RNA–Protein interactions for RNA: ENST00000460345.1

TNC-204, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-204ENST00000460345 HDGFP51858 240 aaKnown RBP13.99□□□□□ -0.17
TNC-204ENST00000460345 MYO3AQ8NEV4 1616 aa13.99□□□□□ -0.17
TNC-204ENST00000460345 ADGRF5Q8IZF2 1346 aa13.98□□□□□ -0.17
TNC-204ENST00000460345 UHRF1BP1Q6BDS2 1440 aa13.98□□□□□ -0.17
TNC-204ENST00000460345 RIMS2Q9UQ26 1411 aa13.98□□□□□ -0.17
TNC-204ENST00000460345 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.97□□□□□ -0.17
TNC-204ENST00000460345 UBR1Q8IWV7 1749 aa13.97□□□□□ -0.17
TNC-204ENST00000460345 PRAG1Q86YV5 1406 aa13.97□□□□□ -0.17
TNC-204ENST00000460345 CEP170BQ9Y4F5 1589 aaPredicted RBP13.96□□□□□ -0.17
TNC-204ENST00000460345 NEXMIFQ5QGS0 1516 aa13.96□□□□□ -0.17
TNC-204ENST00000460345 PPLO60437 1756 aa13.96□□□□□ -0.18
TNC-204ENST00000460345 TMEM2Q9UHN6 1383 aa13.96□□□□□ -0.18
TNC-204ENST00000460345 KDM5AP29375 1690 aaKnown RBP13.95□□□□□ -0.18
TNC-204ENST00000460345 MYOM2P54296 1465 aa13.95□□□□□ -0.18
TNC-204ENST00000460345 EID1Q9Y6B2 187 aa13.95□□□□□ -0.18
TNC-204ENST00000460345 IFT172Q9UG01 1749 aa13.95□□□□□ -0.18
TNC-204ENST00000460345 TXNDC2Q86VQ3 553 aa13.94□□□□□ -0.18
TNC-204ENST00000460345 BCANQ96GW7 911 aa13.94□□□□□ -0.18
TNC-204ENST00000460345 ZFYVE9O95405 1425 aa13.93□□□□□ -0.18
TNC-204ENST00000460345 CFAP70Q5T0N1 1121 aa13.92□□□□□ -0.18
TNC-204ENST00000460345 LTKP29376 864 aa13.91□□□□□ -0.18
TNC-204ENST00000460345 NBPF1Q3BBV0 1214 aa13.91□□□□□ -0.18
TNC-204ENST00000460345 CARD11Q9BXL7 1154 aa13.91□□□□□ -0.18
TNC-204ENST00000460345 ROCK2O75116 1388 aaKnown RBP13.91□□□□□ -0.18
TNC-204ENST00000460345 NRXN1Q9ULB1 1477 aa13.91□□□□□ -0.18
TNC-204ENST00000460345 ZNF142P52746 1687 aaPredicted RBP13.91□□□□□ -0.18
TNC-204ENST00000460345 ANKLE2Q86XL3 938 aa13.9□□□□□ -0.18
TNC-204ENST00000460345 C14orf93Q9H972 538 aaKnown RBP13.9□□□□□ -0.18
TNC-204ENST00000460345 RALGAPBQ86X10 1494 aa13.9□□□□□ -0.18
TNC-204ENST00000460345 ARHGAP23Q9P227 1491 aa13.9□□□□□ -0.18
TNC-204ENST00000460345 SLIT1O75093 1534 aa13.9□□□□□ -0.19
TNC-204ENST00000460345 PIK3C2GO75747 1445 aa13.9□□□□□ -0.19
TNC-204ENST00000460345 TRPM1Q7Z4N2 1603 aa13.88□□□□□ -0.19
TNC-204ENST00000460345 SCAF11Q99590 1463 aaKnown RBP13.87□□□□□ -0.19
TNC-204ENST00000460345 PLEKHG1Q9ULL1 1385 aa13.86□□□□□ -0.19
TNC-204ENST00000460345 HSPA2P54652 639 aa13.86□□□□□ -0.19
TNC-204ENST00000460345 EIF4G2P78344 907 aaKnown RBP eCLIP13.86□□□□□ -0.19
TNC-204ENST00000460345 TMEM132EQ6IEE7 984 aa13.86□□□□□ -0.19
TNC-204ENST00000460345 NCKAP5LQ9HCH0 1330 aa13.85□□□□□ -0.19
TNC-204ENST00000460345 GPRASP1Q5JY77 1395 aa13.84□□□□□ -0.19
TNC-204ENST00000460345 KIAA1210Q9ULL0 1709 aa13.84□□□□□ -0.19
TNC-204ENST00000460345 HSPA5P11021 654 aaKnown RBP13.84□□□□□ -0.19
TNC-204ENST00000460345 HIRIP3Q9BW71 556 aaPredicted RBP13.84□□□□□ -0.19
TNC-204ENST00000460345 ALKQ9UM73 1620 aa13.83□□□□□ -0.2
TNC-204ENST00000460345 SLC26A8Q96RN1 970 aa13.83□□□□□ -0.2
TNC-204ENST00000460345 USP47Q96K76 1375 aa13.83□□□□□ -0.2
TNC-204ENST00000460345 LMTK3Q96Q04 1460 aa13.82□□□□□ -0.2
TNC-204ENST00000460345 SETBP1Q9Y6X0 1596 aa13.82□□□□□ -0.2
TNC-204ENST00000460345 ZNF316A6NFI3 1004 aaPredicted RBP13.81□□□□□ -0.2
TNC-204ENST00000460345 STK26Q9P289 416 aa13.81□□□□□ -0.2
TNC-204ENST00000460345 TRAK1Q9UPV9 953 aa13.81□□□□□ -0.2
TNC-204ENST00000460345 LAMC1P11047 1609 aa13.81□□□□□ -0.2
TNC-204ENST00000460345 ADAMTS13Q76LX8 1427 aa13.81□□□□□ -0.2
TNC-204ENST00000460345 IQGAP1P46940 1657 aa13.8□□□□□ -0.2
TNC-204ENST00000460345 TBX22Q9Y458 520 aa13.8□□□□□ -0.2
TNC-204ENST00000460345 NPHP4O75161 1426 aaPredicted RBP13.8□□□□□ -0.2
TNC-204ENST00000460345 NRXN3Q9Y4C0 1643 aa13.79□□□□□ -0.2
TNC-204ENST00000460345 ST20-MTHFSA0A0A6YYL1 179 aa13.79□□□□□ -0.2
TNC-204ENST00000460345 METP08581 1390 aa13.79□□□□□ -0.2
TNC-204ENST00000460345 ADGRB1O14514 1584 aa13.79□□□□□ -0.2
TNC-204ENST00000460345 EIF3AQ14152 1382 aaKnown RBP13.78□□□□□ -0.2
TNC-204ENST00000460345 ADRA2BP18089 450 aa13.77□□□□□ -0.21
TNC-204ENST00000460345 ASXL1Q8IXJ9 1541 aa13.77□□□□□ -0.21
TNC-204ENST00000460345 PIAS4Q8N2W9 510 aaPredicted RBP13.77□□□□□ -0.21
TNC-204ENST00000460345 YTHDC2Q9H6S0 1430 aaKnown RBP13.77□□□□□ -0.21
TNC-204ENST00000460345 POLR1AO95602 1720 aaPredicted RBP13.76□□□□□ -0.21
TNC-204ENST00000460345 MED14O60244 1454 aa13.76□□□□□ -0.21
TNC-204ENST00000460345 LRPPRCP42704 1394 aaKnown RBP13.76□□□□□ -0.21
TNC-204ENST00000460345 POGKQ9P215 609 aa13.75□□□□□ -0.21
TNC-204ENST00000460345 SETD1AO15047 1707 aaKnown RBP13.75□□□□□ -0.21
TNC-204ENST00000460345 DIP2AQ14689 1571 aa13.75□□□□□ -0.21
TNC-204ENST00000460345 MSH5O43196 834 aa13.74□□□□□ -0.21
TNC-204ENST00000460345 AMOTL2Q9Y2J4 779 aa13.74□□□□□ -0.21
TNC-204ENST00000460345 ABCC11Q96J66 1382 aa13.73□□□□□ -0.21
TNC-204ENST00000460345 CENPJQ9HC77 1338 aaPredicted RBP13.73□□□□□ -0.21
TNC-204ENST00000460345 SAFB2Q14151 953 aaKnown RBP eCLIP13.73□□□□□ -0.21
TNC-204ENST00000460345 PRAM1Q96QH2 718 aa13.73□□□□□ -0.21
TNC-204ENST00000460345 PIK3R4Q99570 1358 aa13.72□□□□□ -0.21
TNC-204ENST00000460345 PTPRUQ92729 1446 aa13.72□□□□□ -0.21
TNC-204ENST00000460345 WAPLQ7Z5K2 1190 aa13.71□□□□□ -0.21
TNC-204ENST00000460345 TMF1P82094 1093 aa13.7□□□□□ -0.22
TNC-204ENST00000460345 SIRT1Q96EB6 747 aa13.7□□□□□ -0.22
TNC-204ENST00000460345 TESK2Q96S53 571 aa13.7□□□□□ -0.22
TNC-204ENST00000460345 POLR3GLQ9BT43 218 aa13.7□□□□□ -0.22
TNC-204ENST00000460345 STRCQ7RTU9 1775 aa13.69□□□□□ -0.22
TNC-204ENST00000460345 C11orf95C9JLR9 678 aaPredicted RBP13.69□□□□□ -0.22
TNC-204ENST00000460345 SLC24A1O60721 1099 aa13.69□□□□□ -0.22
TNC-204ENST00000460345 KCNA6P17658 529 aa13.69□□□□□ -0.22
TNC-204ENST00000460345 DMRT2Q9Y5R5 561 aa13.69□□□□□ -0.22
TNC-204ENST00000460345 DLC1Q96QB1 1528 aa13.69□□□□□ -0.22
TNC-204ENST00000460345 ARHGEF28Q8N1W1 1705 aaKnown RBP13.68□□□□□ -0.22
TNC-204ENST00000460345 TECPR2O15040 1411 aa13.68□□□□□ -0.22
TNC-204ENST00000460345 ROBO2Q9HCK4 1378 aa13.68□□□□□ -0.22
TNC-204ENST00000460345 PLEKHH1Q9ULM0 1364 aa13.68□□□□□ -0.22
TNC-204ENST00000460345 MINK1Q8N4C8 1332 aaPredicted RBP13.67□□□□□ -0.22
TNC-204ENST00000460345 FAM135BQ49AJ0 1406 aa13.66□□□□□ -0.22
TNC-204ENST00000460345 KNDC1Q76NI1 1749 aa13.66□□□□□ -0.22
TNC-204ENST00000460345 KIF7Q2M1P5 1343 aa13.65□□□□□ -0.22
TNC-204ENST00000460345 WASHC2AQ641Q2 1341 aa13.65□□□□□ -0.22
TNC-204ENST00000460345 CPS1P31327 1500 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms