RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 SLIT1O75093 1534 aa13.27□□□□□ -0.29
DDX39B-216ENST00000462421 KDM5AP29375 1690 aaKnown RBP13.25□□□□□ -0.29
DDX39B-216ENST00000462421 SYNMO15061 1565 aa13.25□□□□□ -0.29
DDX39B-216ENST00000462421 NEURL4Q96JN8 1562 aa13.24□□□□□ -0.29
DDX39B-216ENST00000462421 ARHGAP23Q9P227 1491 aa13.24□□□□□ -0.29
DDX39B-216ENST00000462421 RIMS2Q9UQ26 1411 aa13.24□□□□□ -0.29
DDX39B-216ENST00000462421 LTKP29376 864 aa13.23□□□□□ -0.29
DDX39B-216ENST00000462421 C14orf37Q86TY3 774 aa13.23□□□□□ -0.29
DDX39B-216ENST00000462421 LTBP4Q8N2S1 1624 aa13.23□□□□□ -0.29
DDX39B-216ENST00000462421 PIP4K2BP78356 416 aa13.21□□□□□ -0.29
DDX39B-216ENST00000462421 SLC26A8Q96RN1 970 aa13.21□□□□□ -0.29
DDX39B-216ENST00000462421 E9PCH4 1651 aa13.21□□□□□ -0.3
DDX39B-216ENST00000462421 PLEKHG1Q9ULL1 1385 aa13.2□□□□□ -0.3
DDX39B-216ENST00000462421 PROSER2Q86WR7 435 aaPredicted RBP13.2□□□□□ -0.3
DDX39B-216ENST00000462421 SETD5Q9C0A6 1442 aa13.19□□□□□ -0.3
DDX39B-216ENST00000462421 KCNA6P17658 529 aa13.18□□□□□ -0.3
DDX39B-216ENST00000462421 NUTM2DQ5VT03 806 aaPredicted RBP13.18□□□□□ -0.3
DDX39B-216ENST00000462421 CCDC144AA2RUR9 1427 aa13.17□□□□□ -0.3
DDX39B-216ENST00000462421 SPHKAPQ2M3C7 1700 aa13.16□□□□□ -0.3
DDX39B-216ENST00000462421 VGFO15240 615 aaPredicted RBP13.16□□□□□ -0.3
DDX39B-216ENST00000462421 TRPM2O94759 1503 aa13.16□□□□□ -0.3
DDX39B-216ENST00000462421 TMEM131LA2VDJ0 1609 aa13.15□□□□□ -0.3
DDX39B-216ENST00000462421 MPHOSPH9Q99550 1183 aa13.15□□□□□ -0.3
DDX39B-216ENST00000462421 TBX22Q9Y458 520 aa13.15□□□□□ -0.3
DDX39B-216ENST00000462421 MSH6P52701 1360 aa13.15□□□□□ -0.3
DDX39B-216ENST00000462421 DIP2AQ14689 1571 aa13.14□□□□□ -0.31
DDX39B-216ENST00000462421 RPGRIP1LQ68CZ1 1315 aa13.13□□□□□ -0.31
DDX39B-216ENST00000462421 ZFYVE9O95405 1425 aa13.13□□□□□ -0.31
DDX39B-216ENST00000462421 NKTRP30414 1462 aaKnown RBP13.13□□□□□ -0.31
DDX39B-216ENST00000462421 PIK3R4Q99570 1358 aa13.13□□□□□ -0.31
DDX39B-216ENST00000462421 LRRC7Q96NW7 1537 aa13.12□□□□□ -0.31
DDX39B-216ENST00000462421 TMEM94Q12767 1356 aa13.11□□□□□ -0.31
DDX39B-216ENST00000462421 RAB3GAP2Q9H2M9 1393 aa13.11□□□□□ -0.31
DDX39B-216ENST00000462421 SOCS7O14512 581 aa13.11□□□□□ -0.31
DDX39B-216ENST00000462421 ATF3P18847 181 aa13.1□□□□□ -0.31
DDX39B-216ENST00000462421 KIF1BO60333 1816 aa13.09□□□□□ -0.31
DDX39B-216ENST00000462421 RGL3Q3MIN7 710 aa13.09□□□□□ -0.31
DDX39B-216ENST00000462421 CLTCL1P53675 1640 aa13.08□□□□□ -0.32
DDX39B-216ENST00000462421 CADPS2Q86UW7 1296 aa13.07□□□□□ -0.32
DDX39B-216ENST00000462421 AMOTL2Q9Y2J4 779 aa13.07□□□□□ -0.32
DDX39B-216ENST00000462421 ANKRD30BQ9BXX2 1392 aa13.06□□□□□ -0.32
DDX39B-216ENST00000462421 DISP3Q9P2K9 1392 aa13.06□□□□□ -0.32
DDX39B-216ENST00000462421 NCOA3Q9Y6Q9 1424 aa13.05□□□□□ -0.32
DDX39B-216ENST00000462421 MYO5BQ9ULV0 1848 aa13.05□□□□□ -0.32
DDX39B-216ENST00000462421 HRCP23327 699 aa13.05□□□□□ -0.32
DDX39B-216ENST00000462421 NWD1Q149M9 1564 aa13.04□□□□□ -0.32
DDX39B-216ENST00000462421 HSPA1LP34931 641 aa13.04□□□□□ -0.32
DDX39B-216ENST00000462421 RBM33Q96EV2 1170 aaKnown RBP13.04□□□□□ -0.32
DDX39B-216ENST00000462421 SETBP1Q9Y6X0 1596 aa13.03□□□□□ -0.32
DDX39B-216ENST00000462421 C19orf44Q9H6X5 657 aa13.03□□□□□ -0.32
DDX39B-216ENST00000462421 ADAMTS13Q76LX8 1427 aa13.03□□□□□ -0.32
DDX39B-216ENST00000462421 NEXMIFQ5QGS0 1516 aa13.02□□□□□ -0.33
DDX39B-216ENST00000462421 SLAIN2Q9P270 581 aa13.01□□□□□ -0.33
DDX39B-216ENST00000462421 ILDR2Q71H61 639 aa12.99□□□□□ -0.33
DDX39B-216ENST00000462421 STRCP1A6NGW2 1772 aa12.99□□□□□ -0.33
DDX39B-216ENST00000462421 FAM135BQ49AJ0 1406 aa12.98□□□□□ -0.33
DDX39B-216ENST00000462421 STAC3Q96MF2 364 aa12.98□□□□□ -0.33
DDX39B-216ENST00000462421 METP08581 1390 aa12.97□□□□□ -0.33
DDX39B-216ENST00000462421 STK26Q9P289 416 aa12.97□□□□□ -0.33
DDX39B-216ENST00000462421 CHD2O14647 1828 aaKnown RBP12.97□□□□□ -0.33
DDX39B-216ENST00000462421 DCCP43146 1447 aa12.96□□□□□ -0.33
DDX39B-216ENST00000462421 KDM2AQ9Y2K7 1162 aa12.95□□□□□ -0.34
DDX39B-216ENST00000462421 PTCH1Q13635 1447 aa12.95□□□□□ -0.34
DDX39B-216ENST00000462421 DHX57Q6P158 1386 aaKnown RBP12.94□□□□□ -0.34
DDX39B-216ENST00000462421 ADGRF5Q8IZF2 1346 aa12.94□□□□□ -0.34
DDX39B-216ENST00000462421 MEX3CQ5U5Q3 659 aaKnown RBP12.94□□□□□ -0.34
DDX39B-216ENST00000462421 DCAF11Q8TEB1 546 aa12.94□□□□□ -0.34
DDX39B-216ENST00000462421 ALKQ9UM73 1620 aa12.94□□□□□ -0.34
DDX39B-216ENST00000462421 SPATA31E1Q6ZUB1 1445 aa12.94□□□□□ -0.34
DDX39B-216ENST00000462421 POGKQ9P215 609 aa12.93□□□□□ -0.34
DDX39B-216ENST00000462421 PTPRUQ92729 1446 aa12.93□□□□□ -0.34
DDX39B-216ENST00000462421 ADGRL3Q9HAR2 1447 aa12.93□□□□□ -0.34
DDX39B-216ENST00000462421 PPLO60437 1756 aa12.92□□□□□ -0.34
DDX39B-216ENST00000462421 MYOM2P54296 1465 aa12.91□□□□□ -0.34
DDX39B-216ENST00000462421 TRIM26Q12899 539 aaPredicted RBP12.91□□□□□ -0.34
DDX39B-216ENST00000462421 ROBO1Q9Y6N7 1651 aa12.91□□□□□ -0.34
DDX39B-216ENST00000462421 NRXN3Q9Y4C0 1643 aa12.91□□□□□ -0.34
DDX39B-216ENST00000462421 XRN1Q8IZH2 1706 aaKnown RBP12.91□□□□□ -0.34
DDX39B-216ENST00000462421 PIK3C2GO75747 1445 aa12.9□□□□□ -0.34
DDX39B-216ENST00000462421 LRPPRCP42704 1394 aaKnown RBP12.9□□□□□ -0.34
DDX39B-216ENST00000462421 JCADQ9P266 1359 aa12.9□□□□□ -0.34
DDX39B-216ENST00000462421 TMEM132EQ6IEE7 984 aa12.89□□□□□ -0.35
DDX39B-216ENST00000462421 LAMC1P11047 1609 aa12.88□□□□□ -0.35
DDX39B-216ENST00000462421 C14orf93Q9H972 538 aaKnown RBP12.88□□□□□ -0.35
DDX39B-216ENST00000462421 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.88□□□□□ -0.35
DDX39B-216ENST00000462421 ROBO2Q9HCK4 1378 aa12.87□□□□□ -0.35
DDX39B-216ENST00000462421 LRRC59Q96AG4 307 aaKnown RBP12.87□□□□□ -0.35
DDX39B-216ENST00000462421 XIRP1Q702N8 1843 aaKnown RBP12.87□□□□□ -0.35
DDX39B-216ENST00000462421 YTHDC2Q9H6S0 1430 aaKnown RBP12.87□□□□□ -0.35
DDX39B-216ENST00000462421 MED1Q15648 1581 aaPredicted RBP12.86□□□□□ -0.35
DDX39B-216ENST00000462421 EIF3AQ14152 1382 aaKnown RBP12.86□□□□□ -0.35
DDX39B-216ENST00000462421 ABCC11Q96J66 1382 aa12.86□□□□□ -0.35
DDX39B-216ENST00000462421 PHLPP1O60346 1717 aa12.86□□□□□ -0.35
DDX39B-216ENST00000462421 ESCO1Q5FWF5 840 aa12.86□□□□□ -0.35
DDX39B-216ENST00000462421 CFAP70Q5T0N1 1121 aa12.86□□□□□ -0.35
DDX39B-216ENST00000462421 BRINP3Q76B58 766 aa12.86□□□□□ -0.35
DDX39B-216ENST00000462421 SPATA31A6Q5VVP1 1343 aa12.86□□□□□ -0.35
DDX39B-216ENST00000462421 NEUROD1Q13562 356 aa12.84□□□□□ -0.35
DDX39B-216ENST00000462421 SAFB2Q14151 953 aaKnown RBP eCLIP12.84□□□□□ -0.35
DDX39B-216ENST00000462421 SIRT1Q96EB6 747 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms