RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 E9PSI1 815 aa15.08■□□□□ 0
RBM39-223ENST00000463004 FRAT1Q92837 279 aaPredicted RBP15.08■□□□□ 0
RBM39-223ENST00000463004 NBPF1Q3BBV0 1214 aa15.07■□□□□ 0
RBM39-223ENST00000463004 TRAPPC8Q9Y2L5 1435 aa15.07■□□□□ 0
RBM39-223ENST00000463004 CASC1Q6TDU7 716 aa15.06■□□□□ 0
RBM39-223ENST00000463004 HSP90AA1P07900 732 aaKnown RBP15.06■□□□□ 0
RBM39-223ENST00000463004 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.06■□□□□ 0
RBM39-223ENST00000463004 MAPKBP1O60336 1514 aa15.06■□□□□ 0
RBM39-223ENST00000463004 ARHGEF12Q9NZN5 1544 aa15.06■□□□□ 0
RBM39-223ENST00000463004 DIAPH1O60610 1272 aaKnown RBP15.05■□□□□ 0
RBM39-223ENST00000463004 ANKLE2Q86XL3 938 aa15.05■□□□□ 0
RBM39-223ENST00000463004 BCL11AQ9H165 835 aa15.05■□□□□ -0
RBM39-223ENST00000463004 BECN1Q14457 450 aa15.04■□□□□ -0
RBM39-223ENST00000463004 TMEM132EQ6IEE7 984 aa15.04■□□□□ -0
RBM39-223ENST00000463004 PLEKHG5O94827 1062 aa15.04■□□□□ -0
RBM39-223ENST00000463004 SCAF11Q99590 1463 aaKnown RBP15.04■□□□□ -0
RBM39-223ENST00000463004 SOX12O15370 315 aa15.04■□□□□ -0
RBM39-223ENST00000463004 CSB-PGBD3P0DP91 1061 aa15.02■□□□□ -0
RBM39-223ENST00000463004 RUNDC1Q96C34 613 aa15.02■□□□□ -0
RBM39-223ENST00000463004 NINLQ9Y2I6 1382 aa15.02□□□□□ -0.01
RBM39-223ENST00000463004 RALGAPBQ86X10 1494 aa15.02□□□□□ -0.01
RBM39-223ENST00000463004 PRAM1Q96QH2 718 aa15.02□□□□□ -0.01
RBM39-223ENST00000463004 CHD1O14646 1710 aa15.01□□□□□ -0.01
RBM39-223ENST00000463004 EIF2AK4Q9P2K8 1649 aaKnown RBP15.01□□□□□ -0.01
RBM39-223ENST00000463004 STK31Q9BXU1 1019 aa15□□□□□ -0.01
RBM39-223ENST00000463004 ATP7AQ04656 1500 aa15□□□□□ -0.01
RBM39-223ENST00000463004 ADGBQ8N7X0 1667 aa15□□□□□ -0.01
RBM39-223ENST00000463004 PMFBP1Q8TBY8 1022 aa15□□□□□ -0.01
RBM39-223ENST00000463004 RWDD1Q9H446 243 aaPredicted RBP14.99□□□□□ -0.01
RBM39-223ENST00000463004 AAMPQ13685 434 aa14.99□□□□□ -0.01
RBM39-223ENST00000463004 C14orf93Q9H972 538 aaKnown RBP14.99□□□□□ -0.01
RBM39-223ENST00000463004 GPRASP1Q5JY77 1395 aa14.99□□□□□ -0.01
RBM39-223ENST00000463004 ATF3P18847 181 aa14.99□□□□□ -0.01
RBM39-223ENST00000463004 MYO5CQ9NQX4 1742 aa14.99□□□□□ -0.01
RBM39-223ENST00000463004 GCC2Q8IWJ2 1684 aa14.99□□□□□ -0.01
RBM39-223ENST00000463004 MAGI3Q5TCQ9 1506 aa14.98□□□□□ -0.01
RBM39-223ENST00000463004 PUS7Q96PZ0 661 aaKnown RBP14.98□□□□□ -0.01
RBM39-223ENST00000463004 PSME1Q06323 249 aa14.98□□□□□ -0.01
RBM39-223ENST00000463004 IDI1Q13907 227 aa14.98□□□□□ -0.01
RBM39-223ENST00000463004 CABP2Q9NPB3 220 aa14.98□□□□□ -0.01
RBM39-223ENST00000463004 ARAP3Q8WWN8 1544 aa14.97□□□□□ -0.01
RBM39-223ENST00000463004 A0A0G2JS52 829 aa14.97□□□□□ -0.01
RBM39-223ENST00000463004 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.96□□□□□ -0.01
RBM39-223ENST00000463004 TNRQ92752 1358 aa14.96□□□□□ -0.02
RBM39-223ENST00000463004 PPP2R1AP30153 589 aa14.96□□□□□ -0.02
RBM39-223ENST00000463004 CDK19Q9BWU1 502 aa14.95□□□□□ -0.02
RBM39-223ENST00000463004 SMC4Q9NTJ3 1288 aa14.95□□□□□ -0.02
RBM39-223ENST00000463004 PZPP20742 1482 aa14.95□□□□□ -0.02
RBM39-223ENST00000463004 CCDC146Q8IYE0 955 aa14.95□□□□□ -0.02
RBM39-223ENST00000463004 ATP10AO60312 1499 aa14.94□□□□□ -0.02
RBM39-223ENST00000463004 NSD2O96028 1365 aa14.94□□□□□ -0.02
RBM39-223ENST00000463004 MAST1Q9Y2H9 1570 aa14.94□□□□□ -0.02
RBM39-223ENST00000463004 NOS1P29475 1434 aa14.93□□□□□ -0.02
RBM39-223ENST00000463004 TCERG1O14776 1098 aaKnown RBP14.93□□□□□ -0.02
RBM39-223ENST00000463004 NUTM2FA1L443 756 aa14.93□□□□□ -0.02
RBM39-223ENST00000463004 PRAG1Q86YV5 1406 aa14.93□□□□□ -0.02
RBM39-223ENST00000463004 CCDC61Q9Y6R9 512 aa14.93□□□□□ -0.02
RBM39-223ENST00000463004 MBD5Q9P267 1494 aa14.92□□□□□ -0.02
RBM39-223ENST00000463004 SENP3-EIF4A1A0A087X0R7 540 aa14.92□□□□□ -0.02
RBM39-223ENST00000463004 APAF1O14727 1248 aa14.92□□□□□ -0.02
RBM39-223ENST00000463004 HMMRO75330 724 aa14.92□□□□□ -0.02
RBM39-223ENST00000463004 ADCY10Q96PN6 1610 aa14.92□□□□□ -0.02
RBM39-223ENST00000463004 UHRF1BP1Q6BDS2 1440 aa14.91□□□□□ -0.02
RBM39-223ENST00000463004 GNAI1P63096 354 aa14.91□□□□□ -0.02
RBM39-223ENST00000463004 B4GALNT3Q6L9W6 998 aa14.91□□□□□ -0.02
RBM39-223ENST00000463004 PREX2Q70Z35 1606 aa14.91□□□□□ -0.02
RBM39-223ENST00000463004 ADGRF5Q8IZF2 1346 aa14.91□□□□□ -0.02
RBM39-223ENST00000463004 MAGI2Q86UL8 1455 aa14.9□□□□□ -0.02
RBM39-223ENST00000463004 C1orf141Q5JVX7 400 aa14.9□□□□□ -0.02
RBM39-223ENST00000463004 PROSER2Q86WR7 435 aaPredicted RBP14.9□□□□□ -0.02
RBM39-223ENST00000463004 ANP32EQ9BTT0 268 aa14.9□□□□□ -0.02
RBM39-223ENST00000463004 MTHFSP49914 203 aa14.89□□□□□ -0.03
RBM39-223ENST00000463004 GGNBP2Q9H3C7 697 aa14.89□□□□□ -0.03
RBM39-223ENST00000463004 SLC12A5Q9H2X9 1139 aa14.89□□□□□ -0.03
RBM39-223ENST00000463004 ZKSCAN2Q63HK3 967 aa14.88□□□□□ -0.03
RBM39-223ENST00000463004 OS9Q13438 667 aaPredicted RBP14.88□□□□□ -0.03
RBM39-223ENST00000463004 CT47B1P0C2W7 299 aaPredicted RBP14.88□□□□□ -0.03
RBM39-223ENST00000463004 RRP1P56182 461 aaKnown RBP14.88□□□□□ -0.03
RBM39-223ENST00000463004 PNISRQ8TF01 805 aaKnown RBP14.87□□□□□ -0.03
RBM39-223ENST00000463004 ZCCHC11Q5TAX3 1644 aaKnown RBP14.87□□□□□ -0.03
RBM39-223ENST00000463004 ITPRIPQ8IWB1 547 aa14.87□□□□□ -0.03
RBM39-223ENST00000463004 MLH3Q9UHC1 1453 aa14.87□□□□□ -0.03
RBM39-223ENST00000463004 ABCC1P33527 1531 aa14.87□□□□□ -0.03
RBM39-223ENST00000463004 RIPK4P57078 832 aa14.87□□□□□ -0.03
RBM39-223ENST00000463004 NLRP6P59044 892 aa14.87□□□□□ -0.03
RBM39-223ENST00000463004 CABP1Q9NZU7 370 aa14.87□□□□□ -0.03
RBM39-223ENST00000463004 API5Q9BZZ5 524 aaKnown RBP14.86□□□□□ -0.03
RBM39-223ENST00000463004 GAS2L2Q8NHY3 880 aa14.86□□□□□ -0.03
RBM39-223ENST00000463004 KIF16BQ96L93 1317 aa14.86□□□□□ -0.03
RBM39-223ENST00000463004 TEFQ10587 303 aa14.85□□□□□ -0.03
RBM39-223ENST00000463004 FBXO31Q5XUX0 539 aaPredicted RBP14.85□□□□□ -0.03
RBM39-223ENST00000463004 RGS3P49796 1198 aa14.85□□□□□ -0.03
RBM39-223ENST00000463004 SMG6Q86US8 1419 aaKnown RBP14.84□□□□□ -0.03
RBM39-223ENST00000463004 ARXQ96QS3 562 aa14.84□□□□□ -0.03
RBM39-223ENST00000463004 NUDT16Q96DE0 195 aaKnown RBP14.84□□□□□ -0.03
RBM39-223ENST00000463004 NSD3Q9BZ95 1437 aa14.84□□□□□ -0.03
RBM39-223ENST00000463004 SAMD9LQ8IVG5 1584 aa14.84□□□□□ -0.03
RBM39-223ENST00000463004 LTV1Q96GA3 475 aaPredicted RBP14.84□□□□□ -0.03
RBM39-223ENST00000463004 ADAMTS8Q9UP79 889 aa14.84□□□□□ -0.03
RBM39-223ENST00000463004 CENPQQ7L2Z9 268 aaPredicted RBP14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms