RNA–Protein interactions for RNA: ENST00000462968.2

CD46-210, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 473 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-210ENST00000462968 GRXCR2A6NFK2 248 aa6.63□□□□□ -1.35
CD46-210ENST00000462968 GDF9O60383 454 aa6.63□□□□□ -1.35
CD46-210ENST00000462968 LIAT1Q6ZQX7 453 aa6.63□□□□□ -1.35
CD46-210ENST00000462968 ARIH1Q9Y4X5 557 aaPredicted RBP6.63□□□□□ -1.35
CD46-210ENST00000462968 BLOC1S3Q6QNY0 202 aa6.62□□□□□ -1.35
CD46-210ENST00000462968 ANKLE1Q8NAG6 615 aa6.62□□□□□ -1.35
CD46-210ENST00000462968 EYA1Q99502 592 aa6.62□□□□□ -1.35
CD46-210ENST00000462968 PRR14Q9BWN1 585 aa6.62□□□□□ -1.35
CD46-210ENST00000462968 NPDC1Q9NQX5 325 aaPredicted RBP6.62□□□□□ -1.35
CD46-210ENST00000462968 PCDHB3Q9Y5E6 796 aa6.62□□□□□ -1.35
CD46-210ENST00000462968 ZNF697Q5TEC3 545 aa6.61□□□□□ -1.35
CD46-210ENST00000462968 PADI6Q6TGC4 694 aa6.61□□□□□ -1.35
CD46-210ENST00000462968 AAASQ9NRG9 546 aa6.61□□□□□ -1.35
CD46-210ENST00000462968 FAM187AA6NFU0 413 aa6.6□□□□□ -1.35
CD46-210ENST00000462968 ST8SIA5O15466 376 aa6.6□□□□□ -1.35
CD46-210ENST00000462968 TLL1O43897 1013 aa6.6□□□□□ -1.35
CD46-210ENST00000462968 TNFRSF10AO00220 468 aa6.59□□□□□ -1.35
CD46-210ENST00000462968 PPEF1O14829 653 aaPredicted RBP6.59□□□□□ -1.35
CD46-210ENST00000462968 CECR2Q9BXF3 1484 aa6.59□□□□□ -1.36
CD46-210ENST00000462968 S1PR4O95977 384 aa6.58□□□□□ -1.36
CD46-210ENST00000462968 SLC4A3P48751 1232 aa6.58□□□□□ -1.36
CD46-210ENST00000462968 E2F4Q16254 413 aa6.56□□□□□ -1.36
CD46-210ENST00000462968 PLA2G2CQ5R387 149 aa6.56□□□□□ -1.36
CD46-210ENST00000462968 CRIPAKQ8N1N5 446 aa6.56□□□□□ -1.36
CD46-210ENST00000462968 ACTN4O43707 911 aaKnown RBP6.55□□□□□ -1.36
CD46-210ENST00000462968 PKD2L1Q9P0L9 805 aa6.55□□□□□ -1.36
CD46-210ENST00000462968 NACADO15069 1562 aa6.55□□□□□ -1.36
CD46-210ENST00000462968 STK17AQ9UEE5 414 aa6.54□□□□□ -1.36
CD46-210ENST00000462968 DACH1Q9UI36 760 aa6.54□□□□□ -1.36
CD46-210ENST00000462968 WIPF1O43516 503 aa6.53□□□□□ -1.36
CD46-210ENST00000462968 WFS1O76024 890 aa6.53□□□□□ -1.36
CD46-210ENST00000462968 ADH1BP00325 375 aa6.53□□□□□ -1.36
CD46-210ENST00000462968 DCAF8L2P0C7V8 631 aa6.53□□□□□ -1.36
CD46-210ENST00000462968 LMOD2Q6P5Q4 547 aa6.53□□□□□ -1.36
CD46-210ENST00000462968 AVPP01185 164 aa6.52□□□□□ -1.37
CD46-210ENST00000462968 NFX1Q12986 1120 aaKnown RBP6.52□□□□□ -1.37
CD46-210ENST00000462968 TMEM134Q9H6X4 195 aa6.52□□□□□ -1.37
CD46-210ENST00000462968 DNAJB2P25686 324 aa6.51□□□□□ -1.37
CD46-210ENST00000462968 KMT5BQ4FZB7 885 aa6.51□□□□□ -1.37
CD46-210ENST00000462968 SLC6A16Q9GZN6 736 aa6.51□□□□□ -1.37
CD46-210ENST00000462968 TOR4AQ9NXH8 423 aa6.5□□□□□ -1.37
CD46-210ENST00000462968 GMPR2Q9P2T1 348 aaKnown RBP6.5□□□□□ -1.37
CD46-210ENST00000462968 NR1I2O75469 434 aa6.49□□□□□ -1.37
CD46-210ENST00000462968 CFHP08603 1231 aa6.49□□□□□ -1.37
CD46-210ENST00000462968 CC2D2AQ9P2K1 1620 aa6.48□□□□□ -1.37
CD46-210ENST00000462968 SMCPP49901 116 aaPredicted RBP6.48□□□□□ -1.37
CD46-210ENST00000462968 FOXC1Q12948 553 aa6.48□□□□□ -1.37
CD46-210ENST00000462968 LCE2CQ5TA81 110 aa6.48□□□□□ -1.37
CD46-210ENST00000462968 ADGRG1Q9Y653 693 aa6.48□□□□□ -1.37
CD46-210ENST00000462968 BICRAQ9NZM4 1560 aa6.48□□□□□ -1.37
CD46-210ENST00000462968 C11orf95C9JLR9 678 aaPredicted RBP6.47□□□□□ -1.37
CD46-210ENST00000462968 SLC10A3P09131 477 aa6.47□□□□□ -1.37
CD46-210ENST00000462968 RPIAP49247 311 aa6.47□□□□□ -1.37
CD46-210ENST00000462968 INSM1Q01101 510 aaPredicted RBP6.47□□□□□ -1.37
CD46-210ENST00000462968 CTC1Q2NKJ3 1217 aa6.47□□□□□ -1.37
CD46-210ENST00000462968 RCCD1A6NED2 376 aa6.46□□□□□ -1.38
CD46-210ENST00000462968 AXIN1O15169 862 aa6.46□□□□□ -1.38
CD46-210ENST00000462968 SCUBE3Q8IX30 993 aa6.46□□□□□ -1.38
CD46-210ENST00000462968 RBM46Q8TBY0 533 aaKnown RBP6.46□□□□□ -1.38
CD46-210ENST00000462968 BBXQ8WY36 941 aaPredicted RBP6.46□□□□□ -1.38
CD46-210ENST00000462968 PTGDRQ13258 359 aa6.45□□□□□ -1.38
CD46-210ENST00000462968 LOC100996750A0A140TA64 210 aa6.44□□□□□ -1.38
CD46-210ENST00000462968 KRTAP4-6Q9BYQ5 205 aa6.44□□□□□ -1.38
CD46-210ENST00000462968 CUX2O14529 1486 aa6.43□□□□□ -1.38
CD46-210ENST00000462968 CYP4X1Q8N118 509 aa6.43□□□□□ -1.38
CD46-210ENST00000462968 SPSB2Q99619 263 aa6.43□□□□□ -1.38
CD46-210ENST00000462968 WDR70Q9NW82 654 aa6.43□□□□□ -1.38
CD46-210ENST00000462968 SHROOM4Q9ULL8 1493 aa6.41□□□□□ -1.38
CD46-210ENST00000462968 CD2BP2O95400 341 aaKnown RBP6.41□□□□□ -1.38
CD46-210ENST00000462968 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.4□□□□□ -1.38
CD46-210ENST00000462968 TERTO14746 1132 aaKnown RBP6.4□□□□□ -1.38
CD46-210ENST00000462968 MLLT3P42568 568 aaPredicted RBP6.4□□□□□ -1.38
CD46-210ENST00000462968 FAM161AQ3B820 660 aa6.4□□□□□ -1.38
CD46-210ENST00000462968 PUS10Q3MIT2 529 aaKnown RBP6.4□□□□□ -1.38
CD46-210ENST00000462968 FCF1Q9Y324 198 aaKnown RBP6.4□□□□□ -1.38
CD46-210ENST00000462968 SNRPBP14678 240 aaKnown RBP6.39□□□□□ -1.39
CD46-210ENST00000462968 SPRYD3Q8NCJ5 442 aa6.39□□□□□ -1.39
CD46-210ENST00000462968 THAP11Q96EK4 314 aa6.39□□□□□ -1.39
CD46-210ENST00000462968 ATP13A2Q9NQ11 1180 aa6.39□□□□□ -1.39
CD46-210ENST00000462968 TRIM47Q96LD4 638 aa6.38□□□□□ -1.39
CD46-210ENST00000462968 EIF4G1Q04637 1599 aaKnown RBP6.38□□□□□ -1.39
CD46-210ENST00000462968 UNC13AQ9UPW8 1703 aa6.38□□□□□ -1.39
CD46-210ENST00000462968 SMPD1P17405 629 aa6.37□□□□□ -1.39
CD46-210ENST00000462968 FAM160A2Q8N612 972 aaPredicted RBP6.37□□□□□ -1.39
CD46-210ENST00000462968 TTC24A2A3L6 582 aaPredicted RBP6.36□□□□□ -1.39
CD46-210ENST00000462968 MORN1Q5T089 497 aa6.36□□□□□ -1.39
CD46-210ENST00000462968 MYO15BQ96JP2 1530 aa6.35□□□□□ -1.39
CD46-210ENST00000462968 WNT7AO00755 349 aa6.35□□□□□ -1.39
CD46-210ENST00000462968 PXYLP1Q8TE99 480 aa6.35□□□□□ -1.39
CD46-210ENST00000462968 LORP23490 312 aaPredicted RBP6.34□□□□□ -1.39
CD46-210ENST00000462968 SENP2Q9HC62 589 aa6.34□□□□□ -1.39
CD46-210ENST00000462968 OATP04181 439 aa6.33□□□□□ -1.4
CD46-210ENST00000462968 RSPH4AQ5TD94 716 aa6.33□□□□□ -1.4
CD46-210ENST00000462968 SNIP1Q8TAD8 396 aaKnown RBP6.33□□□□□ -1.4
CD46-210ENST00000462968 PRDM9Q9NQV7 894 aa6.33□□□□□ -1.4
CD46-210ENST00000462968 FMNL1O95466 1100 aaPredicted RBP6.32□□□□□ -1.4
CD46-210ENST00000462968 ARHGEF1Q92888 912 aaKnown RBP6.32□□□□□ -1.4
CD46-210ENST00000462968 SLC27A5Q9Y2P5 690 aa6.32□□□□□ -1.4
CD46-210ENST00000462968 SALL2Q9Y467 1007 aaPredicted RBP6.32□□□□□ -1.4
CD46-210ENST00000462968 NUTM2FA1L443 756 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms