RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 THEMISQ8N1K5 641 aaPredicted RBP21.19■□□□□ 0.98
COL5A3-202ENST00000461214 UBR1Q8IWV7 1749 aa21.18■□□□□ 0.98
COL5A3-202ENST00000461214 POTEAQ6S8J7 498 aa21.17■□□□□ 0.98
COL5A3-202ENST00000461214 LRRC7Q96NW7 1537 aa21.17■□□□□ 0.98
COL5A3-202ENST00000461214 IFT172Q9UG01 1749 aa21.15■□□□□ 0.98
COL5A3-202ENST00000461214 NLRP1Q9C000 1473 aa21.15■□□□□ 0.98
COL5A3-202ENST00000461214 STRCP1A6NGW2 1772 aa21.15■□□□□ 0.98
COL5A3-202ENST00000461214 UGGT1Q9NYU2 1555 aa21.14■□□□□ 0.98
COL5A3-202ENST00000461214 ADGRB3O60242 1522 aa21.14■□□□□ 0.98
COL5A3-202ENST00000461214 TMEM131LA2VDJ0 1609 aa21.14■□□□□ 0.97
COL5A3-202ENST00000461214 IQGAP1P46940 1657 aa21.13■□□□□ 0.97
COL5A3-202ENST00000461214 ANKRD30BQ9BXX2 1392 aa21.12■□□□□ 0.97
COL5A3-202ENST00000461214 CLSPNQ9HAW4 1339 aa21.12■□□□□ 0.97
COL5A3-202ENST00000461214 MED14O60244 1454 aa21.12■□□□□ 0.97
COL5A3-202ENST00000461214 CCDC144AA2RUR9 1427 aa21.12■□□□□ 0.97
COL5A3-202ENST00000461214 PPLO60437 1756 aa21.11■□□□□ 0.97
COL5A3-202ENST00000461214 FOXD1Q16676 465 aa21.06■□□□□ 0.96
COL5A3-202ENST00000461214 SETD1AO15047 1707 aaKnown RBP21.06■□□□□ 0.96
COL5A3-202ENST00000461214 SLC52A1Q9NWF4 448 aa21.03■□□□□ 0.96
COL5A3-202ENST00000461214 CCER1Q8TC90 406 aaPredicted RBP21■□□□□ 0.95
COL5A3-202ENST00000461214 SPATA31E1Q6ZUB1 1445 aa20.99■□□□□ 0.95
COL5A3-202ENST00000461214 NEXMIFQ5QGS0 1516 aa20.98■□□□□ 0.95
COL5A3-202ENST00000461214 SLIT1O75093 1534 aa20.97■□□□□ 0.95
COL5A3-202ENST00000461214 XIRP1Q702N8 1843 aaKnown RBP20.94■□□□□ 0.94
COL5A3-202ENST00000461214 LAMC1P11047 1609 aa20.94■□□□□ 0.94
COL5A3-202ENST00000461214 FAM135BQ49AJ0 1406 aa20.94■□□□□ 0.94
COL5A3-202ENST00000461214 ARHGAP23Q9P227 1491 aa20.94■□□□□ 0.94
COL5A3-202ENST00000461214 IDI1Q13907 227 aa20.93■□□□□ 0.94
COL5A3-202ENST00000461214 SCAF11Q99590 1463 aaKnown RBP20.93■□□□□ 0.94
COL5A3-202ENST00000461214 TXNDC2Q86VQ3 553 aa20.92■□□□□ 0.94
COL5A3-202ENST00000461214 MYOM2P54296 1465 aa20.92■□□□□ 0.94
COL5A3-202ENST00000461214 LTKP29376 864 aa20.91■□□□□ 0.94
COL5A3-202ENST00000461214 KIAA1210Q9ULL0 1709 aa20.91■□□□□ 0.94
COL5A3-202ENST00000461214 RBM33Q96EV2 1170 aaKnown RBP20.9■□□□□ 0.94
COL5A3-202ENST00000461214 ZFYVE9O95405 1425 aa20.89■□□□□ 0.94
COL5A3-202ENST00000461214 ROBO1Q9Y6N7 1651 aa20.89■□□□□ 0.93
COL5A3-202ENST00000461214 UPF1Q92900 1129 aaKnown RBP eCLIP20.88■□□□□ 0.93
COL5A3-202ENST00000461214 TMEM94Q12767 1356 aa20.87■□□□□ 0.93
COL5A3-202ENST00000461214 NRXN3Q9Y4C0 1643 aa20.86■□□□□ 0.93
COL5A3-202ENST00000461214 TONSLQ96HA7 1378 aa20.85■□□□□ 0.93
COL5A3-202ENST00000461214 TMEM2Q9UHN6 1383 aa20.85■□□□□ 0.93
COL5A3-202ENST00000461214 SIN3AQ96ST3 1273 aa20.85■□□□□ 0.93
COL5A3-202ENST00000461214 STAG3Q9UJ98 1225 aa20.85■□□□□ 0.93
COL5A3-202ENST00000461214 EID1Q9Y6B2 187 aa20.85■□□□□ 0.93
COL5A3-202ENST00000461214 SETBP1Q9Y6X0 1596 aa20.85■□□□□ 0.93
COL5A3-202ENST00000461214 TRPM1Q7Z4N2 1603 aa20.84■□□□□ 0.93
COL5A3-202ENST00000461214 RIMS2Q9UQ26 1411 aa20.84■□□□□ 0.93
COL5A3-202ENST00000461214 DIP2AQ14689 1571 aa20.84■□□□□ 0.93
COL5A3-202ENST00000461214 RPGRIP1LQ68CZ1 1315 aa20.83■□□□□ 0.93
COL5A3-202ENST00000461214 NRXN1Q9ULB1 1477 aa20.83■□□□□ 0.93
COL5A3-202ENST00000461214 PROSER2Q86WR7 435 aaPredicted RBP20.83■□□□□ 0.93
COL5A3-202ENST00000461214 TIMELESSQ9UNS1 1208 aa20.82■□□□□ 0.92
COL5A3-202ENST00000461214 CHGAP10645 457 aaKnown RBP20.81■□□□□ 0.92
COL5A3-202ENST00000461214 MEX3CQ5U5Q3 659 aaKnown RBP20.81■□□□□ 0.92
COL5A3-202ENST00000461214 NEUROD1Q13562 356 aa20.8■□□□□ 0.92
COL5A3-202ENST00000461214 PHLPP1O60346 1717 aa20.79■□□□□ 0.92
COL5A3-202ENST00000461214 STAC3Q96MF2 364 aa20.79■□□□□ 0.92
COL5A3-202ENST00000461214 JCADQ9P266 1359 aa20.79■□□□□ 0.92
COL5A3-202ENST00000461214 ZNF326Q5BKZ1 582 aaKnown RBP20.78■□□□□ 0.92
COL5A3-202ENST00000461214 SLC26A8Q96RN1 970 aa20.77■□□□□ 0.92
COL5A3-202ENST00000461214 PIK3C2GO75747 1445 aa20.77■□□□□ 0.91
COL5A3-202ENST00000461214 KCNA6P17658 529 aa20.76■□□□□ 0.91
COL5A3-202ENST00000461214 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.76■□□□□ 0.91
COL5A3-202ENST00000461214 RGL3Q3MIN7 710 aa20.75■□□□□ 0.91
COL5A3-202ENST00000461214 KNDC1Q76NI1 1749 aa20.75■□□□□ 0.91
COL5A3-202ENST00000461214 HDGFP51858 240 aaKnown RBP20.74■□□□□ 0.91
COL5A3-202ENST00000461214 ZNF772Q68DY9 489 aaPredicted RBP20.74■□□□□ 0.91
COL5A3-202ENST00000461214 PRAG1Q86YV5 1406 aa20.74■□□□□ 0.91
COL5A3-202ENST00000461214 SLAIN2Q9P270 581 aa20.74■□□□□ 0.91
COL5A3-202ENST00000461214 PLEKHG1Q9ULL1 1385 aa20.73■□□□□ 0.91
COL5A3-202ENST00000461214 MSH6P52701 1360 aa20.72■□□□□ 0.91
COL5A3-202ENST00000461214 CHD2O14647 1828 aaKnown RBP20.72■□□□□ 0.91
COL5A3-202ENST00000461214 L3MBTL2Q969R5 705 aa20.72■□□□□ 0.91
COL5A3-202ENST00000461214 LRP6O75581 1613 aa20.71■□□□□ 0.91
COL5A3-202ENST00000461214 VGFO15240 615 aaPredicted RBP20.71■□□□□ 0.91
COL5A3-202ENST00000461214 BCANQ96GW7 911 aa20.71■□□□□ 0.91
COL5A3-202ENST00000461214 DCAF11Q8TEB1 546 aa20.7■□□□□ 0.9
COL5A3-202ENST00000461214 RALGAPBQ86X10 1494 aa20.69■□□□□ 0.9
COL5A3-202ENST00000461214 RXRBP28702 533 aa20.69■□□□□ 0.9
COL5A3-202ENST00000461214 PPP1R15AO75807 674 aaPredicted RBP20.68■□□□□ 0.9
COL5A3-202ENST00000461214 XRN1Q8IZH2 1706 aaKnown RBP20.67■□□□□ 0.9
COL5A3-202ENST00000461214 ASXL1Q8IXJ9 1541 aa20.67■□□□□ 0.9
COL5A3-202ENST00000461214 NWD1Q149M9 1564 aa20.67■□□□□ 0.9
COL5A3-202ENST00000461214 ARHGEF28Q8N1W1 1705 aaKnown RBP20.67■□□□□ 0.9
COL5A3-202ENST00000461214 SPATA31A6Q5VVP1 1343 aa20.66■□□□□ 0.9
COL5A3-202ENST00000461214 COL16A1Q07092 1604 aaPredicted RBP20.65■□□□□ 0.9
COL5A3-202ENST00000461214 ADGRB1O14514 1584 aa20.65■□□□□ 0.9
COL5A3-202ENST00000461214 ADAMTS13Q76LX8 1427 aa20.65■□□□□ 0.9
COL5A3-202ENST00000461214 ADGRF5Q8IZF2 1346 aa20.64■□□□□ 0.89
COL5A3-202ENST00000461214 NUTM2BA6NNL0 878 aaPredicted RBP20.64■□□□□ 0.89
COL5A3-202ENST00000461214 NUTM2EB1AL46 878 aaPredicted RBP20.64■□□□□ 0.89
COL5A3-202ENST00000461214 ZEB1P37275 1124 aaPredicted RBP20.64■□□□□ 0.89
COL5A3-202ENST00000461214 NUTM2AQ8IVF1 878 aaPredicted RBP20.64■□□□□ 0.89
COL5A3-202ENST00000461214 NKTRP30414 1462 aaKnown RBP20.62■□□□□ 0.89
COL5A3-202ENST00000461214 C14orf37Q86TY3 774 aa20.61■□□□□ 0.89
COL5A3-202ENST00000461214 KDM2AQ9Y2K7 1162 aa20.61■□□□□ 0.89
COL5A3-202ENST00000461214 NUTM2DQ5VT03 806 aaPredicted RBP20.59■□□□□ 0.89
COL5A3-202ENST00000461214 PIK3R4Q99570 1358 aa20.59■□□□□ 0.89
COL5A3-202ENST00000461214 QRICH2Q9H0J4 1663 aa20.57■□□□□ 0.88
COL5A3-202ENST00000461214 GPRASP1Q5JY77 1395 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms