RNA–Protein interactions for RNA: ENST00000461343.1

LSG1-205, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 428 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-205ENST00000461343 NLRP1Q9C000 1473 aa10.38□□□□□ -0.75
LSG1-205ENST00000461343 NRXN1Q9ULB1 1477 aa10.38□□□□□ -0.75
LSG1-205ENST00000461343 MADDQ8WXG6 1647 aa10.38□□□□□ -0.75
LSG1-205ENST00000461343 CHGAP10645 457 aaKnown RBP10.38□□□□□ -0.75
LSG1-205ENST00000461343 SYNMO15061 1565 aa10.38□□□□□ -0.75
LSG1-205ENST00000461343 SETBP1Q9Y6X0 1596 aa10.37□□□□□ -0.75
LSG1-205ENST00000461343 SCAF11Q99590 1463 aaKnown RBP10.36□□□□□ -0.75
LSG1-205ENST00000461343 POLR1AO95602 1720 aaPredicted RBP10.36□□□□□ -0.75
LSG1-205ENST00000461343 IFT172Q9UG01 1749 aa10.36□□□□□ -0.75
LSG1-205ENST00000461343 ADRA2BP18089 450 aa10.36□□□□□ -0.75
LSG1-205ENST00000461343 MLECQ14165 292 aa10.36□□□□□ -0.75
LSG1-205ENST00000461343 TNRQ92752 1358 aa10.36□□□□□ -0.75
LSG1-205ENST00000461343 PPLO60437 1756 aa10.35□□□□□ -0.75
LSG1-205ENST00000461343 IDI1Q13907 227 aa10.35□□□□□ -0.75
LSG1-205ENST00000461343 SIGLEC1Q9BZZ2 1709 aa10.34□□□□□ -0.75
LSG1-205ENST00000461343 FER1L4A9Z1Z3 1794 aa10.34□□□□□ -0.75
LSG1-205ENST00000461343 PIK3C2GO75747 1445 aa10.33□□□□□ -0.76
LSG1-205ENST00000461343 TMEM131LA2VDJ0 1609 aa10.33□□□□□ -0.76
LSG1-205ENST00000461343 CFAP65Q6ZU64 1925 aaKnown RBP10.33□□□□□ -0.76
LSG1-205ENST00000461343 ANP32CO43423 234 aa10.33□□□□□ -0.76
LSG1-205ENST00000461343 TMF1P82094 1093 aa10.33□□□□□ -0.76
LSG1-205ENST00000461343 CCDC7Q96M83 1385 aa10.33□□□□□ -0.76
LSG1-205ENST00000461343 UGGT1Q9NYU2 1555 aa10.33□□□□□ -0.76
LSG1-205ENST00000461343 NEXMIFQ5QGS0 1516 aa10.32□□□□□ -0.76
LSG1-205ENST00000461343 SBNO2Q9Y2G9 1366 aa10.31□□□□□ -0.76
LSG1-205ENST00000461343 C14orf93Q9H972 538 aaKnown RBP10.31□□□□□ -0.76
LSG1-205ENST00000461343 KTN1Q86UP2 1357 aaKnown RBP10.3□□□□□ -0.76
LSG1-205ENST00000461343 EID1Q9Y6B2 187 aa10.3□□□□□ -0.76
LSG1-205ENST00000461343 A2ML1A8K2U0 1454 aa10.3□□□□□ -0.76
LSG1-205ENST00000461343 IQGAP1P46940 1657 aa10.29□□□□□ -0.76
LSG1-205ENST00000461343 ST20-MTHFSA0A0A6YYL1 179 aa10.29□□□□□ -0.76
LSG1-205ENST00000461343 DDX10Q13206 875 aaKnown RBP10.29□□□□□ -0.76
LSG1-205ENST00000461343 FBXO31Q5XUX0 539 aaPredicted RBP10.29□□□□□ -0.76
LSG1-205ENST00000461343 THEMISQ8N1K5 641 aaPredicted RBP10.29□□□□□ -0.76
LSG1-205ENST00000461343 WASHC2AQ641Q2 1341 aa10.29□□□□□ -0.76
LSG1-205ENST00000461343 RIMS2Q9UQ26 1411 aa10.28□□□□□ -0.76
LSG1-205ENST00000461343 PUS7Q96PZ0 661 aaKnown RBP10.28□□□□□ -0.76
LSG1-205ENST00000461343 KIF7Q2M1P5 1343 aa10.28□□□□□ -0.76
LSG1-205ENST00000461343 ADGRF5Q8IZF2 1346 aa10.28□□□□□ -0.76
LSG1-205ENST00000461343 CCER2I3L3R5 266 aa10.27□□□□□ -0.77
LSG1-205ENST00000461343 TMEM2Q9UHN6 1383 aa10.26□□□□□ -0.77
LSG1-205ENST00000461343 MYO3AQ8NEV4 1616 aa10.26□□□□□ -0.77
LSG1-205ENST00000461343 C3P01024 1663 aa10.26□□□□□ -0.77
LSG1-205ENST00000461343 NBPF1Q3BBV0 1214 aa10.26□□□□□ -0.77
LSG1-205ENST00000461343 SETD1BQ9UPS6 1966 aaKnown RBP10.26□□□□□ -0.77
LSG1-205ENST00000461343 CENPJQ9HC77 1338 aaPredicted RBP10.26□□□□□ -0.77
LSG1-205ENST00000461343 CFAP70Q5T0N1 1121 aa10.25□□□□□ -0.77
LSG1-205ENST00000461343 NINLQ9Y2I6 1382 aa10.25□□□□□ -0.77
LSG1-205ENST00000461343 CENPBP07199 599 aaPredicted RBP10.24□□□□□ -0.77
LSG1-205ENST00000461343 HIRIP3Q9BW71 556 aaPredicted RBP10.24□□□□□ -0.77
LSG1-205ENST00000461343 ADAMTSL3P82987 1691 aa10.24□□□□□ -0.77
LSG1-205ENST00000461343 UBR1Q8IWV7 1749 aa10.24□□□□□ -0.77
LSG1-205ENST00000461343 SLIT1O75093 1534 aa10.23□□□□□ -0.77
LSG1-205ENST00000461343 ADGRB1O14514 1584 aa10.23□□□□□ -0.77
LSG1-205ENST00000461343 SIRT1Q96EB6 747 aa10.23□□□□□ -0.77
LSG1-205ENST00000461343 TESK2Q96S53 571 aa10.23□□□□□ -0.77
LSG1-205ENST00000461343 PLEKHG1Q9ULL1 1385 aa10.23□□□□□ -0.77
LSG1-205ENST00000461343 DLC1Q96QB1 1528 aa10.23□□□□□ -0.77
LSG1-205ENST00000461343 DIP2AQ14689 1571 aa10.22□□□□□ -0.77
LSG1-205ENST00000461343 MYO5BQ9ULV0 1848 aa10.22□□□□□ -0.77
LSG1-205ENST00000461343 EVC2Q86UK5 1308 aa10.22□□□□□ -0.77
LSG1-205ENST00000461343 MIER1Q8N108 512 aa10.21□□□□□ -0.77
LSG1-205ENST00000461343 LRPPRCP42704 1394 aaKnown RBP10.21□□□□□ -0.78
LSG1-205ENST00000461343 ALKQ9UM73 1620 aa10.21□□□□□ -0.78
LSG1-205ENST00000461343 RIMS1Q86UR5 1692 aaKnown RBP10.21□□□□□ -0.78
LSG1-205ENST00000461343 ZNF142P52746 1687 aaPredicted RBP10.2□□□□□ -0.78
LSG1-205ENST00000461343 RALBP1Q15311 655 aa10.2□□□□□ -0.78
LSG1-205ENST00000461343 BCANQ96GW7 911 aa10.2□□□□□ -0.78
LSG1-205ENST00000461343 ABCC11Q96J66 1382 aa10.2□□□□□ -0.78
LSG1-205ENST00000461343 PIK3R4Q99570 1358 aa10.2□□□□□ -0.78
LSG1-205ENST00000461343 YTHDC2Q9H6S0 1430 aaKnown RBP10.2□□□□□ -0.78
LSG1-205ENST00000461343 ARHGAP23Q9P227 1491 aa10.2□□□□□ -0.78
LSG1-205ENST00000461343 CEP170BQ9Y4F5 1589 aaPredicted RBP10.2□□□□□ -0.78
LSG1-205ENST00000461343 FAM135BQ49AJ0 1406 aa10.19□□□□□ -0.78
LSG1-205ENST00000461343 POLR3GLQ9BT43 218 aa10.19□□□□□ -0.78
LSG1-205ENST00000461343 POGKQ9P215 609 aa10.19□□□□□ -0.78
LSG1-205ENST00000461343 ATAD2Q6PL18 1390 aa10.18□□□□□ -0.78
LSG1-205ENST00000461343 TXNDC2Q86VQ3 553 aa10.18□□□□□ -0.78
LSG1-205ENST00000461343 ANKLE2Q86XL3 938 aa10.18□□□□□ -0.78
LSG1-205ENST00000461343 TRAK1Q9UPV9 953 aa10.18□□□□□ -0.78
LSG1-205ENST00000461343 TECPR2O15040 1411 aa10.17□□□□□ -0.78
LSG1-205ENST00000461343 KNSTRNQ9Y448 316 aa10.17□□□□□ -0.78
LSG1-205ENST00000461343 TBX22Q9Y458 520 aa10.17□□□□□ -0.78
LSG1-205ENST00000461343 QRICH2Q9H0J4 1663 aa10.17□□□□□ -0.78
LSG1-205ENST00000461343 KNDC1Q76NI1 1749 aa10.16□□□□□ -0.78
LSG1-205ENST00000461343 ARHGEF28Q8N1W1 1705 aaKnown RBP10.16□□□□□ -0.78
LSG1-205ENST00000461343 DISP3Q9P2K9 1392 aa10.16□□□□□ -0.78
LSG1-205ENST00000461343 NPC1L1Q9UHC9 1359 aa10.16□□□□□ -0.78
LSG1-205ENST00000461343 C11orf95C9JLR9 678 aaPredicted RBP10.16□□□□□ -0.78
LSG1-205ENST00000461343 CEBPAP49715 358 aaPredicted RBP10.15□□□□□ -0.78
LSG1-205ENST00000461343 PRKRIP1Q9H875 184 aaPredicted RBP10.15□□□□□ -0.78
LSG1-205ENST00000461343 PTPRMP28827 1452 aa10.15□□□□□ -0.78
LSG1-205ENST00000461343 NUTM2DQ5VT03 806 aaPredicted RBP10.14□□□□□ -0.79
LSG1-205ENST00000461343 TMEM132EQ6IEE7 984 aa10.14□□□□□ -0.79
LSG1-205ENST00000461343 CPS1P31327 1500 aa10.13□□□□□ -0.79
LSG1-205ENST00000461343 TERF2IPQ9NYB0 399 aa10.13□□□□□ -0.79
LSG1-205ENST00000461343 PTCH1Q13635 1447 aa10.13□□□□□ -0.79
LSG1-205ENST00000461343 NSD2O96028 1365 aa10.13□□□□□ -0.79
LSG1-205ENST00000461343 PRAM1Q96QH2 718 aa10.12□□□□□ -0.79
LSG1-205ENST00000461343 STK26Q9P289 416 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms