RNA–Protein interactions for RNA: ENST00000461004.1

RTN4-212, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 422 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-212ENST00000461004 DHX29Q7Z478 1369 aaKnown RBP11.16□□□□□ -0.62
RTN4-212ENST00000461004 GTPBP6O43824 516 aaPredicted RBP11.15□□□□□ -0.62
RTN4-212ENST00000461004 SPRYD3Q8NCJ5 442 aa11.15□□□□□ -0.62
RTN4-212ENST00000461004 DNMT1P26358 1616 aaKnown RBP11.15□□□□□ -0.62
RTN4-212ENST00000461004 RRBP1Q9P2E9 1410 aaKnown RBP11.15□□□□□ -0.62
RTN4-212ENST00000461004 BCORL1Q5H9F3 1711 aa11.15□□□□□ -0.63
RTN4-212ENST00000461004 GGT6Q6P531 493 aa11.14□□□□□ -0.63
RTN4-212ENST00000461004 MAST1Q9Y2H9 1570 aa11.14□□□□□ -0.63
RTN4-212ENST00000461004 ADAMTSL3P82987 1691 aa11.14□□□□□ -0.63
RTN4-212ENST00000461004 PLXNC1O60486 1568 aa11.13□□□□□ -0.63
RTN4-212ENST00000461004 REREQ9P2R6 1566 aa11.13□□□□□ -0.63
RTN4-212ENST00000461004 KIF3BO15066 747 aa11.13□□□□□ -0.63
RTN4-212ENST00000461004 TMEM106CQ9BVX2 250 aa11.13□□□□□ -0.63
RTN4-212ENST00000461004 ADGBQ8N7X0 1667 aa11.13□□□□□ -0.63
RTN4-212ENST00000461004 AGLP35573 1532 aa11.13□□□□□ -0.63
RTN4-212ENST00000461004 CROCC2H7BZ55 1655 aa11.12□□□□□ -0.63
RTN4-212ENST00000461004 CEBPAP49715 358 aaPredicted RBP11.12□□□□□ -0.63
RTN4-212ENST00000461004 MADDQ8WXG6 1647 aa11.12□□□□□ -0.63
RTN4-212ENST00000461004 KIF15Q9NS87 1388 aa11.12□□□□□ -0.63
RTN4-212ENST00000461004 SHANK2Q9UPX8 1470 aa11.12□□□□□ -0.63
RTN4-212ENST00000461004 NCOA1Q15788 1441 aa11.11□□□□□ -0.63
RTN4-212ENST00000461004 CABP2Q9NPB3 220 aa11.11□□□□□ -0.63
RTN4-212ENST00000461004 BMP2KQ9NSY1 1161 aaPredicted RBP11.11□□□□□ -0.63
RTN4-212ENST00000461004 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.11□□□□□ -0.63
RTN4-212ENST00000461004 HAP1P54257 671 aaPredicted RBP11.1□□□□□ -0.63
RTN4-212ENST00000461004 EFCAB3Q8N7B9 438 aa11.1□□□□□ -0.63
RTN4-212ENST00000461004 ANKRD30AQ9BXX3 1397 aa11.1□□□□□ -0.63
RTN4-212ENST00000461004 RIMS1Q86UR5 1692 aaKnown RBP11.09□□□□□ -0.63
RTN4-212ENST00000461004 PTPRMP28827 1452 aa11.09□□□□□ -0.63
RTN4-212ENST00000461004 TTLL13PA6NNM8 815 aa11.09□□□□□ -0.63
RTN4-212ENST00000461004 GABBR2O75899 941 aa11.09□□□□□ -0.63
RTN4-212ENST00000461004 ADGRL2O95490 1459 aa11.08□□□□□ -0.64
RTN4-212ENST00000461004 TIE1P35590 1138 aa11.08□□□□□ -0.64
RTN4-212ENST00000461004 MFRPQ9BY79 579 aa11.08□□□□□ -0.64
RTN4-212ENST00000461004 TSHZ2Q9NRE2 1034 aa11.07□□□□□ -0.64
RTN4-212ENST00000461004 DUOX2Q9NRD8 1548 aa11.07□□□□□ -0.64
RTN4-212ENST00000461004 FER1L4A9Z1Z3 1794 aa11.05□□□□□ -0.64
RTN4-212ENST00000461004 ESF1Q9H501 851 aaKnown RBP11.05□□□□□ -0.64
RTN4-212ENST00000461004 ROCK1Q13464 1354 aa11.04□□□□□ -0.64
RTN4-212ENST00000461004 ZMYM3Q14202 1370 aa11.04□□□□□ -0.64
RTN4-212ENST00000461004 ANKRD50Q9ULJ7 1429 aa11.04□□□□□ -0.64
RTN4-212ENST00000461004 CLCN6P51797 869 aa11.04□□□□□ -0.64
RTN4-212ENST00000461004 WASHC2CQ9Y4E1 1318 aa11.04□□□□□ -0.64
RTN4-212ENST00000461004 ERBINQ96RT1 1412 aa11.03□□□□□ -0.64
RTN4-212ENST00000461004 MROH1Q8NDA8 1641 aa11.03□□□□□ -0.64
RTN4-212ENST00000461004 FBXO31Q5XUX0 539 aaPredicted RBP11.03□□□□□ -0.64
RTN4-212ENST00000461004 FBXO22Q8NEZ5 403 aa11.03□□□□□ -0.64
RTN4-212ENST00000461004 PHF8Q9UPP1 1060 aa11.03□□□□□ -0.64
RTN4-212ENST00000461004 CLTCQ00610 1675 aaKnown RBP11.02□□□□□ -0.64
RTN4-212ENST00000461004 ATMINO43313 823 aaPredicted RBP11.01□□□□□ -0.65
RTN4-212ENST00000461004 ATN1P54259 1190 aaPredicted RBP11.01□□□□□ -0.65
RTN4-212ENST00000461004 RNF17Q9BXT8 1623 aaKnown RBP11.01□□□□□ -0.65
RTN4-212ENST00000461004 NAIPQ13075 1403 aa11.01□□□□□ -0.65
RTN4-212ENST00000461004 EIF2AK4Q9P2K8 1649 aaKnown RBP11□□□□□ -0.65
RTN4-212ENST00000461004 TRIM35Q9UPQ4 493 aa11□□□□□ -0.65
RTN4-212ENST00000461004 C3P01024 1663 aa11□□□□□ -0.65
RTN4-212ENST00000461004 CNTLNQ9NXG0 1405 aa11□□□□□ -0.65
RTN4-212ENST00000461004 ABCC3O15438 1527 aa10.99□□□□□ -0.65
RTN4-212ENST00000461004 SOX12O15370 315 aa10.99□□□□□ -0.65
RTN4-212ENST00000461004 MS4A4AQ96JQ5 239 aa10.99□□□□□ -0.65
RTN4-212ENST00000461004 KDM2AQ9Y2K7 1162 aa10.99□□□□□ -0.65
RTN4-212ENST00000461004 KDM5DQ9BY66 1539 aa10.99□□□□□ -0.65
RTN4-212ENST00000461004 PPP1R37O75864 691 aa10.98□□□□□ -0.65
RTN4-212ENST00000461004 ASTLQ6HA08 431 aaPredicted RBP10.98□□□□□ -0.65
RTN4-212ENST00000461004 SP7Q8TDD2 431 aaPredicted RBP10.98□□□□□ -0.65
RTN4-212ENST00000461004 HSPA2P54652 639 aa10.97□□□□□ -0.65
RTN4-212ENST00000461004 HFM1A2PYH4 1435 aa10.97□□□□□ -0.65
RTN4-212ENST00000461004 PRDM15P57071 1507 aaPredicted RBP10.97□□□□□ -0.65
RTN4-212ENST00000461004 DEPDC5O75140 1603 aa10.97□□□□□ -0.65
RTN4-212ENST00000461004 CEP152O94986 1710 aa10.96□□□□□ -0.65
RTN4-212ENST00000461004 VWDEQ8N2E2 1590 aa10.96□□□□□ -0.65
RTN4-212ENST00000461004 NUP155O75694 1391 aa10.96□□□□□ -0.65
RTN4-212ENST00000461004 PELP1Q8IZL8 1130 aaKnown RBP10.96□□□□□ -0.65
RTN4-212ENST00000461004 MROH2AA6NES4 1674 aa10.95□□□□□ -0.66
RTN4-212ENST00000461004 KANK1Q14678 1352 aa10.95□□□□□ -0.66
RTN4-212ENST00000461004 NLRP6P59044 892 aa10.95□□□□□ -0.66
RTN4-212ENST00000461004 LMTK3Q96Q04 1460 aa10.94□□□□□ -0.66
RTN4-212ENST00000461004 CFAP65Q6ZU64 1925 aaKnown RBP10.94□□□□□ -0.66
RTN4-212ENST00000461004 POTEIP0CG38 1075 aa10.94□□□□□ -0.66
RTN4-212ENST00000461004 GOLGA2Q08379 1002 aa10.94□□□□□ -0.66
RTN4-212ENST00000461004 ILDR1Q86SU0 546 aaPredicted RBP10.94□□□□□ -0.66
RTN4-212ENST00000461004 TRIM52Q96A61 297 aa10.94□□□□□ -0.66
RTN4-212ENST00000461004 RYDENQ9NUL5 291 aaKnown RBP10.94□□□□□ -0.66
RTN4-212ENST00000461004 PZPP20742 1482 aa10.93□□□□□ -0.66
RTN4-212ENST00000461004 NPATQ14207 1427 aa10.93□□□□□ -0.66
RTN4-212ENST00000461004 MKRN3Q13064 507 aaKnown RBP10.93□□□□□ -0.66
RTN4-212ENST00000461004 UNC13BO14795 1591 aa10.93□□□□□ -0.66
RTN4-212ENST00000461004 TNRQ92752 1358 aa10.92□□□□□ -0.66
RTN4-212ENST00000461004 GCC2Q8IWJ2 1684 aa10.92□□□□□ -0.66
RTN4-212ENST00000461004 CAMSAP1Q5T5Y3 1602 aa10.92□□□□□ -0.66
RTN4-212ENST00000461004 LMTK2Q8IWU2 1503 aa10.92□□□□□ -0.66
RTN4-212ENST00000461004 FAM135AQ9P2D6 1515 aa10.91□□□□□ -0.66
RTN4-212ENST00000461004 SETD1BQ9UPS6 1966 aaKnown RBP10.91□□□□□ -0.66
RTN4-212ENST00000461004 CADPS2Q86UW7 1296 aa10.91□□□□□ -0.66
RTN4-212ENST00000461004 VSIG10Q8N0Z9 540 aa10.91□□□□□ -0.66
RTN4-212ENST00000461004 ERVK-7P63135 1459 aa10.91□□□□□ -0.66
RTN4-212ENST00000461004 ZC3H13Q5T200 1668 aaKnown RBP10.91□□□□□ -0.66
RTN4-212ENST00000461004 ARHGAP31Q2M1Z3 1444 aa10.91□□□□□ -0.66
RTN4-212ENST00000461004 SETD5Q9C0A6 1442 aa10.91□□□□□ -0.66
RTN4-212ENST00000461004 UHRF1BP1Q6BDS2 1440 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms