RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 KLHL34Q8N239 644 aa8.02□□□□□ -1.13
HLA-DQA1-205ENST00000460633 SLC52A1Q9NWF4 448 aa8.02□□□□□ -1.13
HLA-DQA1-205ENST00000460633 CASC1Q6TDU7 716 aa8.02□□□□□ -1.13
HLA-DQA1-205ENST00000460633 MAST1Q9Y2H9 1570 aa8.02□□□□□ -1.13
HLA-DQA1-205ENST00000460633 ATP7AQ04656 1500 aa8.02□□□□□ -1.13
HLA-DQA1-205ENST00000460633 KANK4Q5T7N3 995 aaPredicted RBP8.02□□□□□ -1.13
HLA-DQA1-205ENST00000460633 SIN3AQ96ST3 1273 aa8.02□□□□□ -1.13
HLA-DQA1-205ENST00000460633 ERICH6BQ5W0A0 696 aa8.01□□□□□ -1.13
HLA-DQA1-205ENST00000460633 ERCC6L2Q5T890 1561 aa8.01□□□□□ -1.13
HLA-DQA1-205ENST00000460633 EIF3AQ14152 1382 aaKnown RBP8.01□□□□□ -1.13
HLA-DQA1-205ENST00000460633 PSME1Q06323 249 aa8.01□□□□□ -1.13
HLA-DQA1-205ENST00000460633 TAOK2Q9UL54 1235 aa8.01□□□□□ -1.13
HLA-DQA1-205ENST00000460633 ABCC1P33527 1531 aa8.01□□□□□ -1.13
HLA-DQA1-205ENST00000460633 MS4A1P11836 297 aa8.01□□□□□ -1.13
HLA-DQA1-205ENST00000460633 KCNA4P22459 653 aa8.01□□□□□ -1.13
HLA-DQA1-205ENST00000460633 RTF1Q92541 710 aaKnown RBP8.01□□□□□ -1.13
HLA-DQA1-205ENST00000460633 CALD1Q05682 793 aaKnown RBP8□□□□□ -1.13
HLA-DQA1-205ENST00000460633 MAP3K4Q9Y6R4 1608 aa8□□□□□ -1.13
HLA-DQA1-205ENST00000460633 NAP1L5Q96NT1 182 aaPredicted RBP8□□□□□ -1.13
HLA-DQA1-205ENST00000460633 TRIM34Q9BYJ4 488 aa8□□□□□ -1.13
HLA-DQA1-205ENST00000460633 DNMT1P26358 1616 aaKnown RBP8□□□□□ -1.13
HLA-DQA1-205ENST00000460633 PAK3O75914 559 aaPredicted RBP8□□□□□ -1.13
HLA-DQA1-205ENST00000460633 ADGRL2O95490 1459 aa8□□□□□ -1.13
HLA-DQA1-205ENST00000460633 SYCP2Q9BX26 1530 aa7.99□□□□□ -1.13
HLA-DQA1-205ENST00000460633 CFAP44Q96MT7 982 aa7.99□□□□□ -1.13
HLA-DQA1-205ENST00000460633 NOL10Q9BSC4 688 aaKnown RBP7.99□□□□□ -1.13
HLA-DQA1-205ENST00000460633 ISY1Q9ULR0 285 aaKnown RBP7.99□□□□□ -1.13
HLA-DQA1-205ENST00000460633 VGFO15240 615 aaPredicted RBP7.99□□□□□ -1.13
HLA-DQA1-205ENST00000460633 CCER2I3L3R5 266 aa7.98□□□□□ -1.13
HLA-DQA1-205ENST00000460633 C16orf71Q8IYS4 520 aaPredicted RBP7.98□□□□□ -1.13
HLA-DQA1-205ENST00000460633 CCDC144AA2RUR9 1427 aa7.98□□□□□ -1.13
HLA-DQA1-205ENST00000460633 EIF2AK4Q9P2K8 1649 aaKnown RBP7.98□□□□□ -1.13
HLA-DQA1-205ENST00000460633 ZMYM4Q5VZL5 1548 aa7.97□□□□□ -1.13
HLA-DQA1-205ENST00000460633 MAP3K9P80192 1104 aa7.97□□□□□ -1.13
HLA-DQA1-205ENST00000460633 AMOTL1Q8IY63 956 aa7.97□□□□□ -1.13
HLA-DQA1-205ENST00000460633 TRIM44Q96DX7 344 aaPredicted RBP7.97□□□□□ -1.13
HLA-DQA1-205ENST00000460633 BECN1Q14457 450 aa7.97□□□□□ -1.13
HLA-DQA1-205ENST00000460633 ZRSR1Q15695 479 aaKnown RBP7.97□□□□□ -1.13
HLA-DQA1-205ENST00000460633 PDIA4P13667 645 aaKnown RBP7.97□□□□□ -1.13
HLA-DQA1-205ENST00000460633 PLXNC1O60486 1568 aa7.97□□□□□ -1.13
HLA-DQA1-205ENST00000460633 NGDNQ8NEJ9 315 aaKnown RBP7.97□□□□□ -1.13
HLA-DQA1-205ENST00000460633 ABCC5O15440 1437 aa7.96□□□□□ -1.14
HLA-DQA1-205ENST00000460633 VSIG10Q8N0Z9 540 aa7.96□□□□□ -1.14
HLA-DQA1-205ENST00000460633 TTC37Q6PGP7 1564 aa7.96□□□□□ -1.14
HLA-DQA1-205ENST00000460633 AGLP35573 1532 aa7.96□□□□□ -1.14
HLA-DQA1-205ENST00000460633 SMC4Q9NTJ3 1288 aa7.96□□□□□ -1.14
HLA-DQA1-205ENST00000460633 ARHGEF40Q8TER5 1519 aa7.95□□□□□ -1.14
HLA-DQA1-205ENST00000460633 L1TD1Q5T7N2 865 aaKnown RBP7.95□□□□□ -1.14
HLA-DQA1-205ENST00000460633 RPRD2Q5VT52 1461 aaKnown RBP7.95□□□□□ -1.14
HLA-DQA1-205ENST00000460633 OS9Q13438 667 aaPredicted RBP7.95□□□□□ -1.14
HLA-DQA1-205ENST00000460633 KNSTRNQ9Y448 316 aa7.95□□□□□ -1.14
HLA-DQA1-205ENST00000460633 SAMD9LQ8IVG5 1584 aa7.95□□□□□ -1.14
HLA-DQA1-205ENST00000460633 CLSTN1O94985 981 aa7.95□□□□□ -1.14
HLA-DQA1-205ENST00000460633 AFAP1Q8N556 730 aa7.95□□□□□ -1.14
HLA-DQA1-205ENST00000460633 UHRF1BP1Q6BDS2 1440 aa7.94□□□□□ -1.14
HLA-DQA1-205ENST00000460633 ANKLE2Q86XL3 938 aa7.94□□□□□ -1.14
HLA-DQA1-205ENST00000460633 TNRQ92752 1358 aa7.94□□□□□ -1.14
HLA-DQA1-205ENST00000460633 KDM5DQ9BY66 1539 aa7.94□□□□□ -1.14
HLA-DQA1-205ENST00000460633 PKD2Q13563 968 aa7.94□□□□□ -1.14
HLA-DQA1-205ENST00000460633 REREQ9P2R6 1566 aa7.93□□□□□ -1.14
HLA-DQA1-205ENST00000460633 RAPGEF3O95398 923 aa7.93□□□□□ -1.14
HLA-DQA1-205ENST00000460633 CCAR1Q8IX12 1150 aaKnown RBP7.93□□□□□ -1.14
HLA-DQA1-205ENST00000460633 ZC3H13Q5T200 1668 aaKnown RBP7.93□□□□□ -1.14
HLA-DQA1-205ENST00000460633 CNKSR2Q8WXI2 1034 aa7.93□□□□□ -1.14
HLA-DQA1-205ENST00000460633 TAF7LQ5H9L4 462 aa7.93□□□□□ -1.14
HLA-DQA1-205ENST00000460633 MPHOSPH9Q99550 1183 aa7.93□□□□□ -1.14
HLA-DQA1-205ENST00000460633 ANKRD30BQ9BXX2 1392 aa7.93□□□□□ -1.14
HLA-DQA1-205ENST00000460633 TSPOAP1O95153 1857 aa7.92□□□□□ -1.14
HLA-DQA1-205ENST00000460633 NPATQ14207 1427 aa7.92□□□□□ -1.14
HLA-DQA1-205ENST00000460633 TOM1O60784 492 aa7.92□□□□□ -1.14
HLA-DQA1-205ENST00000460633 NCLP19338 710 aaKnown RBP7.92□□□□□ -1.14
HLA-DQA1-205ENST00000460633 KDM2AQ9Y2K7 1162 aa7.92□□□□□ -1.14
HLA-DQA1-205ENST00000460633 IPO9Q96P70 1041 aaKnown RBP7.92□□□□□ -1.14
HLA-DQA1-205ENST00000460633 TERF2IPQ9NYB0 399 aa7.91□□□□□ -1.14
HLA-DQA1-205ENST00000460633 NCOA1Q15788 1441 aa7.91□□□□□ -1.14
HLA-DQA1-205ENST00000460633 NLRP1Q9C000 1473 aa7.91□□□□□ -1.14
HLA-DQA1-205ENST00000460633 CDC42BPAQ5VT25 1732 aa7.91□□□□□ -1.14
HLA-DQA1-205ENST00000460633 RGS3P49796 1198 aa7.9□□□□□ -1.14
HLA-DQA1-205ENST00000460633 TRAPPC8Q9Y2L5 1435 aa7.9□□□□□ -1.14
HLA-DQA1-205ENST00000460633 RAB3GAP2Q9H2M9 1393 aa7.9□□□□□ -1.14
HLA-DQA1-205ENST00000460633 NBPF8Q3BBV2 869 aa7.9□□□□□ -1.14
HLA-DQA1-205ENST00000460633 NBPF14Q5TI25 921 aa7.9□□□□□ -1.14
HLA-DQA1-205ENST00000460633 TCEAL9Q9UHQ7 104 aa7.89□□□□□ -1.15
HLA-DQA1-205ENST00000460633 KDM5CP41229 1560 aa7.89□□□□□ -1.15
HLA-DQA1-205ENST00000460633 FANCIQ9NVI1 1328 aa7.89□□□□□ -1.15
HLA-DQA1-205ENST00000460633 DHX57Q6P158 1386 aaKnown RBP7.89□□□□□ -1.15
HLA-DQA1-205ENST00000460633 LMOD3Q0VAK6 560 aa7.88□□□□□ -1.15
HLA-DQA1-205ENST00000460633 C1orf141Q5JVX7 400 aa7.88□□□□□ -1.15
HLA-DQA1-205ENST00000460633 CHMP4CQ96CF2 233 aa7.88□□□□□ -1.15
HLA-DQA1-205ENST00000460633 CROCC2H7BZ55 1655 aa7.88□□□□□ -1.15
HLA-DQA1-205ENST00000460633 GCC2Q8IWJ2 1684 aa7.88□□□□□ -1.15
HLA-DQA1-205ENST00000460633 GPRASP1Q5JY77 1395 aa7.88□□□□□ -1.15
HLA-DQA1-205ENST00000460633 LRRFIP1Q32MZ4 808 aaKnown RBP7.88□□□□□ -1.15
HLA-DQA1-205ENST00000460633 CCDC34Q96HJ3 373 aa7.88□□□□□ -1.15
HLA-DQA1-205ENST00000460633 WWC2Q6AWC2 1192 aa7.87□□□□□ -1.15
HLA-DQA1-205ENST00000460633 FRAT2O75474 233 aaPredicted RBP7.87□□□□□ -1.15
HLA-DQA1-205ENST00000460633 ZNF644Q9H582 1327 aaPredicted RBP7.87□□□□□ -1.15
HLA-DQA1-205ENST00000460633 GOLGA6L6A8MZA4 724 aa7.87□□□□□ -1.15
HLA-DQA1-205ENST00000460633 TNNT2P45379 298 aaPredicted RBP7.86□□□□□ -1.15
HLA-DQA1-205ENST00000460633 PROSER2Q86WR7 435 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms