RNA–Protein interactions for RNA: ENST00000462731.1

SGCE-209, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-209ENST00000462731 HCSTQ9UBK5 93 aa9.06□□□□□ -0.96
SGCE-209ENST00000462731 SMARCA5O60264 1052 aaPredicted RBP9.05□□□□□ -0.96
SGCE-209ENST00000462731 PDIA6Q15084 440 aa9.05□□□□□ -0.96
SGCE-209ENST00000462731 GLMNQ92990 594 aa9.05□□□□□ -0.96
SGCE-209ENST00000462731 MRRFQ96E11 262 aaKnown RBP9.05□□□□□ -0.96
SGCE-209ENST00000462731 SOX12O15370 315 aa9.04□□□□□ -0.96
SGCE-209ENST00000462731 ARID4BQ4LE39 1312 aaPredicted RBP9.04□□□□□ -0.96
SGCE-209ENST00000462731 ERCC3P19447 782 aa9.03□□□□□ -0.96
SGCE-209ENST00000462731 LSM11P83369 360 aaKnown RBP eCLIP9.03□□□□□ -0.96
SGCE-209ENST00000462731 CC2D2BQ6DHV5 1058 aa9.03□□□□□ -0.96
SGCE-209ENST00000462731 GPR153Q6NV75 609 aa9.03□□□□□ -0.96
SGCE-209ENST00000462731 GNEQ9Y223 722 aaKnown RBP9.03□□□□□ -0.96
SGCE-209ENST00000462731 CADPSQ9ULU8 1353 aa9.02□□□□□ -0.97
SGCE-209ENST00000462731 HIC1Q14526 733 aa9.02□□□□□ -0.97
SGCE-209ENST00000462731 CERS3Q8IU89 383 aa9.02□□□□□ -0.97
SGCE-209ENST00000462731 TCF3P15923 654 aa9.01□□□□□ -0.97
SGCE-209ENST00000462731 TSR1Q2NL82 804 aaKnown RBP9.01□□□□□ -0.97
SGCE-209ENST00000462731 TAF7LQ5H9L4 462 aa9.01□□□□□ -0.97
SGCE-209ENST00000462731 TXNDC2Q86VQ3 553 aa9.01□□□□□ -0.97
SGCE-209ENST00000462731 BCCIPQ9P287 314 aaKnown RBP eCLIP9□□□□□ -0.97
SGCE-209ENST00000462731 NUTM2FA1L443 756 aa8.99□□□□□ -0.97
SGCE-209ENST00000462731 PSEN1P49768 467 aa8.99□□□□□ -0.97
SGCE-209ENST00000462731 PSMD1Q99460 953 aa8.99□□□□□ -0.97
SGCE-209ENST00000462731 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.99□□□□□ -0.97
SGCE-209ENST00000462731 VRTNQ9H8Y1 702 aa8.99□□□□□ -0.97
SGCE-209ENST00000462731 SNRKQ9NRH2 765 aa8.99□□□□□ -0.97
SGCE-209ENST00000462731 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.98□□□□□ -0.97
SGCE-209ENST00000462731 SRPK2P78362 688 aaKnown RBP8.98□□□□□ -0.97
SGCE-209ENST00000462731 PROCA1Q8NCQ7 364 aaPredicted RBP8.98□□□□□ -0.97
SGCE-209ENST00000462731 IRX2Q9BZI1 471 aaPredicted RBP8.98□□□□□ -0.97
SGCE-209ENST00000462731 PHF8Q9UPP1 1060 aa8.98□□□□□ -0.97
SGCE-209ENST00000462731 DPYSL4O14531 572 aa8.97□□□□□ -0.97
SGCE-209ENST00000462731 UBXN4Q92575 508 aa8.97□□□□□ -0.97
SGCE-209ENST00000462731 SOCS7O14512 581 aa8.96□□□□□ -0.98
SGCE-209ENST00000462731 FCHSD2O94868 740 aa8.96□□□□□ -0.98
SGCE-209ENST00000462731 EFCAB3Q8N7B9 438 aa8.96□□□□□ -0.98
SGCE-209ENST00000462731 ZNF592Q92610 1267 aa8.96□□□□□ -0.98
SGCE-209ENST00000462731 REPIN1Q9BWE0 567 aaKnown RBP8.96□□□□□ -0.98
SGCE-209ENST00000462731 GDPD2Q9HCC8 539 aa8.96□□□□□ -0.98
SGCE-209ENST00000462731 ZC3H4Q9UPT8 1303 aaKnown RBP8.96□□□□□ -0.98
SGCE-209ENST00000462731 POM121CA8CG34 1229 aa8.95□□□□□ -0.98
SGCE-209ENST00000462731 SIRT1Q96EB6 747 aa8.95□□□□□ -0.98
SGCE-209ENST00000462731 ATP1B4Q9UN42 357 aaPredicted RBP8.95□□□□□ -0.98
SGCE-209ENST00000462731 FECHP22830 423 aa8.94□□□□□ -0.98
SGCE-209ENST00000462731 TMEM259Q4ZIN3 620 aa8.94□□□□□ -0.98
SGCE-209ENST00000462731 CFAP70Q5T0N1 1121 aa8.94□□□□□ -0.98
SGCE-209ENST00000462731 B4GALNT3Q6L9W6 998 aa8.94□□□□□ -0.98
SGCE-209ENST00000462731 TMUB1Q9BVT8 246 aa8.94□□□□□ -0.98
SGCE-209ENST00000462731 ANKRD62A6NC57 917 aa8.93□□□□□ -0.98
SGCE-209ENST00000462731 ZNF16P17020 682 aaPredicted RBP8.93□□□□□ -0.98
SGCE-209ENST00000462731 CLCN1P35523 988 aa8.93□□□□□ -0.98
SGCE-209ENST00000462731 RFC5P40937 340 aa8.93□□□□□ -0.98
SGCE-209ENST00000462731 ZC3H6P61129 1189 aaKnown RBP8.93□□□□□ -0.98
SGCE-209ENST00000462731 PPP1R15BQ5SWA1 713 aa8.93□□□□□ -0.98
SGCE-209ENST00000462731 TICAM2Q86XR7 235 aa8.93□□□□□ -0.98
SGCE-209ENST00000462731 PRM3Q9NNZ6 103 aa8.93□□□□□ -0.98
SGCE-209ENST00000462731 CARNS1A5YM72 827 aa8.92□□□□□ -0.98
SGCE-209ENST00000462731 SF3A1Q15459 793 aaKnown RBP8.92□□□□□ -0.98
SGCE-209ENST00000462731 DNAJC14Q6Y2X3 702 aaPredicted RBP8.92□□□□□ -0.98
SGCE-209ENST00000462731 TMEM88BA6NKF7 163 aa8.91□□□□□ -0.98
SGCE-209ENST00000462731 RGS20O76081 388 aa8.91□□□□□ -0.98
SGCE-209ENST00000462731 CLSTN1O94985 981 aa8.91□□□□□ -0.98
SGCE-209ENST00000462731 RFX1P22670 979 aa8.91□□□□□ -0.98
SGCE-209ENST00000462731 MTMR14Q8NCE2 650 aa8.91□□□□□ -0.98
SGCE-209ENST00000462731 HIRIP3Q9BW71 556 aaPredicted RBP8.91□□□□□ -0.98
SGCE-209ENST00000462731 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.91□□□□□ -0.98
SGCE-209ENST00000462731 ABL2P42684 1182 aa8.9□□□□□ -0.98
SGCE-209ENST00000462731 ARSIQ5FYB1 569 aa8.9□□□□□ -0.98
SGCE-209ENST00000462731 EMILIN3Q9NT22 766 aa8.9□□□□□ -0.98
SGCE-209ENST00000462731 POLR3EQ9NVU0 708 aa8.9□□□□□ -0.98
SGCE-209ENST00000462731 KDM4AO75164 1064 aa8.89□□□□□ -0.99
SGCE-209ENST00000462731 GPCPD1Q9NPB8 672 aa8.89□□□□□ -0.99
SGCE-209ENST00000462731 VAMP1P23763 118 aa8.88□□□□□ -0.99
SGCE-209ENST00000462731 TMEM92Q6UXU6 159 aa8.88□□□□□ -0.99
SGCE-209ENST00000462731 CABP2Q9NPB3 220 aa8.88□□□□□ -0.99
SGCE-209ENST00000462731 ATG7O95352 703 aa8.87□□□□□ -0.99
SGCE-209ENST00000462731 CLK2P49760 499 aaKnown RBP8.87□□□□□ -0.99
SGCE-209ENST00000462731 MYSM1Q5VVJ2 828 aa8.87□□□□□ -0.99
SGCE-209ENST00000462731 NOL8Q76FK4 1167 aaKnown RBP8.87□□□□□ -0.99
SGCE-209ENST00000462731 CCER1Q8TC90 406 aaPredicted RBP8.87□□□□□ -0.99
SGCE-209ENST00000462731 BEGAINQ9BUH8 593 aa8.87□□□□□ -0.99
SGCE-209ENST00000462731 BCL2L13Q9BXK5 485 aa8.87□□□□□ -0.99
SGCE-209ENST00000462731 SSTR3P32745 418 aaPredicted RBP8.86□□□□□ -0.99
SGCE-209ENST00000462731 PBX2P40425 430 aa8.86□□□□□ -0.99
SGCE-209ENST00000462731 PPP1R12CQ9BZL4 782 aa8.86□□□□□ -0.99
SGCE-209ENST00000462731 GRXCR2A6NFK2 248 aa8.85□□□□□ -0.99
SGCE-209ENST00000462731 HDGFL1Q5TGJ6 251 aa8.85□□□□□ -0.99
SGCE-209ENST00000462731 PPP2R2DQ66LE6 453 aa8.85□□□□□ -0.99
SGCE-209ENST00000462731 BRPF3Q9ULD4 1205 aa8.85□□□□□ -0.99
SGCE-209ENST00000462731 PLEKHD1A6NEE1 506 aa8.84□□□□□ -0.99
SGCE-209ENST00000462731 ADAMTS19Q8TE59 1207 aa8.84□□□□□ -0.99
SGCE-209ENST00000462731 MS4A4AQ96JQ5 239 aa8.84□□□□□ -0.99
SGCE-209ENST00000462731 GPHNQ9NQX3 736 aaPredicted RBP8.84□□□□□ -0.99
SGCE-209ENST00000462731 OSBPP22059 807 aa8.83□□□□□ -1
SGCE-209ENST00000462731 POTEEQ6S8J3 1075 aa8.83□□□□□ -1
SGCE-209ENST00000462731 KHSRPQ92945 711 aaKnown RBP eCLIP8.83□□□□□ -1
SGCE-209ENST00000462731 TBC1D2BQ9UPU7 963 aa8.83□□□□□ -1
SGCE-209ENST00000462731 NAALADL2Q58DX5 795 aa8.82□□□□□ -1
SGCE-209ENST00000462731 GIPC2Q8TF65 315 aa8.82□□□□□ -1
SGCE-209ENST00000462731 AXIN2Q9Y2T1 843 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms