RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 EMILIN3Q9NT22 766 aa8.85□□□□□ -0.99
BRCA1-206ENST00000461574 ZCCHC11Q5TAX3 1644 aaKnown RBP8.84□□□□□ -0.99
BRCA1-206ENST00000461574 IGF1RP08069 1367 aa8.84□□□□□ -0.99
BRCA1-206ENST00000461574 UHRF1BP1LA0JNW5 1464 aa8.83□□□□□ -1
BRCA1-206ENST00000461574 UACAQ9BZF9 1416 aa8.82□□□□□ -1
BRCA1-206ENST00000461574 EPRSP07814 1512 aaKnown RBP8.82□□□□□ -1
BRCA1-206ENST00000461574 CARMIL1Q5VZK9 1371 aa8.82□□□□□ -1
BRCA1-206ENST00000461574 THSD4Q6ZMP0 1018 aa8.8□□□□□ -1
BRCA1-206ENST00000461574 COL17A1Q9UMD9 1497 aaPredicted RBP8.8□□□□□ -1
BRCA1-206ENST00000461574 KDM5BQ9UGL1 1544 aa8.8□□□□□ -1
BRCA1-206ENST00000461574 GOLGA8CPA6NN73 597 aa8.79□□□□□ -1
BRCA1-206ENST00000461574 MRPL50Q8N5N7 158 aaKnown RBP8.79□□□□□ -1
BRCA1-206ENST00000461574 PCDHGA10Q9Y5H3 936 aa8.79□□□□□ -1
BRCA1-206ENST00000461574 KIAA0556O60303 1618 aa8.79□□□□□ -1
BRCA1-206ENST00000461574 KIF21BO75037 1637 aa8.79□□□□□ -1
BRCA1-206ENST00000461574 DISP1Q96F81 1524 aa8.79□□□□□ -1
BRCA1-206ENST00000461574 CFAP43Q8NDM7 1665 aa8.78□□□□□ -1
BRCA1-206ENST00000461574 WNT2BQ93097 391 aa8.78□□□□□ -1
BRCA1-206ENST00000461574 WDR7Q9Y4E6 1490 aa8.77□□□□□ -1
BRCA1-206ENST00000461574 CTTNBP2Q8WZ74 1663 aa8.77□□□□□ -1.01
BRCA1-206ENST00000461574 UGGT2Q9NYU1 1516 aa8.76□□□□□ -1.01
BRCA1-206ENST00000461574 COL9A1P20849 921 aa8.76□□□□□ -1.01
BRCA1-206ENST00000461574 NBPF3Q9H094 633 aa8.76□□□□□ -1.01
BRCA1-206ENST00000461574 PPP1R3GB7ZBB8 358 aa8.75□□□□□ -1.01
BRCA1-206ENST00000461574 PROX2Q3B8N5 592 aa8.75□□□□□ -1.01
BRCA1-206ENST00000461574 CD109Q6YHK3 1445 aa8.74□□□□□ -1.01
BRCA1-206ENST00000461574 RAPGEF2Q9Y4G8 1499 aa8.73□□□□□ -1.01
BRCA1-206ENST00000461574 PHF14O94880 888 aa8.73□□□□□ -1.01
BRCA1-206ENST00000461574 TYW1BQ6NUM6 668 aa8.73□□□□□ -1.01
BRCA1-206ENST00000461574 FBXO41Q8TF61 875 aa8.73□□□□□ -1.01
BRCA1-206ENST00000461574 MAGI3Q5TCQ9 1506 aa8.73□□□□□ -1.01
BRCA1-206ENST00000461574 CAMK2BQ13554 666 aa8.72□□□□□ -1.01
BRCA1-206ENST00000461574 FBXW7Q969H0 707 aa8.72□□□□□ -1.01
BRCA1-206ENST00000461574 RABGEF1Q9UJ41 708 aa8.72□□□□□ -1.01
BRCA1-206ENST00000461574 DPYSL4O14531 572 aa8.71□□□□□ -1.02
BRCA1-206ENST00000461574 GOLGA3Q08378 1498 aa8.7□□□□□ -1.02
BRCA1-206ENST00000461574 IFFO2Q5TF58 517 aa8.7□□□□□ -1.02
BRCA1-206ENST00000461574 ABCA8O94911 1581 aa8.69□□□□□ -1.02
BRCA1-206ENST00000461574 C6orf132Q5T0Z8 1188 aa8.68□□□□□ -1.02
BRCA1-206ENST00000461574 FAM9AQ8IZU1 332 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-206ENST00000461574 ANKK1Q8NFD2 765 aa8.68□□□□□ -1.02
BRCA1-206ENST00000461574 KIAA1468Q9P260 1216 aa8.68□□□□□ -1.02
BRCA1-206ENST00000461574 PTPRMP28827 1452 aa8.67□□□□□ -1.02
BRCA1-206ENST00000461574 BCAMP50895 628 aa8.67□□□□□ -1.02
BRCA1-206ENST00000461574 ADAMTSL3P82987 1691 aa8.67□□□□□ -1.02
BRCA1-206ENST00000461574 EPAS1Q99814 870 aa8.67□□□□□ -1.02
BRCA1-206ENST00000461574 MADDQ8WXG6 1647 aa8.66□□□□□ -1.02
BRCA1-206ENST00000461574 ARAP3Q8WWN8 1544 aa8.66□□□□□ -1.02
BRCA1-206ENST00000461574 A0A0G2JS52 829 aa8.66□□□□□ -1.02
BRCA1-206ENST00000461574 DDX12PQ92771 950 aa8.66□□□□□ -1.02
BRCA1-206ENST00000461574 RBM33Q96EV2 1170 aaKnown RBP8.66□□□□□ -1.02
BRCA1-206ENST00000461574 BCORL1Q5H9F3 1711 aa8.66□□□□□ -1.02
BRCA1-206ENST00000461574 PCF11O94913 1555 aaKnown RBP8.65□□□□□ -1.02
BRCA1-206ENST00000461574 ARID4BQ4LE39 1312 aaPredicted RBP8.65□□□□□ -1.02
BRCA1-206ENST00000461574 ARID3CA6NKF2 412 aa8.65□□□□□ -1.02
BRCA1-206ENST00000461574 LAPTM4BQ86VI4 370 aa8.65□□□□□ -1.02
BRCA1-206ENST00000461574 RIMS1Q86UR5 1692 aaKnown RBP8.65□□□□□ -1.03
BRCA1-206ENST00000461574 ABCA9Q8IUA7 1624 aa8.65□□□□□ -1.03
BRCA1-206ENST00000461574 BBXQ8WY36 941 aaPredicted RBP8.64□□□□□ -1.03
BRCA1-206ENST00000461574 ZFRQ96KR1 1074 aaKnown RBP8.64□□□□□ -1.03
BRCA1-206ENST00000461574 SEPT9Q9UHD8 586 aaPredicted RBP8.64□□□□□ -1.03
BRCA1-206ENST00000461574 SOWAHBA6NEL2 793 aa8.63□□□□□ -1.03
BRCA1-206ENST00000461574 ONECUT3O60422 494 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-206ENST00000461574 RGS20O76081 388 aa8.63□□□□□ -1.03
BRCA1-206ENST00000461574 PHLDB1Q86UU1 1377 aa8.61□□□□□ -1.03
BRCA1-206ENST00000461574 TRIM6-TRIM34B2RNG4 842 aa8.61□□□□□ -1.03
BRCA1-206ENST00000461574 NEO1Q92859 1461 aa8.61□□□□□ -1.03
BRCA1-206ENST00000461574 LMTK3Q96Q04 1460 aa8.61□□□□□ -1.03
BRCA1-206ENST00000461574 ARHGEF40Q8TER5 1519 aa8.6□□□□□ -1.03
BRCA1-206ENST00000461574 RAPGEF3O95398 923 aa8.6□□□□□ -1.03
BRCA1-206ENST00000461574 ITGBL1O95965 494 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-206ENST00000461574 WBP1LQ9NX94 342 aa8.6□□□□□ -1.03
BRCA1-206ENST00000461574 RAPGEF6Q8TEU7 1601 aa8.6□□□□□ -1.03
BRCA1-206ENST00000461574 FRMPD1Q5SYB0 1578 aa8.6□□□□□ -1.03
BRCA1-206ENST00000461574 CFAP74Q9C0B2 1584 aa8.6□□□□□ -1.03
BRCA1-206ENST00000461574 ATP10BO94823 1461 aa8.59□□□□□ -1.03
BRCA1-206ENST00000461574 NBR1Q14596 966 aa8.59□□□□□ -1.03
BRCA1-206ENST00000461574 TSR1Q2NL82 804 aaKnown RBP8.59□□□□□ -1.03
BRCA1-206ENST00000461574 P3H3Q8IVL6 736 aa8.59□□□□□ -1.03
BRCA1-206ENST00000461574 RICTORQ6R327 1708 aa8.58□□□□□ -1.04
BRCA1-206ENST00000461574 EN1Q05925 392 aaPredicted RBP8.58□□□□□ -1.04
BRCA1-206ENST00000461574 PDIA6Q15084 440 aa8.58□□□□□ -1.04
BRCA1-206ENST00000461574 FAM98CQ17RN3 349 aaKnown RBP8.58□□□□□ -1.04
BRCA1-206ENST00000461574 FER1L4A9Z1Z3 1794 aa8.58□□□□□ -1.04
BRCA1-206ENST00000461574 FANCAO15360 1455 aa8.57□□□□□ -1.04
BRCA1-206ENST00000461574 MAP3K7O43318 606 aa8.57□□□□□ -1.04
BRCA1-206ENST00000461574 TSKSQ9UJT2 592 aa8.57□□□□□ -1.04
BRCA1-206ENST00000461574 POGZQ7Z3K3 1410 aa8.56□□□□□ -1.04
BRCA1-206ENST00000461574 SPRYD3Q8NCJ5 442 aa8.56□□□□□ -1.04
BRCA1-206ENST00000461574 IRX2Q9BZI1 471 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-206ENST00000461574 DENND4BO75064 1496 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-206ENST00000461574 SAMD9Q5K651 1589 aa8.56□□□□□ -1.04
BRCA1-206ENST00000461574 HSPA2P54652 639 aa8.55□□□□□ -1.04
BRCA1-206ENST00000461574 NYAP1Q6ZVC0 841 aa8.55□□□□□ -1.04
BRCA1-206ENST00000461574 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-206ENST00000461574 HPS5Q9UPZ3 1129 aa8.55□□□□□ -1.04
BRCA1-206ENST00000461574 PRXQ9BXM0 1461 aa8.55□□□□□ -1.04
BRCA1-206ENST00000461574 EFCAB5A4FU69 1503 aa8.54□□□□□ -1.04
BRCA1-206ENST00000461574 ZFYVE16Q7Z3T8 1539 aa8.54□□□□□ -1.04
BRCA1-206ENST00000461574 SPDYE16A6NNV3 312 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms