RNA–Protein interactions for RNA: ENST00000461434.1

PSMD4-207, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 2

Gene PSMD4, Length 801 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-207ENST00000461434 STRCP1A6NGW2 1772 aa16.51■□□□□ 0.23
PSMD4-207ENST00000461434 SLIT1O75093 1534 aa16.51■□□□□ 0.23
PSMD4-207ENST00000461434 ARHGAP23Q9P227 1491 aa16.51■□□□□ 0.23
PSMD4-207ENST00000461434 DISP3Q9P2K9 1392 aa16.51■□□□□ 0.23
PSMD4-207ENST00000461434 TET3O43151 1660 aa16.5■□□□□ 0.23
PSMD4-207ENST00000461434 NOS1P29475 1434 aa16.5■□□□□ 0.23
PSMD4-207ENST00000461434 UNC13BO14795 1591 aa16.5■□□□□ 0.23
PSMD4-207ENST00000461434 TMEM2Q9UHN6 1383 aa16.5■□□□□ 0.23
PSMD4-207ENST00000461434 ADGRB3O60242 1522 aa16.49■□□□□ 0.23
PSMD4-207ENST00000461434 ROCK1Q13464 1354 aa16.49■□□□□ 0.23
PSMD4-207ENST00000461434 TOM1O60784 492 aa16.48■□□□□ 0.23
PSMD4-207ENST00000461434 CHGAP10645 457 aaKnown RBP16.48■□□□□ 0.23
PSMD4-207ENST00000461434 BCANQ96GW7 911 aa16.48■□□□□ 0.23
PSMD4-207ENST00000461434 GCC2Q8IWJ2 1684 aa16.48■□□□□ 0.23
PSMD4-207ENST00000461434 MYO5BQ9ULV0 1848 aa16.47■□□□□ 0.23
PSMD4-207ENST00000461434 RPRD2Q5VT52 1461 aaKnown RBP16.46■□□□□ 0.23
PSMD4-207ENST00000461434 LRRC7Q96NW7 1537 aa16.45■□□□□ 0.22
PSMD4-207ENST00000461434 SLC52A1Q9NWF4 448 aa16.45■□□□□ 0.22
PSMD4-207ENST00000461434 NUP155O75694 1391 aa16.45■□□□□ 0.22
PSMD4-207ENST00000461434 E9PCH4 1651 aa16.44■□□□□ 0.22
PSMD4-207ENST00000461434 KDM5AP29375 1690 aaKnown RBP16.44■□□□□ 0.22
PSMD4-207ENST00000461434 SLC26A8Q96RN1 970 aa16.44■□□□□ 0.22
PSMD4-207ENST00000461434 HSPA1LP34931 641 aa16.43■□□□□ 0.22
PSMD4-207ENST00000461434 U3KPZ7 1027 aaPredicted RBP16.43■□□□□ 0.22
PSMD4-207ENST00000461434 IQGAP3Q86VI3 1631 aa16.43■□□□□ 0.22
PSMD4-207ENST00000461434 PPP1R15AO75807 674 aaPredicted RBP16.42■□□□□ 0.22
PSMD4-207ENST00000461434 NUTM2DQ5VT03 806 aaPredicted RBP16.41■□□□□ 0.22
PSMD4-207ENST00000461434 SAMD1Q6SPF0 538 aaPredicted RBP16.41■□□□□ 0.22
PSMD4-207ENST00000461434 RRBP1Q9P2E9 1410 aaKnown RBP16.39■□□□□ 0.21
PSMD4-207ENST00000461434 RIMS2Q9UQ26 1411 aa16.39■□□□□ 0.21
PSMD4-207ENST00000461434 ALKQ9UM73 1620 aa16.39■□□□□ 0.21
PSMD4-207ENST00000461434 RBM33Q96EV2 1170 aaKnown RBP16.39■□□□□ 0.21
PSMD4-207ENST00000461434 TMEM131LA2VDJ0 1609 aa16.38■□□□□ 0.21
PSMD4-207ENST00000461434 XIRP1Q702N8 1843 aaKnown RBP16.37■□□□□ 0.21
PSMD4-207ENST00000461434 ILDR2Q71H61 639 aa16.36■□□□□ 0.21
PSMD4-207ENST00000461434 ZFYVE9O95405 1425 aa16.36■□□□□ 0.21
PSMD4-207ENST00000461434 KCNA6P17658 529 aa16.35■□□□□ 0.21
PSMD4-207ENST00000461434 PROSER2Q86WR7 435 aaPredicted RBP16.35■□□□□ 0.21
PSMD4-207ENST00000461434 TMEM94Q12767 1356 aa16.34■□□□□ 0.21
PSMD4-207ENST00000461434 HDGFP51858 240 aaKnown RBP16.33■□□□□ 0.2
PSMD4-207ENST00000461434 PLEKHG1Q9ULL1 1385 aa16.33■□□□□ 0.2
PSMD4-207ENST00000461434 SPHKAPQ2M3C7 1700 aa16.33■□□□□ 0.2
PSMD4-207ENST00000461434 NAIPQ13075 1403 aa16.32■□□□□ 0.2
PSMD4-207ENST00000461434 TRIM52Q96A61 297 aa16.32■□□□□ 0.2
PSMD4-207ENST00000461434 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.31■□□□□ 0.2
PSMD4-207ENST00000461434 ZNF326Q5BKZ1 582 aaKnown RBP16.3■□□□□ 0.2
PSMD4-207ENST00000461434 NWD1Q149M9 1564 aa16.3■□□□□ 0.2
PSMD4-207ENST00000461434 MED1Q15648 1581 aaPredicted RBP16.29■□□□□ 0.2
PSMD4-207ENST00000461434 NKTRP30414 1462 aaKnown RBP16.28■□□□□ 0.2
PSMD4-207ENST00000461434 CHD2O14647 1828 aaKnown RBP16.27■□□□□ 0.2
PSMD4-207ENST00000461434 C14orf37Q86TY3 774 aa16.26■□□□□ 0.19
PSMD4-207ENST00000461434 ADAMTS13Q76LX8 1427 aa16.26■□□□□ 0.19
PSMD4-207ENST00000461434 CLTCL1P53675 1640 aa16.26■□□□□ 0.19
PSMD4-207ENST00000461434 HFM1A2PYH4 1435 aa16.25■□□□□ 0.19
PSMD4-207ENST00000461434 MSH6P52701 1360 aa16.25■□□□□ 0.19
PSMD4-207ENST00000461434 TBX22Q9Y458 520 aa16.24■□□□□ 0.19
PSMD4-207ENST00000461434 TRPM2O94759 1503 aa16.23■□□□□ 0.19
PSMD4-207ENST00000461434 DIP2AQ14689 1571 aa16.22■□□□□ 0.19
PSMD4-207ENST00000461434 ROBO1Q9Y6N7 1651 aa16.22■□□□□ 0.19
PSMD4-207ENST00000461434 KIF1BO60333 1816 aa16.22■□□□□ 0.19
PSMD4-207ENST00000461434 SOCS7O14512 581 aa16.19■□□□□ 0.18
PSMD4-207ENST00000461434 AMOTL2Q9Y2J4 779 aa16.19■□□□□ 0.18
PSMD4-207ENST00000461434 NRXN3Q9Y4C0 1643 aa16.19■□□□□ 0.18
PSMD4-207ENST00000461434 FAM135BQ49AJ0 1406 aa16.19■□□□□ 0.18
PSMD4-207ENST00000461434 PTPRUQ92729 1446 aa16.19■□□□□ 0.18
PSMD4-207ENST00000461434 SLAIN2Q9P270 581 aa16.17■□□□□ 0.18
PSMD4-207ENST00000461434 ZNF219Q9P2Y4 722 aaPredicted RBP16.17■□□□□ 0.18
PSMD4-207ENST00000461434 NEXMIFQ5QGS0 1516 aa16.17■□□□□ 0.18
PSMD4-207ENST00000461434 PIK3R4Q99570 1358 aa16.16■□□□□ 0.18
PSMD4-207ENST00000461434 SETBP1Q9Y6X0 1596 aa16.16■□□□□ 0.18
PSMD4-207ENST00000461434 METP08581 1390 aa16.14■□□□□ 0.17
PSMD4-207ENST00000461434 PHLPP1O60346 1717 aa16.14■□□□□ 0.17
PSMD4-207ENST00000461434 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.14■□□□□ 0.17
PSMD4-207ENST00000461434 ATF3P18847 181 aa16.14■□□□□ 0.17
PSMD4-207ENST00000461434 XRN1Q8IZH2 1706 aaKnown RBP16.12■□□□□ 0.17
PSMD4-207ENST00000461434 CADPS2Q86UW7 1296 aa16.11■□□□□ 0.17
PSMD4-207ENST00000461434 C19orf44Q9H6X5 657 aa16.11■□□□□ 0.17
PSMD4-207ENST00000461434 NCOA3Q9Y6Q9 1424 aa16.11■□□□□ 0.17
PSMD4-207ENST00000461434 RGL3Q3MIN7 710 aa16.09■□□□□ 0.17
PSMD4-207ENST00000461434 MPHOSPH9Q99550 1183 aa16.09■□□□□ 0.17
PSMD4-207ENST00000461434 VGFO15240 615 aaPredicted RBP16.08■□□□□ 0.16
PSMD4-207ENST00000461434 CCDC144AA2RUR9 1427 aa16.08■□□□□ 0.16
PSMD4-207ENST00000461434 PPLO60437 1756 aa16.08■□□□□ 0.16
PSMD4-207ENST00000461434 SETD5Q9C0A6 1442 aa16.06■□□□□ 0.16
PSMD4-207ENST00000461434 COL16A1Q07092 1604 aaPredicted RBP16.05■□□□□ 0.16
PSMD4-207ENST00000461434 RPGRIP1LQ68CZ1 1315 aa16.05■□□□□ 0.16
PSMD4-207ENST00000461434 SETD1AO15047 1707 aaKnown RBP16.05■□□□□ 0.16
PSMD4-207ENST00000461434 JCADQ9P266 1359 aa16.04■□□□□ 0.16
PSMD4-207ENST00000461434 BRINP3Q76B58 766 aa16.04■□□□□ 0.16
PSMD4-207ENST00000461434 RGS17Q9UGC6 210 aaPredicted RBP16.04■□□□□ 0.16
PSMD4-207ENST00000461434 NALCNQ8IZF0 1738 aa16.04■□□□□ 0.16
PSMD4-207ENST00000461434 ADGRL3Q9HAR2 1447 aa16.02■□□□□ 0.16
PSMD4-207ENST00000461434 ADGRF5Q8IZF2 1346 aa16.02■□□□□ 0.16
PSMD4-207ENST00000461434 DCCP43146 1447 aa16.02■□□□□ 0.15
PSMD4-207ENST00000461434 MST1RQ04912 1400 aa16.02■□□□□ 0.15
PSMD4-207ENST00000461434 AHDC1Q5TGY3 1603 aaPredicted RBP16.01■□□□□ 0.15
PSMD4-207ENST00000461434 RAB3GAP2Q9H2M9 1393 aa16.01■□□□□ 0.15
PSMD4-207ENST00000461434 ROBO2Q9HCK4 1378 aa16.01■□□□□ 0.15
PSMD4-207ENST00000461434 ASXL1Q8IXJ9 1541 aa16.01■□□□□ 0.15
PSMD4-207ENST00000461434 MEX3CQ5U5Q3 659 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms