RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 UBAP1LF5GYI3 381 aa8.54□□□□□ -1.04
CLK1-207ENST00000461981 MYT1LQ9UL68 1186 aa8.54□□□□□ -1.04
CLK1-207ENST00000461981 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.54□□□□□ -1.04
CLK1-207ENST00000461981 SETD1AO15047 1707 aaKnown RBP8.53□□□□□ -1.04
CLK1-207ENST00000461981 ZNF335Q9H4Z2 1342 aaPredicted RBP8.53□□□□□ -1.04
CLK1-207ENST00000461981 ROCK1Q13464 1354 aa8.53□□□□□ -1.04
CLK1-207ENST00000461981 TMEM2Q9UHN6 1383 aa8.53□□□□□ -1.04
CLK1-207ENST00000461981 PLEKHG1Q9ULL1 1385 aa8.52□□□□□ -1.04
CLK1-207ENST00000461981 DAPK1P53355 1430 aa8.52□□□□□ -1.05
CLK1-207ENST00000461981 PKNOX2Q96KN3 472 aa8.52□□□□□ -1.05
CLK1-207ENST00000461981 WASHC2CQ9Y4E1 1318 aa8.52□□□□□ -1.05
CLK1-207ENST00000461981 ANKRD30AQ9BXX3 1397 aa8.52□□□□□ -1.05
CLK1-207ENST00000461981 TRPM2O94759 1503 aa8.51□□□□□ -1.05
CLK1-207ENST00000461981 TMEM131LA2VDJ0 1609 aa8.51□□□□□ -1.05
CLK1-207ENST00000461981 HDGFP51858 240 aaKnown RBP8.51□□□□□ -1.05
CLK1-207ENST00000461981 SLC52A1Q9NWF4 448 aa8.51□□□□□ -1.05
CLK1-207ENST00000461981 ABCC5O15440 1437 aa8.51□□□□□ -1.05
CLK1-207ENST00000461981 ZFYVE9O95405 1425 aa8.51□□□□□ -1.05
CLK1-207ENST00000461981 SETBP1Q9Y6X0 1596 aa8.51□□□□□ -1.05
CLK1-207ENST00000461981 PODXL2Q9NZ53 605 aa8.51□□□□□ -1.05
CLK1-207ENST00000461981 XRN1Q8IZH2 1706 aaKnown RBP8.5□□□□□ -1.05
CLK1-207ENST00000461981 ILDR2Q71H61 639 aa8.5□□□□□ -1.05
CLK1-207ENST00000461981 KIF3BO15066 747 aa8.49□□□□□ -1.05
CLK1-207ENST00000461981 KCNA6P17658 529 aa8.49□□□□□ -1.05
CLK1-207ENST00000461981 COL16A1Q07092 1604 aaPredicted RBP8.49□□□□□ -1.05
CLK1-207ENST00000461981 NHSL1Q5SYE7 1610 aa8.49□□□□□ -1.05
CLK1-207ENST00000461981 KIF15Q9NS87 1388 aa8.49□□□□□ -1.05
CLK1-207ENST00000461981 ATP1B4Q9UN42 357 aaPredicted RBP8.49□□□□□ -1.05
CLK1-207ENST00000461981 EID1Q9Y6B2 187 aa8.49□□□□□ -1.05
CLK1-207ENST00000461981 ROBO1Q9Y6N7 1651 aa8.48□□□□□ -1.05
CLK1-207ENST00000461981 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.48□□□□□ -1.05
CLK1-207ENST00000461981 PHLPP1O60346 1717 aa8.48□□□□□ -1.05
CLK1-207ENST00000461981 GGT6Q6P531 493 aa8.47□□□□□ -1.05
CLK1-207ENST00000461981 SPATA31A6Q5VVP1 1343 aa8.46□□□□□ -1.05
CLK1-207ENST00000461981 DEKP35659 375 aaKnown RBP8.46□□□□□ -1.05
CLK1-207ENST00000461981 ZNF777Q9ULD5 760 aaPredicted RBP8.46□□□□□ -1.06
CLK1-207ENST00000461981 COL22A1Q8NFW1 1626 aaPredicted RBP8.46□□□□□ -1.06
CLK1-207ENST00000461981 JCADQ9P266 1359 aa8.45□□□□□ -1.06
CLK1-207ENST00000461981 TBX22Q9Y458 520 aa8.45□□□□□ -1.06
CLK1-207ENST00000461981 HSPA1LP34931 641 aa8.44□□□□□ -1.06
CLK1-207ENST00000461981 CCER1Q8TC90 406 aaPredicted RBP8.44□□□□□ -1.06
CLK1-207ENST00000461981 MIER1Q8N108 512 aa8.43□□□□□ -1.06
CLK1-207ENST00000461981 SPHKAPQ2M3C7 1700 aa8.43□□□□□ -1.06
CLK1-207ENST00000461981 E9PCH4 1651 aa8.43□□□□□ -1.06
CLK1-207ENST00000461981 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.42□□□□□ -1.06
CLK1-207ENST00000461981 MSH6P52701 1360 aa8.42□□□□□ -1.06
CLK1-207ENST00000461981 SETD5Q9C0A6 1442 aa8.42□□□□□ -1.06
CLK1-207ENST00000461981 RTN4Q9NQC3 1192 aaKnown RBP8.42□□□□□ -1.06
CLK1-207ENST00000461981 KNDC1Q76NI1 1749 aa8.42□□□□□ -1.06
CLK1-207ENST00000461981 ZNF644Q9H582 1327 aaPredicted RBP8.42□□□□□ -1.06
CLK1-207ENST00000461981 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.41□□□□□ -1.06
CLK1-207ENST00000461981 BCANQ96GW7 911 aa8.41□□□□□ -1.06
CLK1-207ENST00000461981 RBM19Q9Y4C8 960 aaKnown RBP8.41□□□□□ -1.06
CLK1-207ENST00000461981 MSH5O43196 834 aa8.41□□□□□ -1.06
CLK1-207ENST00000461981 RIMS2Q9UQ26 1411 aa8.4□□□□□ -1.06
CLK1-207ENST00000461981 PTCH1Q13635 1447 aa8.4□□□□□ -1.07
CLK1-207ENST00000461981 FOXD1Q16676 465 aa8.4□□□□□ -1.07
CLK1-207ENST00000461981 NRXN3Q9Y4C0 1643 aa8.4□□□□□ -1.07
CLK1-207ENST00000461981 FBXO31Q5XUX0 539 aaPredicted RBP8.39□□□□□ -1.07
CLK1-207ENST00000461981 RANGAP1P46060 587 aaPredicted RBP8.39□□□□□ -1.07
CLK1-207ENST00000461981 MYO5BQ9ULV0 1848 aa8.39□□□□□ -1.07
CLK1-207ENST00000461981 ANKRD50Q9ULJ7 1429 aa8.39□□□□□ -1.07
CLK1-207ENST00000461981 TXNDC2Q86VQ3 553 aa8.38□□□□□ -1.07
CLK1-207ENST00000461981 ADAMTS13Q76LX8 1427 aa8.38□□□□□ -1.07
CLK1-207ENST00000461981 MARF1Q9Y4F3 1742 aaKnown RBP8.38□□□□□ -1.07
CLK1-207ENST00000461981 TMEM94Q12767 1356 aa8.37□□□□□ -1.07
CLK1-207ENST00000461981 KIF1AQ12756 1690 aa8.37□□□□□ -1.07
CLK1-207ENST00000461981 KIF1BO60333 1816 aa8.37□□□□□ -1.07
CLK1-207ENST00000461981 PHF23Q9BUL5 403 aaPredicted RBP8.37□□□□□ -1.07
CLK1-207ENST00000461981 ERICH6BQ5W0A0 696 aa8.36□□□□□ -1.07
CLK1-207ENST00000461981 CDC42BPGQ6DT37 1551 aa8.36□□□□□ -1.07
CLK1-207ENST00000461981 ZNF772Q68DY9 489 aaPredicted RBP8.36□□□□□ -1.07
CLK1-207ENST00000461981 PLPPR3Q6T4P5 718 aa8.35□□□□□ -1.07
CLK1-207ENST00000461981 RPGRIP1LQ68CZ1 1315 aa8.35□□□□□ -1.07
CLK1-207ENST00000461981 ASXL1Q8IXJ9 1541 aa8.35□□□□□ -1.07
CLK1-207ENST00000461981 LTKP29376 864 aa8.35□□□□□ -1.07
CLK1-207ENST00000461981 CADPS2Q86UW7 1296 aa8.35□□□□□ -1.07
CLK1-207ENST00000461981 ADGRL3Q9HAR2 1447 aa8.35□□□□□ -1.07
CLK1-207ENST00000461981 NEXMIFQ5QGS0 1516 aa8.34□□□□□ -1.07
CLK1-207ENST00000461981 CLSPNQ9HAW4 1339 aa8.34□□□□□ -1.07
CLK1-207ENST00000461981 IL27Q8NEV9 243 aa8.34□□□□□ -1.07
CLK1-207ENST00000461981 ZNF316A6NFI3 1004 aaPredicted RBP8.34□□□□□ -1.07
CLK1-207ENST00000461981 IFT172Q9UG01 1749 aa8.33□□□□□ -1.08
CLK1-207ENST00000461981 NALCNQ8IZF0 1738 aa8.33□□□□□ -1.08
CLK1-207ENST00000461981 HFM1A2PYH4 1435 aa8.33□□□□□ -1.08
CLK1-207ENST00000461981 PPLO60437 1756 aa8.32□□□□□ -1.08
CLK1-207ENST00000461981 TECPR2O15040 1411 aa8.32□□□□□ -1.08
CLK1-207ENST00000461981 IDI1Q13907 227 aa8.32□□□□□ -1.08
CLK1-207ENST00000461981 MST1RQ04912 1400 aa8.31□□□□□ -1.08
CLK1-207ENST00000461981 LRP5O75197 1615 aa8.31□□□□□ -1.08
CLK1-207ENST00000461981 C19orf44Q9H6X5 657 aa8.31□□□□□ -1.08
CLK1-207ENST00000461981 NWD2Q9ULI1 1742 aa8.31□□□□□ -1.08
CLK1-207ENST00000461981 PROSER2Q86WR7 435 aaPredicted RBP8.3□□□□□ -1.08
CLK1-207ENST00000461981 SIRT1Q96EB6 747 aa8.3□□□□□ -1.08
CLK1-207ENST00000461981 RGS17Q9UGC6 210 aaPredicted RBP8.3□□□□□ -1.08
CLK1-207ENST00000461981 CCDC125Q86Z20 511 aa8.29□□□□□ -1.08
CLK1-207ENST00000461981 SLAIN2Q9P270 581 aa8.29□□□□□ -1.08
CLK1-207ENST00000461981 CLTCL1P53675 1640 aa8.29□□□□□ -1.08
CLK1-207ENST00000461981 LRP6O75581 1613 aa8.28□□□□□ -1.08
CLK1-207ENST00000461981 ADGRB2O60241 1585 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms