RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 APLP1P51693 650 aa11.1□□□□□ -0.63
UBA3-204ENST00000461522 KCNC4Q03721 635 aa11.08□□□□□ -0.64
UBA3-204ENST00000461522 A0A0G2JS52 829 aa11.07□□□□□ -0.64
UBA3-204ENST00000461522 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.07□□□□□ -0.64
UBA3-204ENST00000461522 TJAP1Q5JTD0 557 aa11.06□□□□□ -0.64
UBA3-204ENST00000461522 MTRQ99707 1265 aa11.04□□□□□ -0.64
UBA3-204ENST00000461522 MAP2K5Q13163 448 aa11.02□□□□□ -0.65
UBA3-204ENST00000461522 PHOX2BQ99453 314 aa11.02□□□□□ -0.65
UBA3-204ENST00000461522 PRR14Q9BWN1 585 aa11.02□□□□□ -0.65
UBA3-204ENST00000461522 IL21Q9HBE4 155 aa11.02□□□□□ -0.65
UBA3-204ENST00000461522 SLC10A3P09131 477 aa11.01□□□□□ -0.65
UBA3-204ENST00000461522 LMOD2Q6P5Q4 547 aa11.01□□□□□ -0.65
UBA3-204ENST00000461522 DAXXQ9UER7 740 aaPredicted RBP10.99□□□□□ -0.65
UBA3-204ENST00000461522 RGS20O76081 388 aa10.98□□□□□ -0.65
UBA3-204ENST00000461522 CFHP08603 1231 aa10.98□□□□□ -0.65
UBA3-204ENST00000461522 NLRP7Q8WX94 980 aa10.98□□□□□ -0.65
UBA3-204ENST00000461522 IRF6O14896 467 aa10.97□□□□□ -0.65
UBA3-204ENST00000461522 ZNF516Q92618 1163 aa10.97□□□□□ -0.65
UBA3-204ENST00000461522 MINK1Q8N4C8 1332 aaPredicted RBP10.97□□□□□ -0.65
UBA3-204ENST00000461522 ACTN4O43707 911 aaKnown RBP10.96□□□□□ -0.65
UBA3-204ENST00000461522 KMT5BQ4FZB7 885 aa10.96□□□□□ -0.65
UBA3-204ENST00000461522 PCDHB3Q9Y5E6 796 aa10.96□□□□□ -0.65
UBA3-204ENST00000461522 COPS2P61201 443 aa10.95□□□□□ -0.66
UBA3-204ENST00000461522 RSPH4AQ5TD94 716 aa10.94□□□□□ -0.66
UBA3-204ENST00000461522 BLOC1S3Q6QNY0 202 aa10.93□□□□□ -0.66
UBA3-204ENST00000461522 ZPR1O75312 459 aa10.92□□□□□ -0.66
UBA3-204ENST00000461522 CCDC102AQ96A19 550 aa10.92□□□□□ -0.66
UBA3-204ENST00000461522 DDX11L8A8MPP1 907 aa10.91□□□□□ -0.66
UBA3-204ENST00000461522 SULF1Q8IWU6 871 aa10.9□□□□□ -0.66
UBA3-204ENST00000461522 NKX2-3Q8TAU0 364 aa10.9□□□□□ -0.66
UBA3-204ENST00000461522 ZC3H15Q8WU90 426 aaKnown RBP10.9□□□□□ -0.66
UBA3-204ENST00000461522 ZMYND10O75800 440 aa10.89□□□□□ -0.67
UBA3-204ENST00000461522 RDH13Q8NBN7 331 aa10.89□□□□□ -0.67
UBA3-204ENST00000461522 BARGINQ6ZT62 677 aa10.88□□□□□ -0.67
UBA3-204ENST00000461522 SLC24A1O60721 1099 aa10.87□□□□□ -0.67
UBA3-204ENST00000461522 PPP1R18Q6NYC8 613 aa10.87□□□□□ -0.67
UBA3-204ENST00000461522 GCGRP47871 477 aa10.86□□□□□ -0.67
UBA3-204ENST00000461522 MDM2Q00987 491 aaPredicted RBP10.85□□□□□ -0.67
UBA3-204ENST00000461522 NR1I2O75469 434 aa10.84□□□□□ -0.67
UBA3-204ENST00000461522 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.84□□□□□ -0.67
UBA3-204ENST00000461522 TLL1O43897 1013 aa10.83□□□□□ -0.68
UBA3-204ENST00000461522 CD46P15529 392 aa10.83□□□□□ -0.68
UBA3-204ENST00000461522 PUS10Q3MIT2 529 aaKnown RBP10.83□□□□□ -0.68
UBA3-204ENST00000461522 FUT2Q10981 343 aa10.82□□□□□ -0.68
UBA3-204ENST00000461522 KRI1Q8N9T8 703 aaKnown RBP10.82□□□□□ -0.68
UBA3-204ENST00000461522 TMUB1Q9BVT8 246 aa10.82□□□□□ -0.68
UBA3-204ENST00000461522 CLCN1P35523 988 aa10.81□□□□□ -0.68
UBA3-204ENST00000461522 MORN1Q5T089 497 aa10.81□□□□□ -0.68
UBA3-204ENST00000461522 SCUBE3Q8IX30 993 aa10.81□□□□□ -0.68
UBA3-204ENST00000461522 GPCPD1Q9NPB8 672 aa10.81□□□□□ -0.68
UBA3-204ENST00000461522 GGCXP38435 758 aa10.8□□□□□ -0.68
UBA3-204ENST00000461522 ATP6V1AP38606 617 aa10.8□□□□□ -0.68
UBA3-204ENST00000461522 ADH1BP00325 375 aa10.79□□□□□ -0.68
UBA3-204ENST00000461522 FAM217BQ9NTX9 383 aaPredicted RBP10.78□□□□□ -0.68
UBA3-204ENST00000461522 AMHR2Q16671 573 aa10.76□□□□□ -0.69
UBA3-204ENST00000461522 REPIN1Q9BWE0 567 aaKnown RBP10.76□□□□□ -0.69
UBA3-204ENST00000461522 RNF223E7ERA6 249 aa10.75□□□□□ -0.69
UBA3-204ENST00000461522 THAP11Q96EK4 314 aa10.75□□□□□ -0.69
UBA3-204ENST00000461522 SLC27A5Q9Y2P5 690 aa10.75□□□□□ -0.69
UBA3-204ENST00000461522 S1PR4O95977 384 aa10.74□□□□□ -0.69
UBA3-204ENST00000461522 SPSB2Q99619 263 aa10.74□□□□□ -0.69
UBA3-204ENST00000461522 PRKD2Q9BZL6 878 aa10.74□□□□□ -0.69
UBA3-204ENST00000461522 KDM4AO75164 1064 aa10.73□□□□□ -0.69
UBA3-204ENST00000461522 GRIPAP1Q4V328 841 aa10.73□□□□□ -0.69
UBA3-204ENST00000461522 SALL2Q9Y467 1007 aaPredicted RBP10.73□□□□□ -0.69
UBA3-204ENST00000461522 V9GY48 417 aaPredicted RBP10.73□□□□□ -0.69
UBA3-204ENST00000461522 BCANQ96GW7 911 aa10.72□□□□□ -0.69
UBA3-204ENST00000461522 IRX2Q9BZI1 471 aaPredicted RBP10.72□□□□□ -0.69
UBA3-204ENST00000461522 SLC6A16Q9GZN6 736 aa10.72□□□□□ -0.69
UBA3-204ENST00000461522 USP46P62068 366 aa10.71□□□□□ -0.69
UBA3-204ENST00000461522 ANKLE1Q8NAG6 615 aa10.71□□□□□ -0.69
UBA3-204ENST00000461522 TRIM66O15016 1216 aa10.7□□□□□ -0.7
UBA3-204ENST00000461522 FMNL1O95466 1100 aaPredicted RBP10.7□□□□□ -0.7
UBA3-204ENST00000461522 TTLL12Q14166 644 aaPredicted RBP10.7□□□□□ -0.7
UBA3-204ENST00000461522 BRICD5Q6PL45 260 aa10.7□□□□□ -0.7
UBA3-204ENST00000461522 AK7Q96M32 723 aa10.7□□□□□ -0.7
UBA3-204ENST00000461522 PPEF1O14829 653 aaPredicted RBP10.69□□□□□ -0.7
UBA3-204ENST00000461522 SSTR3P32745 418 aaPredicted RBP10.69□□□□□ -0.7
UBA3-204ENST00000461522 HOXA2O43364 376 aa10.68□□□□□ -0.7
UBA3-204ENST00000461522 GIGYF2Q6Y7W6 1299 aaKnown RBP10.68□□□□□ -0.7
UBA3-204ENST00000461522 RNF19BQ6ZMZ0 732 aa10.68□□□□□ -0.7
UBA3-204ENST00000461522 FAM160A2Q8N612 972 aaPredicted RBP10.68□□□□□ -0.7
UBA3-204ENST00000461522 EMID1Q96A84 441 aaPredicted RBP10.68□□□□□ -0.7
UBA3-204ENST00000461522 Q3C1V9 767 aa10.66□□□□□ -0.7
UBA3-204ENST00000461522 PARP9Q8IXQ6 854 aa10.66□□□□□ -0.7
UBA3-204ENST00000461522 HLA-CQ95604 372 aa10.66□□□□□ -0.7
UBA3-204ENST00000461522 MSS51Q4VC12 460 aa10.64□□□□□ -0.71
UBA3-204ENST00000461522 NUTM1Q86Y26 1132 aa10.64□□□□□ -0.71
UBA3-204ENST00000461522 SLC24A3Q9HC58 644 aa10.64□□□□□ -0.71
UBA3-204ENST00000461522 SLC19A1P41440 591 aa10.63□□□□□ -0.71
UBA3-204ENST00000461522 PLA2G2CQ5R387 149 aa10.63□□□□□ -0.71
UBA3-204ENST00000461522 PRDM9Q9NQV7 894 aa10.63□□□□□ -0.71
UBA3-204ENST00000461522 LIAT1Q6ZQX7 453 aa10.62□□□□□ -0.71
UBA3-204ENST00000461522 GUCA2AQ02747 115 aa10.61□□□□□ -0.71
UBA3-204ENST00000461522 SPIRE2Q8WWL2 714 aa10.61□□□□□ -0.71
UBA3-204ENST00000461522 PDE4DQ08499 809 aa10.6□□□□□ -0.71
UBA3-204ENST00000461522 SPRYD7Q5W111 196 aa10.6□□□□□ -0.71
UBA3-204ENST00000461522 USB1Q9BQ65 265 aaKnown RBP10.6□□□□□ -0.71
UBA3-204ENST00000461522 MS4A1P11836 297 aa10.59□□□□□ -0.71
UBA3-204ENST00000461522 LAPTM4AQ15012 233 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms