RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 CAMK2BQ13554 666 aa9.27□□□□□ -0.93
NUP98-208ENST00000461047 ERCC6L2Q5T890 1561 aa9.26□□□□□ -0.93
NUP98-208ENST00000461047 DPYSL4O14531 572 aa9.26□□□□□ -0.93
NUP98-208ENST00000461047 PTPREP23469 700 aa9.26□□□□□ -0.93
NUP98-208ENST00000461047 ADGRD1Q6QNK2 874 aa9.26□□□□□ -0.93
NUP98-208ENST00000461047 ZDHHC16Q969W1 377 aa9.26□□□□□ -0.93
NUP98-208ENST00000461047 ARAP1Q96P48 1450 aa9.26□□□□□ -0.93
NUP98-208ENST00000461047 TK2O00142 265 aa9.25□□□□□ -0.93
NUP98-208ENST00000461047 BCL2L12Q9HB09 334 aa9.25□□□□□ -0.93
NUP98-208ENST00000461047 UHRF1BP1LA0JNW5 1464 aa9.24□□□□□ -0.93
NUP98-208ENST00000461047 PLEKHD1A6NEE1 506 aa9.24□□□□□ -0.93
NUP98-208ENST00000461047 DMRTA1Q5VZB9 504 aa9.24□□□□□ -0.93
NUP98-208ENST00000461047 CASKIN1Q8WXD9 1431 aa9.23□□□□□ -0.93
NUP98-208ENST00000461047 E2F4Q16254 413 aa9.23□□□□□ -0.93
NUP98-208ENST00000461047 VPS8Q8N3P4 1428 aa9.22□□□□□ -0.93
NUP98-208ENST00000461047 PLB1Q6P1J6 1458 aa9.22□□□□□ -0.93
NUP98-208ENST00000461047 ARID3CA6NKF2 412 aa9.22□□□□□ -0.93
NUP98-208ENST00000461047 ABCC2Q92887 1545 aa9.21□□□□□ -0.93
NUP98-208ENST00000461047 FBXW7Q969H0 707 aa9.21□□□□□ -0.94
NUP98-208ENST00000461047 PHF14O94880 888 aa9.2□□□□□ -0.94
NUP98-208ENST00000461047 TYW1BQ6NUM6 668 aa9.2□□□□□ -0.94
NUP98-208ENST00000461047 ADAM33Q9BZ11 813 aa9.2□□□□□ -0.94
NUP98-208ENST00000461047 CCDC18Q5T9S5 1454 aa9.2□□□□□ -0.94
NUP98-208ENST00000461047 FYCO1Q9BQS8 1478 aa9.2□□□□□ -0.94
NUP98-208ENST00000461047 ABCA8O94911 1581 aa9.2□□□□□ -0.94
NUP98-208ENST00000461047 PCDHGA10Q9Y5H3 936 aa9.19□□□□□ -0.94
NUP98-208ENST00000461047 RAPGEF6Q8TEU7 1601 aa9.19□□□□□ -0.94
NUP98-208ENST00000461047 HECW1Q76N89 1606 aa9.18□□□□□ -0.94
NUP98-208ENST00000461047 EPAS1Q99814 870 aa9.18□□□□□ -0.94
NUP98-208ENST00000461047 KDM5BQ9UGL1 1544 aa9.18□□□□□ -0.94
NUP98-208ENST00000461047 ATP10BO94823 1461 aa9.17□□□□□ -0.94
NUP98-208ENST00000461047 SPDYE16A6NNV3 312 aaPredicted RBP9.17□□□□□ -0.94
NUP98-208ENST00000461047 EPRSP07814 1512 aaKnown RBP9.16□□□□□ -0.94
NUP98-208ENST00000461047 NUP153P49790 1475 aaKnown RBP9.16□□□□□ -0.94
NUP98-208ENST00000461047 MTUS2Q5JR59 1369 aa9.16□□□□□ -0.94
NUP98-208ENST00000461047 DDX12PQ92771 950 aa9.16□□□□□ -0.94
NUP98-208ENST00000461047 SLC4A5Q9BY07 1137 aa9.16□□□□□ -0.94
NUP98-208ENST00000461047 TSHZ2Q9NRE2 1034 aa9.16□□□□□ -0.94
NUP98-208ENST00000461047 VPS9D1Q9Y2B5 631 aa9.16□□□□□ -0.94
NUP98-208ENST00000461047 HRO43593 1189 aa9.15□□□□□ -0.94
NUP98-208ENST00000461047 ADCY10Q96PN6 1610 aa9.14□□□□□ -0.95
NUP98-208ENST00000461047 GOLGA8CPA6NN73 597 aa9.14□□□□□ -0.95
NUP98-208ENST00000461047 PDIA6Q15084 440 aa9.14□□□□□ -0.95
NUP98-208ENST00000461047 ASXL2Q76L83 1435 aa9.14□□□□□ -0.95
NUP98-208ENST00000461047 PCF11O94913 1555 aaKnown RBP9.13□□□□□ -0.95
NUP98-208ENST00000461047 PPP1R3GB7ZBB8 358 aa9.13□□□□□ -0.95
NUP98-208ENST00000461047 FAM69CQ0P6D2 419 aa9.13□□□□□ -0.95
NUP98-208ENST00000461047 RBM33Q96EV2 1170 aaKnown RBP9.13□□□□□ -0.95
NUP98-208ENST00000461047 ZBED2Q9BTP6 218 aa9.13□□□□□ -0.95
NUP98-208ENST00000461047 MAP3K1Q13233 1512 aa9.13□□□□□ -0.95
NUP98-208ENST00000461047 MAPKBP1O60336 1514 aa9.12□□□□□ -0.95
NUP98-208ENST00000461047 NBR1Q14596 966 aa9.12□□□□□ -0.95
NUP98-208ENST00000461047 NBPF3Q9H094 633 aa9.12□□□□□ -0.95
NUP98-208ENST00000461047 HCSTQ9UBK5 93 aa9.12□□□□□ -0.95
NUP98-208ENST00000461047 WDR7Q9Y4E6 1490 aa9.12□□□□□ -0.95
NUP98-208ENST00000461047 MRPL50Q8N5N7 158 aaKnown RBP9.11□□□□□ -0.95
NUP98-208ENST00000461047 KCTD12Q96CX2 325 aaKnown RBP9.11□□□□□ -0.95
NUP98-208ENST00000461047 TROQ12816 1431 aaPredicted RBP9.11□□□□□ -0.95
NUP98-208ENST00000461047 ZCCHC11Q5TAX3 1644 aaKnown RBP9.1□□□□□ -0.95
NUP98-208ENST00000461047 MAP3K7O43318 606 aa9.1□□□□□ -0.95
NUP98-208ENST00000461047 ARIH1Q9Y4X5 557 aaPredicted RBP9.1□□□□□ -0.95
NUP98-208ENST00000461047 CDK13Q14004 1512 aaKnown RBP9.1□□□□□ -0.95
NUP98-208ENST00000461047 GRXCR2A6NFK2 248 aa9.09□□□□□ -0.95
NUP98-208ENST00000461047 C6orf132Q5T0Z8 1188 aa9.09□□□□□ -0.95
NUP98-208ENST00000461047 ABCC10Q5T3U5 1492 aa9.08□□□□□ -0.96
NUP98-208ENST00000461047 COL9A1P20849 921 aa9.07□□□□□ -0.96
NUP98-208ENST00000461047 PLCB2Q00722 1185 aa9.07□□□□□ -0.96
NUP98-208ENST00000461047 KANK4Q5T7N3 995 aaPredicted RBP9.07□□□□□ -0.96
NUP98-208ENST00000461047 EFCAB2Q5VUJ9 269 aa9.07□□□□□ -0.96
NUP98-208ENST00000461047 RABGEF1Q9UJ41 708 aa9.07□□□□□ -0.96
NUP98-208ENST00000461047 CCNB3Q8WWL7 1395 aa9.07□□□□□ -0.96
NUP98-208ENST00000461047 LRRC9Q6ZRR7 1453 aa9.07□□□□□ -0.96
NUP98-208ENST00000461047 TIAM1Q13009 1591 aa9.07□□□□□ -0.96
NUP98-208ENST00000461047 EHBP1L1Q8N3D4 1523 aa9.06□□□□□ -0.96
NUP98-208ENST00000461047 EN1Q05925 392 aaPredicted RBP9.06□□□□□ -0.96
NUP98-208ENST00000461047 PROX2Q3B8N5 592 aa9.06□□□□□ -0.96
NUP98-208ENST00000461047 CFDP1Q9UEE9 299 aaPredicted RBP9.06□□□□□ -0.96
NUP98-208ENST00000461047 CD109Q6YHK3 1445 aa9.05□□□□□ -0.96
NUP98-208ENST00000461047 BHMG1C9JSJ3 638 aaPredicted RBP9.05□□□□□ -0.96
NUP98-208ENST00000461047 PHLDB1Q86UU1 1377 aa9.04□□□□□ -0.96
NUP98-208ENST00000461047 ARHGEF1Q92888 912 aaKnown RBP9.04□□□□□ -0.96
NUP98-208ENST00000461047 WNT2BQ93097 391 aa9.04□□□□□ -0.96
NUP98-208ENST00000461047 KIF14Q15058 1648 aa9.04□□□□□ -0.96
NUP98-208ENST00000461047 GLI2P10070 1586 aa9.03□□□□□ -0.96
NUP98-208ENST00000461047 PTPN5P54829 565 aa9.03□□□□□ -0.96
NUP98-208ENST00000461047 PPARGC1BQ86YN6 1023 aaKnown RBP9.03□□□□□ -0.96
NUP98-208ENST00000461047 ZNF777Q9ULD5 760 aaPredicted RBP9.03□□□□□ -0.96
NUP98-208ENST00000461047 TEX14Q8IWB6 1497 aa9.02□□□□□ -0.96
NUP98-208ENST00000461047 CFAP43Q8NDM7 1665 aa9.02□□□□□ -0.97
NUP98-208ENST00000461047 ONECUT3O60422 494 aaPredicted RBP9.02□□□□□ -0.97
NUP98-208ENST00000461047 RSPH4AQ5TD94 716 aa9.02□□□□□ -0.97
NUP98-208ENST00000461047 KIAA1468Q9P260 1216 aa9.02□□□□□ -0.97
NUP98-208ENST00000461047 PLCH2O75038 1416 aa9.02□□□□□ -0.97
NUP98-208ENST00000461047 NCOA2Q15596 1464 aa9.02□□□□□ -0.97
NUP98-208ENST00000461047 TRIM6-TRIM34B2RNG4 842 aa9.01□□□□□ -0.97
NUP98-208ENST00000461047 TSR1Q2NL82 804 aaKnown RBP9.01□□□□□ -0.97
NUP98-208ENST00000461047 CERKQ8TCT0 537 aa9.01□□□□□ -0.97
NUP98-208ENST00000461047 SUPT6HQ7KZ85 1726 aaKnown RBP9□□□□□ -0.97
NUP98-208ENST00000461047 LAPTM4BQ86VI4 370 aa9□□□□□ -0.97
NUP98-208ENST00000461047 PACS2Q86VP3 889 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms