y458 520 aa9.62□□□□□ -0.87
VAMP7-204ENST00000463317 LAMC1P11047 1609 aa9.61□□□□□ -0.87
VAMP7-204ENST00000463317 COL22A1Q8NFW1 1626 aaPredicted RBP9.61□□□□□ -0.87
VAMP7-204ENST00000463317 PPP1R15AO75807 674 aaPredicted RBP9.61□□□□□ -0.87
VAMP7-204ENST00000463317 SEPT12Q8IYM1 358 aa9.61□□□□□ -0.87
VAMP7-204ENST00000463317 DISP2A7MBM2 1401 aa9.61□□□□□ -0.87
VAMP7-204ENST00000463317 CASKIN1Q8WXD9 1431 aa9.61□□□□□ -0.87
VAMP7-204ENST00000463317 MYOM2P54296 1465 aa9.6□□□□□ -0.87
VAMP7-204ENST00000463317 CCDC141Q6ZP82 1450 aa9.6□□□□□ -0.87
VAMP7-204ENST00000463317 KRT27Q7Z3Y8 459 aa9.6□□□□□ -0.87
VAMP7-204ENST00000463317 MARF1Q9Y4F3 1742 aaKnown RBP9.59□□□□□ -0.87
VAMP7-204ENST00000463317 SOS2Q07890 1332 aaPredicted RBP9.59□□□□□ -0.87
VAMP7-204ENST00000463317 ZFYVE9O95405 1425 aa9.59□□□□□ -0.87
VAMP7-204ENST00000463317 CHD4Q14839 1912 aa9.59□□□□□ -0.87
VAMP7-204ENST00000463317 ONECUT3O60422 494 aaPredicted RBP9.59□□□□□ -0.87
VAMP7-204ENST00000463317 GIGYF1O75420 1035 aaPredicted RBP9.59□□□□□ -0.87
VAMP7-204ENST00000463317 PCDH10Q9P2E7 1040 aa9.59□□□□□ -0.87
VAMP7-204ENST00000463317 PPP1R1BQ9UD71 204 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms