RNA–Protein interactions for RNA: ENST00000461120.1

CHRD-209, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 683 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-209ENST00000461120 UGGT1Q9NYU2 1555 aa20.27■□□□□ 0.84
CHRD-209ENST00000461120 PIK3C2BO00750 1634 aa20.27■□□□□ 0.83
CHRD-209ENST00000461120 DHX57Q6P158 1386 aaKnown RBP20.26■□□□□ 0.83
CHRD-209ENST00000461120 IDI1Q13907 227 aa20.26■□□□□ 0.83
CHRD-209ENST00000461120 LRRC7Q96NW7 1537 aa20.24■□□□□ 0.83
CHRD-209ENST00000461120 CLTCL1P53675 1640 aa20.24■□□□□ 0.83
CHRD-209ENST00000461120 ANKRD30BQ9BXX2 1392 aa20.23■□□□□ 0.83
CHRD-209ENST00000461120 NPHP4O75161 1426 aaPredicted RBP20.21■□□□□ 0.83
CHRD-209ENST00000461120 THEMISQ8N1K5 641 aaPredicted RBP20.2■□□□□ 0.82
CHRD-209ENST00000461120 STRCP1A6NGW2 1772 aa20.2■□□□□ 0.82
CHRD-209ENST00000461120 IQGAP1P46940 1657 aa20.19■□□□□ 0.82
CHRD-209ENST00000461120 CCDC144AA2RUR9 1427 aa20.19■□□□□ 0.82
CHRD-209ENST00000461120 UBR1Q8IWV7 1749 aa20.19■□□□□ 0.82
CHRD-209ENST00000461120 ADGRB3O60242 1522 aa20.19■□□□□ 0.82
CHRD-209ENST00000461120 KDM5AP29375 1690 aaKnown RBP20.19■□□□□ 0.82
CHRD-209ENST00000461120 STAG3Q9UJ98 1225 aa20.18■□□□□ 0.82
CHRD-209ENST00000461120 MED14O60244 1454 aa20.18■□□□□ 0.82
CHRD-209ENST00000461120 TMEM131LA2VDJ0 1609 aa20.17■□□□□ 0.82
CHRD-209ENST00000461120 CHGAP10645 457 aaKnown RBP20.16■□□□□ 0.82
CHRD-209ENST00000461120 FAM135BQ49AJ0 1406 aa20.16■□□□□ 0.82
CHRD-209ENST00000461120 KIF1BO60333 1816 aa20.14■□□□□ 0.81
CHRD-209ENST00000461120 MYO5BQ9ULV0 1848 aa20.13■□□□□ 0.81
CHRD-209ENST00000461120 ZNF772Q68DY9 489 aaPredicted RBP20.13■□□□□ 0.81
CHRD-209ENST00000461120 ARHGAP23Q9P227 1491 aa20.11■□□□□ 0.81
CHRD-209ENST00000461120 SPATA31E1Q6ZUB1 1445 aa20.1■□□□□ 0.81
CHRD-209ENST00000461120 TMEM2Q9UHN6 1383 aa20.1■□□□□ 0.81
CHRD-209ENST00000461120 SLIT1O75093 1534 aa20.1■□□□□ 0.81
CHRD-209ENST00000461120 ZNF326Q5BKZ1 582 aaKnown RBP20.07■□□□□ 0.8
CHRD-209ENST00000461120 XIRP1Q702N8 1843 aaKnown RBP20.06■□□□□ 0.8
CHRD-209ENST00000461120 ZFYVE9O95405 1425 aa20.06■□□□□ 0.8
CHRD-209ENST00000461120 SIN3AQ96ST3 1273 aa20.06■□□□□ 0.8
CHRD-209ENST00000461120 RIMS2Q9UQ26 1411 aa20.06■□□□□ 0.8
CHRD-209ENST00000461120 ROBO1Q9Y6N7 1651 aa20.06■□□□□ 0.8
CHRD-209ENST00000461120 RXRBP28702 533 aa20.05■□□□□ 0.8
CHRD-209ENST00000461120 RGL3Q3MIN7 710 aa20.05■□□□□ 0.8
CHRD-209ENST00000461120 MEX3CQ5U5Q3 659 aaKnown RBP20.05■□□□□ 0.8
CHRD-209ENST00000461120 LTKP29376 864 aa20.04■□□□□ 0.8
CHRD-209ENST00000461120 TXNDC2Q86VQ3 553 aa20.04■□□□□ 0.8
CHRD-209ENST00000461120 SCAF11Q99590 1463 aaKnown RBP20.04■□□□□ 0.8
CHRD-209ENST00000461120 NEXMIFQ5QGS0 1516 aa20.03■□□□□ 0.8
CHRD-209ENST00000461120 CCER1Q8TC90 406 aaPredicted RBP20.03■□□□□ 0.8
CHRD-209ENST00000461120 ZRANB1Q9UGI0 708 aa20.03■□□□□ 0.8
CHRD-209ENST00000461120 EID1Q9Y6B2 187 aa20.03■□□□□ 0.8
CHRD-209ENST00000461120 JCADQ9P266 1359 aa20.03■□□□□ 0.8
CHRD-209ENST00000461120 RPGRIP1LQ68CZ1 1315 aa20.02■□□□□ 0.8
CHRD-209ENST00000461120 CLSPNQ9HAW4 1339 aa20.02■□□□□ 0.8
CHRD-209ENST00000461120 HDGFP51858 240 aaKnown RBP20.02■□□□□ 0.8
CHRD-209ENST00000461120 NEUROD1Q13562 356 aa20.01■□□□□ 0.79
CHRD-209ENST00000461120 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.01■□□□□ 0.79
CHRD-209ENST00000461120 PHLPP1O60346 1717 aa20.01■□□□□ 0.79
CHRD-209ENST00000461120 NUTM2DQ5VT03 806 aaPredicted RBP20■□□□□ 0.79
CHRD-209ENST00000461120 PPLO60437 1756 aa19.99■□□□□ 0.79
CHRD-209ENST00000461120 CDK12Q9NYV4 1490 aaPredicted RBP19.99■□□□□ 0.79
CHRD-209ENST00000461120 PPP1R15AO75807 674 aaPredicted RBP19.98■□□□□ 0.79
CHRD-209ENST00000461120 IFT172Q9UG01 1749 aa19.98■□□□□ 0.79
CHRD-209ENST00000461120 PLEKHG1Q9ULL1 1385 aa19.95■□□□□ 0.79
CHRD-209ENST00000461120 VGFO15240 615 aaPredicted RBP19.95■□□□□ 0.78
CHRD-209ENST00000461120 SPATA31A6Q5VVP1 1343 aa19.94■□□□□ 0.78
CHRD-209ENST00000461120 MYOM2P54296 1465 aa19.92■□□□□ 0.78
CHRD-209ENST00000461120 DCAF11Q8TEB1 546 aa19.92■□□□□ 0.78
CHRD-209ENST00000461120 ADGRF5Q8IZF2 1346 aa19.92■□□□□ 0.78
CHRD-209ENST00000461120 L3MBTL2Q969R5 705 aa19.91■□□□□ 0.78
CHRD-209ENST00000461120 BCANQ96GW7 911 aa19.9■□□□□ 0.78
CHRD-209ENST00000461120 STAC3Q96MF2 364 aa19.9■□□□□ 0.78
CHRD-209ENST00000461120 KDM2AQ9Y2K7 1162 aa19.9■□□□□ 0.78
CHRD-209ENST00000461120 TONSLQ96HA7 1378 aa19.9■□□□□ 0.78
CHRD-209ENST00000461120 NRXN1Q9ULB1 1477 aa19.89■□□□□ 0.77
CHRD-209ENST00000461120 SETBP1Q9Y6X0 1596 aa19.89■□□□□ 0.77
CHRD-209ENST00000461120 NRXN3Q9Y4C0 1643 aa19.88■□□□□ 0.77
CHRD-209ENST00000461120 ADAMTS13Q76LX8 1427 aa19.88■□□□□ 0.77
CHRD-209ENST00000461120 SLC26A8Q96RN1 970 aa19.87■□□□□ 0.77
CHRD-209ENST00000461120 PIK3C2GO75747 1445 aa19.86■□□□□ 0.77
CHRD-209ENST00000461120 NUTM2BA6NNL0 878 aaPredicted RBP19.86■□□□□ 0.77
CHRD-209ENST00000461120 NUTM2EB1AL46 878 aaPredicted RBP19.86■□□□□ 0.77
CHRD-209ENST00000461120 NUTM2AQ8IVF1 878 aaPredicted RBP19.86■□□□□ 0.77
CHRD-209ENST00000461120 RBM33Q96EV2 1170 aaKnown RBP19.86■□□□□ 0.77
CHRD-209ENST00000461120 TBX22Q9Y458 520 aa19.85■□□□□ 0.77
CHRD-209ENST00000461120 DIP2AQ14689 1571 aa19.85■□□□□ 0.77
CHRD-209ENST00000461120 TMEM94Q12767 1356 aa19.84■□□□□ 0.77
CHRD-209ENST00000461120 LRP6O75581 1613 aa19.83■□□□□ 0.76
CHRD-209ENST00000461120 TIMELESSQ9UNS1 1208 aa19.82■□□□□ 0.76
CHRD-209ENST00000461120 PRAG1Q86YV5 1406 aa19.82■□□□□ 0.76
CHRD-209ENST00000461120 PROSER2Q86WR7 435 aaPredicted RBP19.81■□□□□ 0.76
CHRD-209ENST00000461120 C14orf93Q9H972 538 aaKnown RBP19.8■□□□□ 0.76
CHRD-209ENST00000461120 SLAIN2Q9P270 581 aa19.8■□□□□ 0.76
CHRD-209ENST00000461120 ATAD2Q6PL18 1390 aa19.8■□□□□ 0.76
CHRD-209ENST00000461120 COL16A1Q07092 1604 aaPredicted RBP19.8■□□□□ 0.76
CHRD-209ENST00000461120 SHPRHQ149N8 1683 aa19.79■□□□□ 0.76
CHRD-209ENST00000461120 CFAP70Q5T0N1 1121 aa19.79■□□□□ 0.76
CHRD-209ENST00000461120 METP08581 1390 aa19.79■□□□□ 0.76
CHRD-209ENST00000461120 LAMC1P11047 1609 aa19.79■□□□□ 0.76
CHRD-209ENST00000461120 MSH6P52701 1360 aa19.79■□□□□ 0.76
CHRD-209ENST00000461120 PIK3R4Q99570 1358 aa19.78■□□□□ 0.76
CHRD-209ENST00000461120 RBM6P78332 1123 aaKnown RBP19.77■□□□□ 0.76
CHRD-209ENST00000461120 ASXL1Q8IXJ9 1541 aa19.76■□□□□ 0.75
CHRD-209ENST00000461120 NBPF8Q3BBV2 869 aa19.75■□□□□ 0.75
CHRD-209ENST00000461120 PTPRUQ92729 1446 aa19.75■□□□□ 0.75
CHRD-209ENST00000461120 CHD2O14647 1828 aaKnown RBP19.74■□□□□ 0.75
CHRD-209ENST00000461120 KIAA1210Q9ULL0 1709 aa19.74■□□□□ 0.75
CHRD-209ENST00000461120 KCNA6P17658 529 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms