RNA–Protein interactions for RNA: ENST00000460125.1

NUCB1-208, Transcript of nucleobindin 1, humanhuman

TSL 2

Gene NUCB1, Length 528 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-208ENST00000460125 RRP7BPQ9NSQ0 103 aa17.34■□□□□ 0.37
NUCB1-208ENST00000460125 NCOA3Q9Y6Q9 1424 aa17.34■□□□□ 0.37
NUCB1-208ENST00000460125 ADGRB3O60242 1522 aa17.31■□□□□ 0.36
NUCB1-208ENST00000460125 LMTK2Q8IWU2 1503 aa17.31■□□□□ 0.36
NUCB1-208ENST00000460125 NOS1P29475 1434 aa17.31■□□□□ 0.36
NUCB1-208ENST00000460125 SLC52A1Q9NWF4 448 aa17.31■□□□□ 0.36
NUCB1-208ENST00000460125 SHPRHQ149N8 1683 aa17.31■□□□□ 0.36
NUCB1-208ENST00000460125 AHDC1Q5TGY3 1603 aaPredicted RBP17.31■□□□□ 0.36
NUCB1-208ENST00000460125 CADPS2Q86UW7 1296 aa17.3■□□□□ 0.36
NUCB1-208ENST00000460125 CHD2O14647 1828 aaKnown RBP17.3■□□□□ 0.36
NUCB1-208ENST00000460125 PLEKHG1Q9ULL1 1385 aa17.29■□□□□ 0.36
NUCB1-208ENST00000460125 TBX22Q9Y458 520 aa17.29■□□□□ 0.36
NUCB1-208ENST00000460125 C19orf44Q9H6X5 657 aa17.28■□□□□ 0.36
NUCB1-208ENST00000460125 ABCC5O15440 1437 aa17.28■□□□□ 0.36
NUCB1-208ENST00000460125 ZFYVE9O95405 1425 aa17.28■□□□□ 0.36
NUCB1-208ENST00000460125 AFF2P51816 1311 aa17.27■□□□□ 0.36
NUCB1-208ENST00000460125 NUTM2BA6NNL0 878 aaPredicted RBP17.27■□□□□ 0.36
NUCB1-208ENST00000460125 NUTM2EB1AL46 878 aaPredicted RBP17.27■□□□□ 0.36
NUCB1-208ENST00000460125 C14orf37Q86TY3 774 aa17.27■□□□□ 0.36
NUCB1-208ENST00000460125 NUTM2AQ8IVF1 878 aaPredicted RBP17.27■□□□□ 0.36
NUCB1-208ENST00000460125 SRCAPQ6ZRS2 3230 aa17.26■□□□□ 0.35
NUCB1-208ENST00000460125 ATF3P18847 181 aa17.26■□□□□ 0.35
NUCB1-208ENST00000460125 HDGFP51858 240 aaKnown RBP17.26■□□□□ 0.35
NUCB1-208ENST00000460125 KANK4Q5T7N3 995 aaPredicted RBP17.26■□□□□ 0.35
NUCB1-208ENST00000460125 DIP2AQ14689 1571 aa17.25■□□□□ 0.35
NUCB1-208ENST00000460125 RIMS2Q9UQ26 1411 aa17.24■□□□□ 0.35
NUCB1-208ENST00000460125 PPP1R15AO75807 674 aaPredicted RBP17.24■□□□□ 0.35
NUCB1-208ENST00000460125 BRINP3Q76B58 766 aa17.24■□□□□ 0.35
NUCB1-208ENST00000460125 RBM6P78332 1123 aaKnown RBP17.23■□□□□ 0.35
NUCB1-208ENST00000460125 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.23■□□□□ 0.35
NUCB1-208ENST00000460125 RGS12O14924 1447 aa17.22■□□□□ 0.35
NUCB1-208ENST00000460125 QTRT2Q9H974 415 aaKnown RBP17.22■□□□□ 0.35
NUCB1-208ENST00000460125 SETD5Q9C0A6 1442 aa17.21■□□□□ 0.34
NUCB1-208ENST00000460125 CROCC2H7BZ55 1655 aa17.2■□□□□ 0.34
NUCB1-208ENST00000460125 PIK3R4Q99570 1358 aa17.2■□□□□ 0.34
NUCB1-208ENST00000460125 DAPK1P53355 1430 aa17.2■□□□□ 0.34
NUCB1-208ENST00000460125 ADAMTS13Q76LX8 1427 aa17.2■□□□□ 0.34
NUCB1-208ENST00000460125 NUTM2DQ5VT03 806 aaPredicted RBP17.19■□□□□ 0.34
NUCB1-208ENST00000460125 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.19■□□□□ 0.34
NUCB1-208ENST00000460125 VPS8Q8N3P4 1428 aa17.18■□□□□ 0.34
NUCB1-208ENST00000460125 RPRD2Q5VT52 1461 aaKnown RBP17.18■□□□□ 0.34
NUCB1-208ENST00000460125 ANKRD30AQ9BXX3 1397 aa17.17■□□□□ 0.34
NUCB1-208ENST00000460125 LRRC59Q96AG4 307 aaKnown RBP17.17■□□□□ 0.34
NUCB1-208ENST00000460125 C8orf37Q96NL8 207 aa17.17■□□□□ 0.34
NUCB1-208ENST00000460125 CHIC2Q9UKJ5 165 aa17.17■□□□□ 0.34
NUCB1-208ENST00000460125 TMEM131LA2VDJ0 1609 aa17.16■□□□□ 0.34
NUCB1-208ENST00000460125 AMOTL2Q9Y2J4 779 aa17.15■□□□□ 0.34
NUCB1-208ENST00000460125 ASXL1Q8IXJ9 1541 aa17.15■□□□□ 0.34
NUCB1-208ENST00000460125 MYO5BQ9ULV0 1848 aa17.14■□□□□ 0.34
NUCB1-208ENST00000460125 PTPN23Q9H3S7 1636 aa17.14■□□□□ 0.33
NUCB1-208ENST00000460125 DCCP43146 1447 aa17.14■□□□□ 0.33
NUCB1-208ENST00000460125 FOXD1Q16676 465 aa17.14■□□□□ 0.33
NUCB1-208ENST00000460125 NGLY1Q96IV0 654 aa17.14■□□□□ 0.33
NUCB1-208ENST00000460125 ZRANB1Q9UGI0 708 aa17.14■□□□□ 0.33
NUCB1-208ENST00000460125 ATAD2Q6PL18 1390 aa17.14■□□□□ 0.33
NUCB1-208ENST00000460125 GCC2Q8IWJ2 1684 aa17.13■□□□□ 0.33
NUCB1-208ENST00000460125 PTPRUQ92729 1446 aa17.13■□□□□ 0.33
NUCB1-208ENST00000460125 CHGAP10645 457 aaKnown RBP17.12■□□□□ 0.33
NUCB1-208ENST00000460125 PNPLA6Q8IY17 1366 aa17.12■□□□□ 0.33
NUCB1-208ENST00000460125 MST1RQ04912 1400 aa17.12■□□□□ 0.33
NUCB1-208ENST00000460125 NHSL1Q5SYE7 1610 aa17.1■□□□□ 0.33
NUCB1-208ENST00000460125 DDX17Q92841 729 aaKnown RBP17.09■□□□□ 0.33
NUCB1-208ENST00000460125 TRPM2O94759 1503 aa17.09■□□□□ 0.33
NUCB1-208ENST00000460125 SETBP1Q9Y6X0 1596 aa17.07■□□□□ 0.32
NUCB1-208ENST00000460125 ADAMTS2O95450 1211 aa17.07■□□□□ 0.32
NUCB1-208ENST00000460125 ADGRL2O95490 1459 aa17.05■□□□□ 0.32
NUCB1-208ENST00000460125 USP21Q9UK80 565 aa17.05■□□□□ 0.32
NUCB1-208ENST00000460125 TRPC5Q9UL62 973 aaPredicted RBP17.05■□□□□ 0.32
NUCB1-208ENST00000460125 ANKRD50Q9ULJ7 1429 aa17.04■□□□□ 0.32
NUCB1-208ENST00000460125 CCDC125Q86Z20 511 aa17.04■□□□□ 0.32
NUCB1-208ENST00000460125 FNBP4Q8N3X1 1017 aaPredicted RBP17.04■□□□□ 0.32
NUCB1-208ENST00000460125 UNC13BO14795 1591 aa17.02■□□□□ 0.32
NUCB1-208ENST00000460125 XRN1Q8IZH2 1706 aaKnown RBP17.01■□□□□ 0.31
NUCB1-208ENST00000460125 ATRNO75882 1429 aa17■□□□□ 0.31
NUCB1-208ENST00000460125 ADGRL3Q9HAR2 1447 aa17■□□□□ 0.31
NUCB1-208ENST00000460125 PTCH1Q13635 1447 aa16.99■□□□□ 0.31
NUCB1-208ENST00000460125 SOS2Q07890 1332 aaPredicted RBP16.98■□□□□ 0.31
NUCB1-208ENST00000460125 METP08581 1390 aa16.98■□□□□ 0.31
NUCB1-208ENST00000460125 NRXN3Q9Y4C0 1643 aa16.97■□□□□ 0.31
NUCB1-208ENST00000460125 C1orf167Q5SNV9 1468 aa16.97■□□□□ 0.31
NUCB1-208ENST00000460125 E9PCH4 1651 aa16.96■□□□□ 0.31
NUCB1-208ENST00000460125 LAMC1P11047 1609 aa16.96■□□□□ 0.3
NUCB1-208ENST00000460125 EP400Q96L91 3159 aa16.95■□□□□ 0.3
NUCB1-208ENST00000460125 APLP2Q06481 763 aa16.95■□□□□ 0.3
NUCB1-208ENST00000460125 ORAI2Q96SN7 254 aa16.94■□□□□ 0.3
NUCB1-208ENST00000460125 LOC105371045A0A1W2PR82 267 aa16.93■□□□□ 0.3
NUCB1-208ENST00000460125 BCL9LQ86UU0 1499 aa16.93■□□□□ 0.3
NUCB1-208ENST00000460125 NALCNQ8IZF0 1738 aa16.92■□□□□ 0.3
NUCB1-208ENST00000460125 FAM50AQ14320 339 aaKnown RBP16.91■□□□□ 0.3
NUCB1-208ENST00000460125 GJD4Q96KN9 370 aaPredicted RBP16.91■□□□□ 0.3
NUCB1-208ENST00000460125 BLMP54132 1417 aaPredicted RBP16.89■□□□□ 0.29
NUCB1-208ENST00000460125 COL22A1Q8NFW1 1626 aaPredicted RBP16.88■□□□□ 0.29
NUCB1-208ENST00000460125 MYOM2P54296 1465 aa16.88■□□□□ 0.29
NUCB1-208ENST00000460125 ZNF326Q5BKZ1 582 aaKnown RBP16.88■□□□□ 0.29
NUCB1-208ENST00000460125 IQGAP3Q86VI3 1631 aa16.88■□□□□ 0.29
NUCB1-208ENST00000460125 DEFB132Q7Z7B7 95 aa16.87■□□□□ 0.29
NUCB1-208ENST00000460125 NUP155O75694 1391 aa16.86■□□□□ 0.29
NUCB1-208ENST00000460125 LRP5O75197 1615 aa16.85■□□□□ 0.29
NUCB1-208ENST00000460125 ROBO2Q9HCK4 1378 aa16.83■□□□□ 0.28
NUCB1-208ENST00000460125 NPHP3Q7Z494 1330 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms