RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 ZNF326Q5BKZ1 582 aaKnown RBP13.31□□□□□ -0.28
LDB1-203ENST00000461873 PROSER2Q86WR7 435 aaPredicted RBP13.31□□□□□ -0.28
LDB1-203ENST00000461873 KCNA6P17658 529 aa13.3□□□□□ -0.28
LDB1-203ENST00000461873 IQGAP3Q86VI3 1631 aa13.3□□□□□ -0.28
LDB1-203ENST00000461873 C14orf37Q86TY3 774 aa13.29□□□□□ -0.28
LDB1-203ENST00000461873 RRBP1Q9P2E9 1410 aaKnown RBP13.29□□□□□ -0.28
LDB1-203ENST00000461873 RIMS2Q9UQ26 1411 aa13.29□□□□□ -0.28
LDB1-203ENST00000461873 LRRC7Q96NW7 1537 aa13.29□□□□□ -0.28
LDB1-203ENST00000461873 HSPA1LP34931 641 aa13.28□□□□□ -0.28
LDB1-203ENST00000461873 E9PCH4 1651 aa13.28□□□□□ -0.28
LDB1-203ENST00000461873 NUTM2DQ5VT03 806 aaPredicted RBP13.27□□□□□ -0.29
LDB1-203ENST00000461873 PLEKHG1Q9ULL1 1385 aa13.26□□□□□ -0.29
LDB1-203ENST00000461873 MYO5BQ9ULV0 1848 aa13.26□□□□□ -0.29
LDB1-203ENST00000461873 STRCP1A6NGW2 1772 aa13.25□□□□□ -0.29
LDB1-203ENST00000461873 MSH6P52701 1360 aa13.24□□□□□ -0.29
LDB1-203ENST00000461873 SLC4A1APQ9BWU0 796 aaKnown RBP13.24□□□□□ -0.29
LDB1-203ENST00000461873 TMEM131LA2VDJ0 1609 aa13.24□□□□□ -0.29
LDB1-203ENST00000461873 TMEM94Q12767 1356 aa13.23□□□□□ -0.29
LDB1-203ENST00000461873 TBX22Q9Y458 520 aa13.23□□□□□ -0.29
LDB1-203ENST00000461873 SPHKAPQ2M3C7 1700 aa13.22□□□□□ -0.29
LDB1-203ENST00000461873 ACIN1Q9UKV3 1341 aaKnown RBP13.21□□□□□ -0.29
LDB1-203ENST00000461873 RBM33Q96EV2 1170 aaKnown RBP13.21□□□□□ -0.29
LDB1-203ENST00000461873 NKTRP30414 1462 aaKnown RBP13.21□□□□□ -0.3
LDB1-203ENST00000461873 ZFYVE9O95405 1425 aa13.21□□□□□ -0.3
LDB1-203ENST00000461873 NAIPQ13075 1403 aa13.21□□□□□ -0.3
LDB1-203ENST00000461873 KIF1BO60333 1816 aa13.19□□□□□ -0.3
LDB1-203ENST00000461873 ATF3P18847 181 aa13.19□□□□□ -0.3
LDB1-203ENST00000461873 HFM1A2PYH4 1435 aa13.19□□□□□ -0.3
LDB1-203ENST00000461873 DIP2AQ14689 1571 aa13.18□□□□□ -0.3
LDB1-203ENST00000461873 PIK3R4Q99570 1358 aa13.18□□□□□ -0.3
LDB1-203ENST00000461873 VGFO15240 615 aaPredicted RBP13.17□□□□□ -0.3
LDB1-203ENST00000461873 AMOTL2Q9Y2J4 779 aa13.17□□□□□ -0.3
LDB1-203ENST00000461873 CHD2O14647 1828 aaKnown RBP13.17□□□□□ -0.3
LDB1-203ENST00000461873 TRPM2O94759 1503 aa13.17□□□□□ -0.3
LDB1-203ENST00000461873 CADPS2Q86UW7 1296 aa13.16□□□□□ -0.3
LDB1-203ENST00000461873 SLAIN2Q9P270 581 aa13.16□□□□□ -0.3
LDB1-203ENST00000461873 XIRP1Q702N8 1843 aaKnown RBP13.16□□□□□ -0.3
LDB1-203ENST00000461873 PIAS4Q8N2W9 510 aaPredicted RBP13.15□□□□□ -0.3
LDB1-203ENST00000461873 NWD1Q149M9 1564 aa13.15□□□□□ -0.3
LDB1-203ENST00000461873 FAM135BQ49AJ0 1406 aa13.14□□□□□ -0.31
LDB1-203ENST00000461873 NCOA3Q9Y6Q9 1424 aa13.14□□□□□ -0.31
LDB1-203ENST00000461873 ILDR2Q71H61 639 aa13.14□□□□□ -0.31
LDB1-203ENST00000461873 C19orf44Q9H6X5 657 aa13.14□□□□□ -0.31
LDB1-203ENST00000461873 SOCS7O14512 581 aa13.13□□□□□ -0.31
LDB1-203ENST00000461873 RPGRIP1LQ68CZ1 1315 aa13.13□□□□□ -0.31
LDB1-203ENST00000461873 MED1Q15648 1581 aaPredicted RBP13.12□□□□□ -0.31
LDB1-203ENST00000461873 CLTCL1P53675 1640 aa13.11□□□□□ -0.31
LDB1-203ENST00000461873 MPHOSPH9Q99550 1183 aa13.11□□□□□ -0.31
LDB1-203ENST00000461873 CCDC144AA2RUR9 1427 aa13.11□□□□□ -0.31
LDB1-203ENST00000461873 ADAMTS13Q76LX8 1427 aa13.11□□□□□ -0.31
LDB1-203ENST00000461873 ROBO1Q9Y6N7 1651 aa13.11□□□□□ -0.31
LDB1-203ENST00000461873 ALKQ9UM73 1620 aa13.1□□□□□ -0.31
LDB1-203ENST00000461873 RGL3Q3MIN7 710 aa13.09□□□□□ -0.31
LDB1-203ENST00000461873 MEX3CQ5U5Q3 659 aaKnown RBP13.08□□□□□ -0.32
LDB1-203ENST00000461873 SETBP1Q9Y6X0 1596 aa13.07□□□□□ -0.32
LDB1-203ENST00000461873 PHLPP1O60346 1717 aa13.07□□□□□ -0.32
LDB1-203ENST00000461873 SETD5Q9C0A6 1442 aa13.06□□□□□ -0.32
LDB1-203ENST00000461873 NEXMIFQ5QGS0 1516 aa13.06□□□□□ -0.32
LDB1-203ENST00000461873 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.05□□□□□ -0.32
LDB1-203ENST00000461873 METP08581 1390 aa13.05□□□□□ -0.32
LDB1-203ENST00000461873 JCADQ9P266 1359 aa13.05□□□□□ -0.32
LDB1-203ENST00000461873 PTPRUQ92729 1446 aa13.03□□□□□ -0.32
LDB1-203ENST00000461873 ANKRD30BQ9BXX2 1392 aa13.02□□□□□ -0.33
LDB1-203ENST00000461873 DCCP43146 1447 aa13.02□□□□□ -0.33
LDB1-203ENST00000461873 NRXN3Q9Y4C0 1643 aa13.02□□□□□ -0.33
LDB1-203ENST00000461873 PPLO60437 1756 aa13□□□□□ -0.33
LDB1-203ENST00000461873 SPATA31A6Q5VVP1 1343 aa13□□□□□ -0.33
LDB1-203ENST00000461873 STK26Q9P289 416 aa13□□□□□ -0.33
LDB1-203ENST00000461873 XRN1Q8IZH2 1706 aaKnown RBP12.99□□□□□ -0.33
LDB1-203ENST00000461873 BRINP3Q76B58 766 aa12.99□□□□□ -0.33
LDB1-203ENST00000461873 LRRC59Q96AG4 307 aaKnown RBP12.99□□□□□ -0.33
LDB1-203ENST00000461873 ADGRL3Q9HAR2 1447 aa12.98□□□□□ -0.33
LDB1-203ENST00000461873 RAB3GAP2Q9H2M9 1393 aa12.98□□□□□ -0.33
LDB1-203ENST00000461873 NUTM2BA6NNL0 878 aaPredicted RBP12.98□□□□□ -0.33
LDB1-203ENST00000461873 NUTM2EB1AL46 878 aaPredicted RBP12.98□□□□□ -0.33
LDB1-203ENST00000461873 MSH5O43196 834 aa12.98□□□□□ -0.33
LDB1-203ENST00000461873 NUTM2AQ8IVF1 878 aaPredicted RBP12.98□□□□□ -0.33
LDB1-203ENST00000461873 PTCH1Q13635 1447 aa12.96□□□□□ -0.33
LDB1-203ENST00000461873 ADGRF5Q8IZF2 1346 aa12.96□□□□□ -0.33
LDB1-203ENST00000461873 ZNF772Q68DY9 489 aaPredicted RBP12.96□□□□□ -0.33
LDB1-203ENST00000461873 MST1RQ04912 1400 aa12.95□□□□□ -0.34
LDB1-203ENST00000461873 AHDC1Q5TGY3 1603 aaPredicted RBP12.95□□□□□ -0.34
LDB1-203ENST00000461873 ASXL1Q8IXJ9 1541 aa12.94□□□□□ -0.34
LDB1-203ENST00000461873 ESCO1Q5FWF5 840 aa12.94□□□□□ -0.34
LDB1-203ENST00000461873 COL16A1Q07092 1604 aaPredicted RBP12.94□□□□□ -0.34
LDB1-203ENST00000461873 DHX57Q6P158 1386 aaKnown RBP12.94□□□□□ -0.34
LDB1-203ENST00000461873 ROBO2Q9HCK4 1378 aa12.94□□□□□ -0.34
LDB1-203ENST00000461873 TMEM132EQ6IEE7 984 aa12.93□□□□□ -0.34
LDB1-203ENST00000461873 NALCNQ8IZF0 1738 aa12.93□□□□□ -0.34
LDB1-203ENST00000461873 HRCP23327 699 aa12.92□□□□□ -0.34
LDB1-203ENST00000461873 SPATA31E1Q6ZUB1 1445 aa12.92□□□□□ -0.34
LDB1-203ENST00000461873 POGKQ9P215 609 aa12.92□□□□□ -0.34
LDB1-203ENST00000461873 KDM2AQ9Y2K7 1162 aa12.92□□□□□ -0.34
LDB1-203ENST00000461873 LRPPRCP42704 1394 aaKnown RBP12.92□□□□□ -0.34
LDB1-203ENST00000461873 SHPRHQ149N8 1683 aa12.91□□□□□ -0.34
LDB1-203ENST00000461873 C1orf167Q5SNV9 1468 aa12.91□□□□□ -0.34
LDB1-203ENST00000461873 SETD1AO15047 1707 aaKnown RBP12.91□□□□□ -0.34
LDB1-203ENST00000461873 NUTM2FA1L443 756 aa12.9□□□□□ -0.34
LDB1-203ENST00000461873 WAPLQ7Z5K2 1190 aa12.9□□□□□ -0.34
LDB1-203ENST00000461873 DCAF11Q8TEB1 546 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms