RNA–Protein interactions for RNA: ENST00000462394.1

LDLRAP1-202, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 2

Gene LDLRAP1, Length 369 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-202ENST00000462394 ZNF644Q9H582 1327 aaPredicted RBP6.9□□□□□ -1.3
LDLRAP1-202ENST00000462394 CCNB3Q8WWL7 1395 aa6.9□□□□□ -1.31
LDLRAP1-202ENST00000462394 NWD1Q149M9 1564 aa6.9□□□□□ -1.31
LDLRAP1-202ENST00000462394 NUTM2BA6NNL0 878 aaPredicted RBP6.89□□□□□ -1.31
LDLRAP1-202ENST00000462394 NUTM2EB1AL46 878 aaPredicted RBP6.89□□□□□ -1.31
LDLRAP1-202ENST00000462394 NUTM2DQ5VT03 806 aaPredicted RBP6.89□□□□□ -1.31
LDLRAP1-202ENST00000462394 NUTM2AQ8IVF1 878 aaPredicted RBP6.89□□□□□ -1.31
LDLRAP1-202ENST00000462394 RBM33Q96EV2 1170 aaKnown RBP6.89□□□□□ -1.31
LDLRAP1-202ENST00000462394 NGLY1Q96IV0 654 aa6.89□□□□□ -1.31
LDLRAP1-202ENST00000462394 DIP2AQ14689 1571 aa6.88□□□□□ -1.31
LDLRAP1-202ENST00000462394 ARHGAP31Q2M1Z3 1444 aa6.88□□□□□ -1.31
LDLRAP1-202ENST00000462394 CAPN15O75808 1086 aa6.88□□□□□ -1.31
LDLRAP1-202ENST00000462394 SETD5Q9C0A6 1442 aa6.87□□□□□ -1.31
LDLRAP1-202ENST00000462394 CADPS2Q86UW7 1296 aa6.87□□□□□ -1.31
LDLRAP1-202ENST00000462394 SLC26A8Q96RN1 970 aa6.87□□□□□ -1.31
LDLRAP1-202ENST00000462394 CCDC141Q6ZP82 1450 aa6.86□□□□□ -1.31
LDLRAP1-202ENST00000462394 FYCO1Q9BQS8 1478 aa6.86□□□□□ -1.31
LDLRAP1-202ENST00000462394 UBTFP17480 764 aaKnown RBP6.86□□□□□ -1.31
LDLRAP1-202ENST00000462394 LRP5O75197 1615 aa6.86□□□□□ -1.31
LDLRAP1-202ENST00000462394 KDM5AP29375 1690 aaKnown RBP6.85□□□□□ -1.31
LDLRAP1-202ENST00000462394 IFFO2Q5TF58 517 aa6.85□□□□□ -1.31
LDLRAP1-202ENST00000462394 BRINP3Q76B58 766 aa6.85□□□□□ -1.31
LDLRAP1-202ENST00000462394 SLC4A1APQ9BWU0 796 aaKnown RBP6.85□□□□□ -1.31
LDLRAP1-202ENST00000462394 C19orf44Q9H6X5 657 aa6.85□□□□□ -1.31
LDLRAP1-202ENST00000462394 LRRC59Q96AG4 307 aaKnown RBP6.84□□□□□ -1.31
LDLRAP1-202ENST00000462394 EFCAB6Q5THR3 1501 aa6.83□□□□□ -1.32
LDLRAP1-202ENST00000462394 C8orf37Q96NL8 207 aa6.83□□□□□ -1.32
LDLRAP1-202ENST00000462394 MROH1Q8NDA8 1641 aa6.83□□□□□ -1.32
LDLRAP1-202ENST00000462394 TSPY4P0CV99 314 aa6.82□□□□□ -1.32
LDLRAP1-202ENST00000462394 TSPY10P0CW01 314 aa6.82□□□□□ -1.32
LDLRAP1-202ENST00000462394 ATF3P18847 181 aa6.82□□□□□ -1.32
LDLRAP1-202ENST00000462394 IDI1Q13907 227 aa6.82□□□□□ -1.32
LDLRAP1-202ENST00000462394 FNBP4Q8N3X1 1017 aaPredicted RBP6.82□□□□□ -1.32
LDLRAP1-202ENST00000462394 TRPC5Q9UL62 973 aaPredicted RBP6.82□□□□□ -1.32
LDLRAP1-202ENST00000462394 TBX22Q9Y458 520 aa6.82□□□□□ -1.32
LDLRAP1-202ENST00000462394 MAST1Q9Y2H9 1570 aa6.82□□□□□ -1.32
LDLRAP1-202ENST00000462394 MTUS2Q5JR59 1369 aa6.82□□□□□ -1.32
LDLRAP1-202ENST00000462394 PNPLA6Q8IY17 1366 aa6.82□□□□□ -1.32
LDLRAP1-202ENST00000462394 EP400Q96L91 3159 aa6.81□□□□□ -1.32
LDLRAP1-202ENST00000462394 PIK3C2BO00750 1634 aa6.81□□□□□ -1.32
LDLRAP1-202ENST00000462394 NHSL1Q5SYE7 1610 aa6.81□□□□□ -1.32
LDLRAP1-202ENST00000462394 EIF2AK4Q9P2K8 1649 aaKnown RBP6.81□□□□□ -1.32
LDLRAP1-202ENST00000462394 DSG3P32926 999 aa6.81□□□□□ -1.32
LDLRAP1-202ENST00000462394 STAG3Q9UJ98 1225 aa6.81□□□□□ -1.32
LDLRAP1-202ENST00000462394 DCCP43146 1447 aa6.81□□□□□ -1.32
LDLRAP1-202ENST00000462394 BLMP54132 1417 aaPredicted RBP6.81□□□□□ -1.32
LDLRAP1-202ENST00000462394 CEP162Q5TB80 1403 aa6.81□□□□□ -1.32
LDLRAP1-202ENST00000462394 PLEKHG1Q9ULL1 1385 aa6.81□□□□□ -1.32
LDLRAP1-202ENST00000462394 ATRNO75882 1429 aa6.8□□□□□ -1.32
LDLRAP1-202ENST00000462394 ARHGEF5Q12774 1597 aa6.8□□□□□ -1.32
LDLRAP1-202ENST00000462394 USP21Q9UK80 565 aa6.8□□□□□ -1.32
LDLRAP1-202ENST00000462394 PIK3R4Q99570 1358 aa6.8□□□□□ -1.32
LDLRAP1-202ENST00000462394 ABCB7O75027 752 aa6.79□□□□□ -1.32
LDLRAP1-202ENST00000462394 HRCP23327 699 aa6.79□□□□□ -1.32
LDLRAP1-202ENST00000462394 ASXL1Q8IXJ9 1541 aa6.79□□□□□ -1.32
LDLRAP1-202ENST00000462394 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.79□□□□□ -1.32
LDLRAP1-202ENST00000462394 CHD2O14647 1828 aaKnown RBP6.78□□□□□ -1.32
LDLRAP1-202ENST00000462394 ZFYVE9O95405 1425 aa6.78□□□□□ -1.32
LDLRAP1-202ENST00000462394 PTCH1Q13635 1447 aa6.78□□□□□ -1.32
LDLRAP1-202ENST00000462394 YY1P25490 414 aa6.78□□□□□ -1.32
LDLRAP1-202ENST00000462394 HDGFP51858 240 aaKnown RBP6.78□□□□□ -1.32
LDLRAP1-202ENST00000462394 C14orf37Q86TY3 774 aa6.78□□□□□ -1.32
LDLRAP1-202ENST00000462394 SLC52A1Q9NWF4 448 aa6.78□□□□□ -1.32
LDLRAP1-202ENST00000462394 BCL9LQ86UU0 1499 aa6.78□□□□□ -1.32
LDLRAP1-202ENST00000462394 NOS1P29475 1434 aa6.77□□□□□ -1.33
LDLRAP1-202ENST00000462394 MST1RQ04912 1400 aa6.76□□□□□ -1.33
LDLRAP1-202ENST00000462394 ADGRB3O60242 1522 aa6.76□□□□□ -1.33
LDLRAP1-202ENST00000462394 EHBP1L1Q8N3D4 1523 aa6.76□□□□□ -1.33
LDLRAP1-202ENST00000462394 ZBTB22O15209 634 aa6.76□□□□□ -1.33
LDLRAP1-202ENST00000462394 ADAMTS2O95450 1211 aa6.76□□□□□ -1.33
LDLRAP1-202ENST00000462394 DEFB132Q7Z7B7 95 aa6.76□□□□□ -1.33
LDLRAP1-202ENST00000462394 BCANQ96GW7 911 aa6.76□□□□□ -1.33
LDLRAP1-202ENST00000462394 GJD4Q96KN9 370 aaPredicted RBP6.76□□□□□ -1.33
LDLRAP1-202ENST00000462394 CEP152O94986 1710 aa6.76□□□□□ -1.33
LDLRAP1-202ENST00000462394 LMTK2Q8IWU2 1503 aa6.76□□□□□ -1.33
LDLRAP1-202ENST00000462394 DUOX2Q9NRD8 1548 aa6.76□□□□□ -1.33
LDLRAP1-202ENST00000462394 ADAMTS13Q76LX8 1427 aa6.76□□□□□ -1.33
LDLRAP1-202ENST00000462394 PPP1R15AO75807 674 aaPredicted RBP6.75□□□□□ -1.33
LDLRAP1-202ENST00000462394 SOS2Q07890 1332 aaPredicted RBP6.75□□□□□ -1.33
LDLRAP1-202ENST00000462394 UNC13BO14795 1591 aa6.74□□□□□ -1.33
LDLRAP1-202ENST00000462394 SF3B2Q13435 895 aaKnown RBP6.74□□□□□ -1.33
LDLRAP1-202ENST00000462394 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.74□□□□□ -1.33
LDLRAP1-202ENST00000462394 ERBINQ96RT1 1412 aa6.74□□□□□ -1.33
LDLRAP1-202ENST00000462394 LAMC1P11047 1609 aa6.73□□□□□ -1.33
LDLRAP1-202ENST00000462394 KANK1Q14678 1352 aa6.73□□□□□ -1.33
LDLRAP1-202ENST00000462394 EHMT2Q96KQ7 1210 aa6.73□□□□□ -1.33
LDLRAP1-202ENST00000462394 AMOTL2Q9Y2J4 779 aa6.73□□□□□ -1.33
LDLRAP1-202ENST00000462394 RIMS2Q9UQ26 1411 aa6.73□□□□□ -1.33
LDLRAP1-202ENST00000462394 PSDA5PKW4 1024 aaPredicted RBP6.72□□□□□ -1.33
LDLRAP1-202ENST00000462394 ONECUT3O60422 494 aaPredicted RBP6.72□□□□□ -1.33
LDLRAP1-202ENST00000462394 DDX17Q92841 729 aaKnown RBP6.72□□□□□ -1.33
LDLRAP1-202ENST00000462394 ATF5Q9Y2D1 282 aaPredicted RBP6.72□□□□□ -1.33
LDLRAP1-202ENST00000462394 PTPRUQ92729 1446 aa6.72□□□□□ -1.33
LDLRAP1-202ENST00000462394 TRPM2O94759 1503 aa6.71□□□□□ -1.33
LDLRAP1-202ENST00000462394 SPHKAPQ2M3C7 1700 aa6.71□□□□□ -1.34
LDLRAP1-202ENST00000462394 MYCNP04198 464 aaPredicted RBP6.71□□□□□ -1.34
LDLRAP1-202ENST00000462394 FOXD4L1Q9NU39 408 aa6.71□□□□□ -1.34
LDLRAP1-202ENST00000462394 MYOM2P54296 1465 aa6.71□□□□□ -1.34
LDLRAP1-202ENST00000462394 KIF15Q9NS87 1388 aa6.7□□□□□ -1.34
LDLRAP1-202ENST00000462394 CFAP65Q6ZU64 1925 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms