RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 MLLT3P42568 568 aaPredicted RBP6.51□□□□□ -1.37
HDAC6-212ENST00000461608 LMOD2Q6P5Q4 547 aa6.51□□□□□ -1.37
HDAC6-212ENST00000461608 SLF2Q8IX21 1173 aa6.51□□□□□ -1.37
HDAC6-212ENST00000461608 SLC19A1P41440 591 aa6.5□□□□□ -1.37
HDAC6-212ENST00000461608 COPS2P61201 443 aa6.5□□□□□ -1.37
HDAC6-212ENST00000461608 NUDT18Q6ZVK8 323 aa6.5□□□□□ -1.37
HDAC6-212ENST00000461608 TTC13Q8NBP0 860 aa6.5□□□□□ -1.37
HDAC6-212ENST00000461608 ZNF516Q92618 1163 aa6.5□□□□□ -1.37
HDAC6-212ENST00000461608 FAM187AA6NFU0 413 aa6.49□□□□□ -1.37
HDAC6-212ENST00000461608 PADI6Q6TGC4 694 aa6.49□□□□□ -1.37
HDAC6-212ENST00000461608 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.49□□□□□ -1.37
HDAC6-212ENST00000461608 TESPA1A2RU30 521 aaPredicted RBP6.47□□□□□ -1.37
HDAC6-212ENST00000461608 APLP1P51693 650 aa6.47□□□□□ -1.37
HDAC6-212ENST00000461608 MYT1Q01538 1121 aa6.47□□□□□ -1.37
HDAC6-212ENST00000461608 TREML4Q6UXN2 200 aa6.47□□□□□ -1.37
HDAC6-212ENST00000461608 ZPR1O75312 459 aa6.46□□□□□ -1.38
HDAC6-212ENST00000461608 INSM1Q01101 510 aaPredicted RBP6.46□□□□□ -1.38
HDAC6-212ENST00000461608 ZNF598Q86UK7 904 aaKnown RBP6.46□□□□□ -1.38
HDAC6-212ENST00000461608 PRR20EP86478 221 aa6.45□□□□□ -1.38
HDAC6-212ENST00000461608 PRR20CP86479 221 aa6.45□□□□□ -1.38
HDAC6-212ENST00000461608 PRR20DP86480 221 aa6.45□□□□□ -1.38
HDAC6-212ENST00000461608 PRR20BP86481 221 aa6.45□□□□□ -1.38
HDAC6-212ENST00000461608 PRR20AP86496 221 aa6.45□□□□□ -1.38
HDAC6-212ENST00000461608 SWT1Q5T5J6 900 aaKnown RBP6.45□□□□□ -1.38
HDAC6-212ENST00000461608 NKX2-3Q8TAU0 364 aa6.45□□□□□ -1.38
HDAC6-212ENST00000461608 RBM27Q9P2N5 1060 aaKnown RBP6.45□□□□□ -1.38
HDAC6-212ENST00000461608 STK17AQ9UEE5 414 aa6.45□□□□□ -1.38
HDAC6-212ENST00000461608 PCDHB3Q9Y5E6 796 aa6.45□□□□□ -1.38
HDAC6-212ENST00000461608 SEMA3EO15041 775 aa6.43□□□□□ -1.38
HDAC6-212ENST00000461608 ZNF697Q5TEC3 545 aa6.43□□□□□ -1.38
HDAC6-212ENST00000461608 SPRYD7Q5W111 196 aa6.43□□□□□ -1.38
HDAC6-212ENST00000461608 EYA1Q99502 592 aa6.43□□□□□ -1.38
HDAC6-212ENST00000461608 FAM181BA6NEQ2 426 aa6.42□□□□□ -1.38
HDAC6-212ENST00000461608 FAM161AQ3B820 660 aa6.42□□□□□ -1.38
HDAC6-212ENST00000461608 WFS1O76024 890 aa6.41□□□□□ -1.38
HDAC6-212ENST00000461608 ANKLE1Q8NAG6 615 aa6.41□□□□□ -1.38
HDAC6-212ENST00000461608 RNF223E7ERA6 249 aa6.4□□□□□ -1.38
HDAC6-212ENST00000461608 TNFRSF10AO00220 468 aa6.4□□□□□ -1.38
HDAC6-212ENST00000461608 PTGDRQ13258 359 aa6.4□□□□□ -1.38
HDAC6-212ENST00000461608 KMT5BQ4FZB7 885 aa6.39□□□□□ -1.39
HDAC6-212ENST00000461608 ZC3H15Q8WU90 426 aaKnown RBP6.39□□□□□ -1.39
HDAC6-212ENST00000461608 TMEM132AQ24JP5 1023 aa6.38□□□□□ -1.39
HDAC6-212ENST00000461608 POTECB2RU33 542 aa6.37□□□□□ -1.39
HDAC6-212ENST00000461608 C11orf95C9JLR9 678 aaPredicted RBP6.37□□□□□ -1.39
HDAC6-212ENST00000461608 TRIM67Q6ZTA4 783 aa6.37□□□□□ -1.39
HDAC6-212ENST00000461608 ERICH6Q7L0X2 663 aa6.37□□□□□ -1.39
HDAC6-212ENST00000461608 ADGRG1Q9Y653 693 aa6.37□□□□□ -1.39
HDAC6-212ENST00000461608 GPIHBP1Q8IV16 184 aa6.36□□□□□ -1.39
HDAC6-212ENST00000461608 EMID1Q96A84 441 aaPredicted RBP6.36□□□□□ -1.39
HDAC6-212ENST00000461608 AAASQ9NRG9 546 aa6.36□□□□□ -1.39
HDAC6-212ENST00000461608 DAXXQ9UER7 740 aaPredicted RBP6.36□□□□□ -1.39
HDAC6-212ENST00000461608 AXIN1O15169 862 aa6.35□□□□□ -1.39
HDAC6-212ENST00000461608 TLL1O43897 1013 aa6.35□□□□□ -1.39
HDAC6-212ENST00000461608 ZMYND10O75800 440 aa6.35□□□□□ -1.39
HDAC6-212ENST00000461608 BLOC1S3Q6QNY0 202 aa6.35□□□□□ -1.39
HDAC6-212ENST00000461608 NUTM2FA1L443 756 aa6.34□□□□□ -1.39
HDAC6-212ENST00000461608 ST8SIA5O15466 376 aa6.34□□□□□ -1.39
HDAC6-212ENST00000461608 NR1I2O75469 434 aa6.34□□□□□ -1.39
HDAC6-212ENST00000461608 FOXC1Q12948 553 aa6.34□□□□□ -1.39
HDAC6-212ENST00000461608 TMEM134Q9H6X4 195 aa6.34□□□□□ -1.39
HDAC6-212ENST00000461608 RCCD1A6NED2 376 aa6.33□□□□□ -1.4
HDAC6-212ENST00000461608 S1PR4O95977 384 aa6.33□□□□□ -1.4
HDAC6-212ENST00000461608 FECHP22830 423 aa6.33□□□□□ -1.4
HDAC6-212ENST00000461608 CTC1Q2NKJ3 1217 aa6.33□□□□□ -1.4
HDAC6-212ENST00000461608 CYP4X1Q8N118 509 aa6.33□□□□□ -1.4
HDAC6-212ENST00000461608 PPEF1O14829 653 aaPredicted RBP6.32□□□□□ -1.4
HDAC6-212ENST00000461608 GDF9O60383 454 aa6.32□□□□□ -1.4
HDAC6-212ENST00000461608 SLC10A3P09131 477 aa6.32□□□□□ -1.4
HDAC6-212ENST00000461608 DNAJB2P25686 324 aa6.32□□□□□ -1.4
HDAC6-212ENST00000461608 RBM26Q5T8P6 1007 aaKnown RBP6.32□□□□□ -1.4
HDAC6-212ENST00000461608 RSPH4AQ5TD94 716 aa6.32□□□□□ -1.4
HDAC6-212ENST00000461608 SLC6A16Q9GZN6 736 aa6.32□□□□□ -1.4
HDAC6-212ENST00000461608 GPR37O15354 613 aa6.31□□□□□ -1.4
HDAC6-212ENST00000461608 CD2BP2O95400 341 aaKnown RBP6.31□□□□□ -1.4
HDAC6-212ENST00000461608 ADH1BP00325 375 aa6.31□□□□□ -1.4
HDAC6-212ENST00000461608 LIAT1Q6ZQX7 453 aa6.31□□□□□ -1.4
HDAC6-212ENST00000461608 BARGINQ6ZT62 677 aa6.31□□□□□ -1.4
HDAC6-212ENST00000461608 CRIPAKQ8N1N5 446 aa6.3□□□□□ -1.4
HDAC6-212ENST00000461608 RBM46Q8TBY0 533 aaKnown RBP6.3□□□□□ -1.4
HDAC6-212ENST00000461608 SLC24A3Q9HC58 644 aa6.3□□□□□ -1.4
HDAC6-212ENST00000461608 WIPF1O43516 503 aa6.29□□□□□ -1.4
HDAC6-212ENST00000461608 CFHP08603 1231 aa6.29□□□□□ -1.4
HDAC6-212ENST00000461608 BRPF1P55201 1214 aaPredicted RBP6.29□□□□□ -1.4
HDAC6-212ENST00000461608 PXYLP1Q8TE99 480 aa6.29□□□□□ -1.4
HDAC6-212ENST00000461608 SLC16A10Q8TF71 515 aa6.29□□□□□ -1.4
HDAC6-212ENST00000461608 NLRP7Q8WX94 980 aa6.29□□□□□ -1.4
HDAC6-212ENST00000461608 SENP2Q9HC62 589 aa6.29□□□□□ -1.4
HDAC6-212ENST00000461608 TTC24A2A3L6 582 aaPredicted RBP6.28□□□□□ -1.4
HDAC6-212ENST00000461608 ZBTB24O43167 697 aaPredicted RBP6.28□□□□□ -1.4
HDAC6-212ENST00000461608 ACTN4O43707 911 aaKnown RBP6.28□□□□□ -1.4
HDAC6-212ENST00000461608 FCHSD2O94868 740 aa6.28□□□□□ -1.4
HDAC6-212ENST00000461608 AK7Q96M32 723 aa6.28□□□□□ -1.4
HDAC6-212ENST00000461608 GMPR2Q9P2T1 348 aaKnown RBP6.28□□□□□ -1.4
HDAC6-212ENST00000461608 NEUROD2Q15784 382 aa6.27□□□□□ -1.41
HDAC6-212ENST00000461608 LCE2AQ5TA79 106 aaPredicted RBP6.27□□□□□ -1.41
HDAC6-212ENST00000461608 METTL3Q86U44 580 aaKnown RBP6.27□□□□□ -1.41
HDAC6-212ENST00000461608 PLA2G2CQ5R387 149 aa6.26□□□□□ -1.41
HDAC6-212ENST00000461608 PHOX2BQ99453 314 aa6.26□□□□□ -1.41
HDAC6-212ENST00000461608 GTF3C3Q9Y5Q9 886 aa6.26□□□□□ -1.41
HDAC6-212ENST00000461608 RPIAP49247 311 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms