RNA–Protein interactions for RNA: ENST00000460903.2

YIPF3-206, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 605 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-206ENST00000460903 FGD6Q6ZV73 1430 aa24.3■■□□□ 1.48
YIPF3-206ENST00000460903 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.29■■□□□ 1.481e-6■■□□□ 12.8
YIPF3-206ENST00000460903 SPATA31A6Q5VVP1 1343 aa24.28■■□□□ 1.48
YIPF3-206ENST00000460903 NOS1P29475 1434 aa24.27■■□□□ 1.48
YIPF3-206ENST00000460903 DIP2AQ14689 1571 aa24.27■■□□□ 1.48
YIPF3-206ENST00000460903 PTPN23Q9H3S7 1636 aa24.25■■□□□ 1.47
YIPF3-206ENST00000460903 SRCAPQ6ZRS2 3230 aa24.25■■□□□ 1.47
YIPF3-206ENST00000460903 ZNF772Q68DY9 489 aaPredicted RBP24.25■■□□□ 1.47
YIPF3-206ENST00000460903 ABCC5O15440 1437 aa24.25■■□□□ 1.47
YIPF3-206ENST00000460903 RRP7BPQ9NSQ0 103 aa24.24■■□□□ 1.47
YIPF3-206ENST00000460903 KANK1Q14678 1352 aa24.24■■□□□ 1.47
YIPF3-206ENST00000460903 ZFYVE9O95405 1425 aa24.24■■□□□ 1.47
YIPF3-206ENST00000460903 MEX3CQ5U5Q3 659 aaKnown RBP24.23■■□□□ 1.47
YIPF3-206ENST00000460903 TMEM131LA2VDJ0 1609 aa24.23■■□□□ 1.47
YIPF3-206ENST00000460903 CDK12Q9NYV4 1490 aaPredicted RBP24.22■■□□□ 1.47
YIPF3-206ENST00000460903 KANK4Q5T7N3 995 aaPredicted RBP24.21■■□□□ 1.47
YIPF3-206ENST00000460903 PLEKHG1Q9ULL1 1385 aa24.19■■□□□ 1.46
YIPF3-206ENST00000460903 BCANQ96GW7 911 aa24.18■■□□□ 1.46
YIPF3-206ENST00000460903 DAPK1P53355 1430 aa24.18■■□□□ 1.46
YIPF3-206ENST00000460903 VPS8Q8N3P4 1428 aa24.18■■□□□ 1.46
YIPF3-206ENST00000460903 NCOA3Q9Y6Q9 1424 aa24.18■■□□□ 1.46
YIPF3-206ENST00000460903 NHSL1Q5SYE7 1610 aa24.17■■□□□ 1.46
YIPF3-206ENST00000460903 RXRBP28702 533 aa24.17■■□□□ 1.46
YIPF3-206ENST00000460903 RIMS2Q9UQ26 1411 aa24.14■■□□□ 1.45
YIPF3-206ENST00000460903 SLC52A1Q9NWF4 448 aa24.12■■□□□ 1.45
YIPF3-206ENST00000460903 RGS12O14924 1447 aa24.11■■□□□ 1.45
YIPF3-206ENST00000460903 RPRD2Q5VT52 1461 aaKnown RBP24.11■■□□□ 1.45
YIPF3-206ENST00000460903 ADAMTS13Q76LX8 1427 aa24.1■■□□□ 1.45
YIPF3-206ENST00000460903 AFF2P51816 1311 aa24.09■■□□□ 1.45
YIPF3-206ENST00000460903 NUTM2BA6NNL0 878 aaPredicted RBP24.08■■□□□ 1.45
YIPF3-206ENST00000460903 NUTM2EB1AL46 878 aaPredicted RBP24.08■■□□□ 1.45
YIPF3-206ENST00000460903 C14orf37Q86TY3 774 aa24.08■■□□□ 1.45
YIPF3-206ENST00000460903 CADPS2Q86UW7 1296 aa24.08■■□□□ 1.45
YIPF3-206ENST00000460903 NUTM2AQ8IVF1 878 aaPredicted RBP24.08■■□□□ 1.45
YIPF3-206ENST00000460903 TBX22Q9Y458 520 aa24.08■■□□□ 1.45
YIPF3-206ENST00000460903 ASXL1Q8IXJ9 1541 aa24.08■■□□□ 1.45
YIPF3-206ENST00000460903 BRINP3Q76B58 766 aa24.06■■□□□ 1.44
YIPF3-206ENST00000460903 C19orf44Q9H6X5 657 aa24.06■■□□□ 1.44
YIPF3-206ENST00000460903 E9PCH4 1651 aa24.05■■□□□ 1.44
YIPF3-206ENST00000460903 ANKRD30AQ9BXX3 1397 aa24.05■■□□□ 1.44
YIPF3-206ENST00000460903 XRN1Q8IZH2 1706 aaKnown RBP24.05■■□□□ 1.44
YIPF3-206ENST00000460903 PPP1R15AO75807 674 aaPredicted RBP24.05■■□□□ 1.44
YIPF3-206ENST00000460903 ATF3P18847 181 aa24.04■■□□□ 1.44
YIPF3-206ENST00000460903 UNC13BO14795 1591 aa24.03■■□□□ 1.44
YIPF3-206ENST00000460903 SETD5Q9C0A6 1442 aa24.03■■□□□ 1.44
YIPF3-206ENST00000460903 CHIC2Q9UKJ5 165 aa24.03■■□□□ 1.44
YIPF3-206ENST00000460903 TRPM2O94759 1503 aa24.03■■□□□ 1.44
YIPF3-206ENST00000460903 PTPRUQ92729 1446 aa24.01■■□□□ 1.43
YIPF3-206ENST00000460903 NRXN3Q9Y4C0 1643 aa24.01■■□□□ 1.43
YIPF3-206ENST00000460903 PIK3R4Q99570 1358 aa24.01■■□□□ 1.43
YIPF3-206ENST00000460903 EP400Q96L91 3159 aa24.01■■□□□ 1.43
YIPF3-206ENST00000460903 ADGRL2O95490 1459 aa24■■□□□ 1.43
YIPF3-206ENST00000460903 DCCP43146 1447 aa23.99■■□□□ 1.43
YIPF3-206ENST00000460903 NALCNQ8IZF0 1738 aa23.98■■□□□ 1.43
YIPF3-206ENST00000460903 HDGFP51858 240 aaKnown RBP23.98■■□□□ 1.43
YIPF3-206ENST00000460903 NUTM2DQ5VT03 806 aaPredicted RBP23.98■■□□□ 1.43
YIPF3-206ENST00000460903 MST1RQ04912 1400 aa23.97■■□□□ 1.43
YIPF3-206ENST00000460903 RBM6P78332 1123 aaKnown RBP23.95■■□□□ 1.42
YIPF3-206ENST00000460903 QTRT2Q9H974 415 aaKnown RBP23.95■■□□□ 1.42
YIPF3-206ENST00000460903 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.94■■□□□ 1.42
YIPF3-206ENST00000460903 C8orf37Q96NL8 207 aa23.94■■□□□ 1.42
YIPF3-206ENST00000460903 SETBP1Q9Y6X0 1596 aa23.94■■□□□ 1.42
YIPF3-206ENST00000460903 PNPLA6Q8IY17 1366 aa23.93■■□□□ 1.42
YIPF3-206ENST00000460903 LAMC1P11047 1609 aa23.92■■□□□ 1.42
YIPF3-206ENST00000460903 AMOTL2Q9Y2J4 779 aa23.92■■□□□ 1.42
YIPF3-206ENST00000460903 ANKRD50Q9ULJ7 1429 aa23.91■■□□□ 1.42
YIPF3-206ENST00000460903 CHGAP10645 457 aaKnown RBP23.9■■□□□ 1.42
YIPF3-206ENST00000460903 IQGAP3Q86VI3 1631 aa23.89■■□□□ 1.42
YIPF3-206ENST00000460903 DDX17Q92841 729 aaKnown RBP23.89■■□□□ 1.41
YIPF3-206ENST00000460903 MARF1Q9Y4F3 1742 aaKnown RBP23.89■■□□□ 1.41
YIPF3-206ENST00000460903 LRRC59Q96AG4 307 aaKnown RBP23.88■■□□□ 1.41
YIPF3-206ENST00000460903 ATAD2Q6PL18 1390 aa23.88■■□□□ 1.41
YIPF3-206ENST00000460903 SPHKAPQ2M3C7 1700 aa23.82■■□□□ 1.4
YIPF3-206ENST00000460903 COL22A1Q8NFW1 1626 aaPredicted RBP23.82■■□□□ 1.4
YIPF3-206ENST00000460903 ADGRL3Q9HAR2 1447 aa23.82■■□□□ 1.4
YIPF3-206ENST00000460903 ADAMTS2O95450 1211 aa23.81■■□□□ 1.4
YIPF3-206ENST00000460903 NGLY1Q96IV0 654 aa23.81■■□□□ 1.4
YIPF3-206ENST00000460903 ZRANB1Q9UGI0 708 aa23.79■■□□□ 1.4
YIPF3-206ENST00000460903 LOC105371045A0A1W2PR82 267 aa23.78■■□□□ 1.4
YIPF3-206ENST00000460903 METP08581 1390 aa23.78■■□□□ 1.4
YIPF3-206ENST00000460903 BRWD3Q6RI45 1802 aa23.77■■□□□ 1.4
YIPF3-206ENST00000460903 ATRNO75882 1429 aa23.76■■□□□ 1.39
YIPF3-206ENST00000460903 USP21Q9UK80 565 aa23.75■■□□□ 1.39
YIPF3-206ENST00000460903 C1orf167Q5SNV9 1468 aa23.75■■□□□ 1.39
YIPF3-206ENST00000460903 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.73■■□□□ 1.39
YIPF3-206ENST00000460903 TRPC5Q9UL62 973 aaPredicted RBP23.73■■□□□ 1.39
YIPF3-206ENST00000460903 PTCH1Q13635 1447 aa23.72■■□□□ 1.39
YIPF3-206ENST00000460903 SOS2Q07890 1332 aaPredicted RBP23.7■■□□□ 1.38
YIPF3-206ENST00000460903 FNBP4Q8N3X1 1017 aaPredicted RBP23.7■■□□□ 1.38
YIPF3-206ENST00000460903 LRP5O75197 1615 aa23.7■■□□□ 1.38
YIPF3-206ENST00000460903 NEXMIFQ5QGS0 1516 aa23.69■■□□□ 1.38
YIPF3-206ENST00000460903 KIF1BO60333 1816 aa23.69■■□□□ 1.38
YIPF3-206ENST00000460903 FOXD1Q16676 465 aa23.69■■□□□ 1.38
YIPF3-206ENST00000460903 APLP2Q06481 763 aa23.68■■□□□ 1.38
YIPF3-206ENST00000460903 FAM50AQ14320 339 aaKnown RBP23.68■■□□□ 1.38
YIPF3-206ENST00000460903 BCL9LQ86UU0 1499 aa23.67■■□□□ 1.38
YIPF3-206ENST00000460903 CLTCL1P53675 1640 aa23.66■■□□□ 1.38
YIPF3-206ENST00000460903 MYOM2P54296 1465 aa23.66■■□□□ 1.38
YIPF3-206ENST00000460903 CCDC125Q86Z20 511 aa23.64■■□□□ 1.37
YIPF3-206ENST00000460903 ORAI2Q96SN7 254 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms