RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 FBXO31Q5XUX0 539 aaPredicted RBP8.11□□□□□ -1.11
RNU1-88P-201ENST00000459274 THEMISQ8N1K5 641 aaPredicted RBP8.11□□□□□ -1.11
RNU1-88P-201ENST00000459274 NOS1P29475 1434 aa8.11□□□□□ -1.11
RNU1-88P-201ENST00000459274 POLR3GLQ9BT43 218 aa8.1□□□□□ -1.11
RNU1-88P-201ENST00000459274 ERVK-7P63135 1459 aa8.1□□□□□ -1.11
RNU1-88P-201ENST00000459274 PLA2R1Q13018 1463 aa8.1□□□□□ -1.11
RNU1-88P-201ENST00000459274 UHRF1BP1Q6BDS2 1440 aa8.1□□□□□ -1.11
RNU1-88P-201ENST00000459274 PPLO60437 1756 aa8.1□□□□□ -1.11
RNU1-88P-201ENST00000459274 MYO5BQ9ULV0 1848 aa8.09□□□□□ -1.11
RNU1-88P-201ENST00000459274 HSPA5P11021 654 aaKnown RBP8.09□□□□□ -1.11
RNU1-88P-201ENST00000459274 KIAA1210Q9ULL0 1709 aa8.09□□□□□ -1.11
RNU1-88P-201ENST00000459274 RIMS1Q86UR5 1692 aaKnown RBP8.08□□□□□ -1.12
RNU1-88P-201ENST00000459274 NLRP1Q9C000 1473 aa8.08□□□□□ -1.12
RNU1-88P-201ENST00000459274 PIK3C2BO00750 1634 aa8.08□□□□□ -1.12
RNU1-88P-201ENST00000459274 TMF1P82094 1093 aa8.08□□□□□ -1.12
RNU1-88P-201ENST00000459274 NBPF8Q3BBV2 869 aa8.08□□□□□ -1.12
RNU1-88P-201ENST00000459274 SPATA31E1Q6ZUB1 1445 aa8.08□□□□□ -1.12
RNU1-88P-201ENST00000459274 PRAG1Q86YV5 1406 aa8.08□□□□□ -1.12
RNU1-88P-201ENST00000459274 SPATA31D1Q6ZQQ2 1576 aa8.08□□□□□ -1.12
RNU1-88P-201ENST00000459274 SIGLEC1Q9BZZ2 1709 aa8.08□□□□□ -1.12
RNU1-88P-201ENST00000459274 USP47Q96K76 1375 aa8.08□□□□□ -1.12
RNU1-88P-201ENST00000459274 C3P01024 1663 aa8.08□□□□□ -1.12
RNU1-88P-201ENST00000459274 KDM5AP29375 1690 aaKnown RBP8.08□□□□□ -1.12
RNU1-88P-201ENST00000459274 LAMC1P11047 1609 aa8.07□□□□□ -1.12
RNU1-88P-201ENST00000459274 TRPM1Q7Z4N2 1603 aa8.07□□□□□ -1.12
RNU1-88P-201ENST00000459274 MYOM2P54296 1465 aa8.07□□□□□ -1.12
RNU1-88P-201ENST00000459274 RALGAPBQ86X10 1494 aa8.07□□□□□ -1.12
RNU1-88P-201ENST00000459274 IFT172Q9UG01 1749 aa8.06□□□□□ -1.12
RNU1-88P-201ENST00000459274 SYNMO15061 1565 aa8.06□□□□□ -1.12
RNU1-88P-201ENST00000459274 UGGT1Q9NYU2 1555 aa8.06□□□□□ -1.12
RNU1-88P-201ENST00000459274 ANP32CO43423 234 aa8.06□□□□□ -1.12
RNU1-88P-201ENST00000459274 CEBPAP49715 358 aaPredicted RBP8.06□□□□□ -1.12
RNU1-88P-201ENST00000459274 HIRIP3Q9BW71 556 aaPredicted RBP8.06□□□□□ -1.12
RNU1-88P-201ENST00000459274 ADGRB3O60242 1522 aa8.06□□□□□ -1.12
RNU1-88P-201ENST00000459274 POLR1AO95602 1720 aaPredicted RBP8.06□□□□□ -1.12
RNU1-88P-201ENST00000459274 TMEM131LA2VDJ0 1609 aa8.05□□□□□ -1.12
RNU1-88P-201ENST00000459274 DDX10Q13206 875 aaKnown RBP8.05□□□□□ -1.12
RNU1-88P-201ENST00000459274 NUTM2DQ5VT03 806 aaPredicted RBP8.05□□□□□ -1.12
RNU1-88P-201ENST00000459274 POGKQ9P215 609 aa8.05□□□□□ -1.12
RNU1-88P-201ENST00000459274 MADDQ8WXG6 1647 aa8.04□□□□□ -1.12
RNU1-88P-201ENST00000459274 ST20-MTHFSA0A0A6YYL1 179 aa8.04□□□□□ -1.12
RNU1-88P-201ENST00000459274 CFAP70Q5T0N1 1121 aa8.04□□□□□ -1.12
RNU1-88P-201ENST00000459274 TXNDC2Q86VQ3 553 aa8.04□□□□□ -1.12
RNU1-88P-201ENST00000459274 ANKLE2Q86XL3 938 aa8.04□□□□□ -1.12
RNU1-88P-201ENST00000459274 C14orf93Q9H972 538 aaKnown RBP8.04□□□□□ -1.12
RNU1-88P-201ENST00000459274 ADGRF5Q8IZF2 1346 aa8.03□□□□□ -1.12
RNU1-88P-201ENST00000459274 ZFYVE9O95405 1425 aa8.03□□□□□ -1.12
RNU1-88P-201ENST00000459274 RIMS2Q9UQ26 1411 aa8.03□□□□□ -1.12
RNU1-88P-201ENST00000459274 NBPF1Q3BBV0 1214 aa8.03□□□□□ -1.12
RNU1-88P-201ENST00000459274 ADAMTSL3P82987 1691 aa8.02□□□□□ -1.13
RNU1-88P-201ENST00000459274 SCAF11Q99590 1463 aaKnown RBP8.02□□□□□ -1.13
RNU1-88P-201ENST00000459274 LHX8Q68G74 356 aa8.02□□□□□ -1.13
RNU1-88P-201ENST00000459274 TRAK1Q9UPV9 953 aa8.02□□□□□ -1.13
RNU1-88P-201ENST00000459274 UBR1Q8IWV7 1749 aa8.02□□□□□ -1.13
RNU1-88P-201ENST00000459274 SETBP1Q9Y6X0 1596 aa8.01□□□□□ -1.13
RNU1-88P-201ENST00000459274 A2ML1A8K2U0 1454 aa8.01□□□□□ -1.13
RNU1-88P-201ENST00000459274 STK26Q9P289 416 aa8.01□□□□□ -1.13
RNU1-88P-201ENST00000459274 NEXMIFQ5QGS0 1516 aa8.01□□□□□ -1.13
RNU1-88P-201ENST00000459274 CENPJQ9HC77 1338 aaPredicted RBP8.01□□□□□ -1.13
RNU1-88P-201ENST00000459274 GPRASP1Q5JY77 1395 aa8□□□□□ -1.13
RNU1-88P-201ENST00000459274 TMEM2Q9UHN6 1383 aa8□□□□□ -1.13
RNU1-88P-201ENST00000459274 PIK3C2GO75747 1445 aa8□□□□□ -1.13
RNU1-88P-201ENST00000459274 EVC2Q86UK5 1308 aa8□□□□□ -1.13
RNU1-88P-201ENST00000459274 MYO3AQ8NEV4 1616 aa8□□□□□ -1.13
RNU1-88P-201ENST00000459274 TMEM132EQ6IEE7 984 aa7.99□□□□□ -1.13
RNU1-88P-201ENST00000459274 IQGAP1P46940 1657 aa7.98□□□□□ -1.13
RNU1-88P-201ENST00000459274 CEP170BQ9Y4F5 1589 aaPredicted RBP7.98□□□□□ -1.13
RNU1-88P-201ENST00000459274 PTPRMP28827 1452 aa7.98□□□□□ -1.13
RNU1-88P-201ENST00000459274 NRXN1Q9ULB1 1477 aa7.98□□□□□ -1.13
RNU1-88P-201ENST00000459274 CCDC7Q96M83 1385 aa7.97□□□□□ -1.13
RNU1-88P-201ENST00000459274 ALKQ9UM73 1620 aa7.97□□□□□ -1.13
RNU1-88P-201ENST00000459274 SRPK2P78362 688 aaKnown RBP7.97□□□□□ -1.13
RNU1-88P-201ENST00000459274 KNSTRNQ9Y448 316 aa7.97□□□□□ -1.13
RNU1-88P-201ENST00000459274 PLEKHG1Q9ULL1 1385 aa7.97□□□□□ -1.13
RNU1-88P-201ENST00000459274 ZNF142P52746 1687 aaPredicted RBP7.96□□□□□ -1.13
RNU1-88P-201ENST00000459274 TMC1Q8TDI8 760 aa7.96□□□□□ -1.14
RNU1-88P-201ENST00000459274 TBX22Q9Y458 520 aa7.96□□□□□ -1.14
RNU1-88P-201ENST00000459274 KIF7Q2M1P5 1343 aa7.96□□□□□ -1.14
RNU1-88P-201ENST00000459274 QRICH2Q9H0J4 1663 aa7.95□□□□□ -1.14
RNU1-88P-201ENST00000459274 SAFB2Q14151 953 aaKnown RBP eCLIP7.95□□□□□ -1.14
RNU1-88P-201ENST00000459274 C14orf37Q86TY3 774 aa7.95□□□□□ -1.14
RNU1-88P-201ENST00000459274 PUS7Q96PZ0 661 aaKnown RBP7.95□□□□□ -1.14
RNU1-88P-201ENST00000459274 WASHC2AQ641Q2 1341 aa7.95□□□□□ -1.14
RNU1-88P-201ENST00000459274 YTHDC2Q9H6S0 1430 aaKnown RBP7.95□□□□□ -1.14
RNU1-88P-201ENST00000459274 SLIT1O75093 1534 aa7.94□□□□□ -1.14
RNU1-88P-201ENST00000459274 DIP2AQ14689 1571 aa7.94□□□□□ -1.14
RNU1-88P-201ENST00000459274 SIRT1Q96EB6 747 aa7.94□□□□□ -1.14
RNU1-88P-201ENST00000459274 PRAM1Q96QH2 718 aa7.94□□□□□ -1.14
RNU1-88P-201ENST00000459274 SLC26A8Q96RN1 970 aa7.94□□□□□ -1.14
RNU1-88P-201ENST00000459274 TERF2IPQ9NYB0 399 aa7.94□□□□□ -1.14
RNU1-88P-201ENST00000459274 HDGFL2Q7Z4V5 671 aaPredicted RBP7.93□□□□□ -1.14
RNU1-88P-201ENST00000459274 LRPPRCP42704 1394 aaKnown RBP7.93□□□□□ -1.14
RNU1-88P-201ENST00000459274 KTN1Q86UP2 1357 aaKnown RBP7.93□□□□□ -1.14
RNU1-88P-201ENST00000459274 ABCC11Q96J66 1382 aa7.93□□□□□ -1.14
RNU1-88P-201ENST00000459274 SBNO2Q9Y2G9 1366 aa7.93□□□□□ -1.14
RNU1-88P-201ENST00000459274 ARHGEF28Q8N1W1 1705 aaKnown RBP7.92□□□□□ -1.14
RNU1-88P-201ENST00000459274 CENPBP07199 599 aaPredicted RBP7.92□□□□□ -1.14
RNU1-88P-201ENST00000459274 LTKP29376 864 aa7.92□□□□□ -1.14
RNU1-88P-201ENST00000459274 CNGB1Q14028 1251 aaPredicted RBP7.92□□□□□ -1.14
RNU1-88P-201ENST00000459274 MIER1Q8N108 512 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms