RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 NLRP1Q9C000 1473 aa12.58□□□□□ -0.4
CLTCL1-204ENST00000458188 LTKP29376 864 aa12.57□□□□□ -0.4
CLTCL1-204ENST00000458188 DCAF11Q8TEB1 546 aa12.57□□□□□ -0.4
CLTCL1-204ENST00000458188 L3MBTL2Q969R5 705 aa12.57□□□□□ -0.4
CLTCL1-204ENST00000458188 A2ML1A8K2U0 1454 aa12.57□□□□□ -0.4
CLTCL1-204ENST00000458188 TXNDC2Q86VQ3 553 aa12.56□□□□□ -0.4
CLTCL1-204ENST00000458188 SPHKAPQ2M3C7 1700 aa12.56□□□□□ -0.4
CLTCL1-204ENST00000458188 PIK3C2BO00750 1634 aa12.55□□□□□ -0.4
CLTCL1-204ENST00000458188 PPP1R15AO75807 674 aaPredicted RBP12.55□□□□□ -0.4
CLTCL1-204ENST00000458188 BCANQ96GW7 911 aa12.55□□□□□ -0.4
CLTCL1-204ENST00000458188 MYO3AQ8NEV4 1616 aa12.55□□□□□ -0.4
CLTCL1-204ENST00000458188 CEP170BQ9Y4F5 1589 aaPredicted RBP12.54□□□□□ -0.4
CLTCL1-204ENST00000458188 TMEM2Q9UHN6 1383 aa12.54□□□□□ -0.4
CLTCL1-204ENST00000458188 SPATA31E1Q6ZUB1 1445 aa12.54□□□□□ -0.4
CLTCL1-204ENST00000458188 ANKLE2Q86XL3 938 aa12.53□□□□□ -0.4
CLTCL1-204ENST00000458188 EID1Q9Y6B2 187 aa12.53□□□□□ -0.4
CLTCL1-204ENST00000458188 RIMS2Q9UQ26 1411 aa12.53□□□□□ -0.4
CLTCL1-204ENST00000458188 ADGRF5Q8IZF2 1346 aa12.52□□□□□ -0.41
CLTCL1-204ENST00000458188 CLSPNQ9HAW4 1339 aa12.52□□□□□ -0.41
CLTCL1-204ENST00000458188 TONSLQ96HA7 1378 aa12.52□□□□□ -0.41
CLTCL1-204ENST00000458188 ADGRB3O60242 1522 aa12.52□□□□□ -0.41
CLTCL1-204ENST00000458188 TMEM131LA2VDJ0 1609 aa12.51□□□□□ -0.41
CLTCL1-204ENST00000458188 HDGFP51858 240 aaKnown RBP12.5□□□□□ -0.41
CLTCL1-204ENST00000458188 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.5□□□□□ -0.41
CLTCL1-204ENST00000458188 SLC26A8Q96RN1 970 aa12.5□□□□□ -0.41
CLTCL1-204ENST00000458188 RPGRIP1LQ68CZ1 1315 aa12.5□□□□□ -0.41
CLTCL1-204ENST00000458188 VGFO15240 615 aaPredicted RBP12.49□□□□□ -0.41
CLTCL1-204ENST00000458188 UBR1Q8IWV7 1749 aa12.48□□□□□ -0.41
CLTCL1-204ENST00000458188 ZFYVE9O95405 1425 aa12.47□□□□□ -0.41
CLTCL1-204ENST00000458188 NBPF8Q3BBV2 869 aa12.47□□□□□ -0.41
CLTCL1-204ENST00000458188 CFAP70Q5T0N1 1121 aa12.47□□□□□ -0.41
CLTCL1-204ENST00000458188 ARHGAP23Q9P227 1491 aa12.46□□□□□ -0.41
CLTCL1-204ENST00000458188 TMEM132EQ6IEE7 984 aa12.45□□□□□ -0.42
CLTCL1-204ENST00000458188 NEXMIFQ5QGS0 1516 aa12.45□□□□□ -0.42
CLTCL1-204ENST00000458188 SCAF11Q99590 1463 aaKnown RBP12.45□□□□□ -0.42
CLTCL1-204ENST00000458188 SLIT1O75093 1534 aa12.44□□□□□ -0.42
CLTCL1-204ENST00000458188 NBPF1Q3BBV0 1214 aa12.44□□□□□ -0.42
CLTCL1-204ENST00000458188 ZNF142P52746 1687 aaPredicted RBP12.44□□□□□ -0.42
CLTCL1-204ENST00000458188 KIF1BO60333 1816 aa12.44□□□□□ -0.42
CLTCL1-204ENST00000458188 CPS1P31327 1500 aa12.43□□□□□ -0.42
CLTCL1-204ENST00000458188 MYO5BQ9ULV0 1848 aa12.43□□□□□ -0.42
CLTCL1-204ENST00000458188 NPHP4O75161 1426 aaPredicted RBP12.43□□□□□ -0.42
CLTCL1-204ENST00000458188 PLEKHG1Q9ULL1 1385 aa12.43□□□□□ -0.42
CLTCL1-204ENST00000458188 TIMELESSQ9UNS1 1208 aa12.42□□□□□ -0.42
CLTCL1-204ENST00000458188 C14orf93Q9H972 538 aaKnown RBP12.41□□□□□ -0.42
CLTCL1-204ENST00000458188 STK26Q9P289 416 aa12.41□□□□□ -0.42
CLTCL1-204ENST00000458188 METP08581 1390 aa12.4□□□□□ -0.42
CLTCL1-204ENST00000458188 NEURL4Q96JN8 1562 aa12.39□□□□□ -0.43
CLTCL1-204ENST00000458188 ADAMTS13Q76LX8 1427 aa12.39□□□□□ -0.43
CLTCL1-204ENST00000458188 PRAG1Q86YV5 1406 aa12.39□□□□□ -0.43
CLTCL1-204ENST00000458188 RBM33Q96EV2 1170 aaKnown RBP12.39□□□□□ -0.43
CLTCL1-204ENST00000458188 STAC3Q96MF2 364 aa12.39□□□□□ -0.43
CLTCL1-204ENST00000458188 TBX22Q9Y458 520 aa12.39□□□□□ -0.43
CLTCL1-204ENST00000458188 PIK3C2GO75747 1445 aa12.38□□□□□ -0.43
CLTCL1-204ENST00000458188 MYOM2P54296 1465 aa12.38□□□□□ -0.43
CLTCL1-204ENST00000458188 KDM5AP29375 1690 aaKnown RBP12.38□□□□□ -0.43
CLTCL1-204ENST00000458188 TRAK1Q9UPV9 953 aa12.37□□□□□ -0.43
CLTCL1-204ENST00000458188 AMOTL2Q9Y2J4 779 aa12.37□□□□□ -0.43
CLTCL1-204ENST00000458188 MED14O60244 1454 aa12.36□□□□□ -0.43
CLTCL1-204ENST00000458188 NRXN1Q9ULB1 1477 aa12.36□□□□□ -0.43
CLTCL1-204ENST00000458188 PPLO60437 1756 aa12.35□□□□□ -0.43
CLTCL1-204ENST00000458188 POLR1AO95602 1720 aaPredicted RBP12.35□□□□□ -0.43
CLTCL1-204ENST00000458188 CARD11Q9BXL7 1154 aa12.35□□□□□ -0.43
CLTCL1-204ENST00000458188 RGS17Q9UGC6 210 aaPredicted RBP12.35□□□□□ -0.43
CLTCL1-204ENST00000458188 ROCK2O75116 1388 aaKnown RBP12.34□□□□□ -0.43
CLTCL1-204ENST00000458188 ALKQ9UM73 1620 aa12.34□□□□□ -0.43
CLTCL1-204ENST00000458188 KCNA6P17658 529 aa12.34□□□□□ -0.43
CLTCL1-204ENST00000458188 PTPRUQ92729 1446 aa12.34□□□□□ -0.43
CLTCL1-204ENST00000458188 ZEB1P37275 1124 aaPredicted RBP12.33□□□□□ -0.44
CLTCL1-204ENST00000458188 SAFB2Q14151 953 aaKnown RBP eCLIP12.33□□□□□ -0.44
CLTCL1-204ENST00000458188 WAPLQ7Z5K2 1190 aa12.33□□□□□ -0.44
CLTCL1-204ENST00000458188 IFT172Q9UG01 1749 aa12.32□□□□□ -0.44
CLTCL1-204ENST00000458188 SETBP1Q9Y6X0 1596 aa12.32□□□□□ -0.44
CLTCL1-204ENST00000458188 HIRIP3Q9BW71 556 aaPredicted RBP12.32□□□□□ -0.44
CLTCL1-204ENST00000458188 NRXN3Q9Y4C0 1643 aa12.32□□□□□ -0.44
CLTCL1-204ENST00000458188 PROSER2Q86WR7 435 aaPredicted RBP12.31□□□□□ -0.44
CLTCL1-204ENST00000458188 IQGAP1P46940 1657 aa12.31□□□□□ -0.44
CLTCL1-204ENST00000458188 PRAM1Q96QH2 718 aa12.3□□□□□ -0.44
CLTCL1-204ENST00000458188 PLEKHH1Q9ULM0 1364 aa12.3□□□□□ -0.44
CLTCL1-204ENST00000458188 YTHDC2Q9H6S0 1430 aaKnown RBP12.29□□□□□ -0.44
CLTCL1-204ENST00000458188 ASXL1Q8IXJ9 1541 aa12.29□□□□□ -0.44
CLTCL1-204ENST00000458188 POGKQ9P215 609 aa12.29□□□□□ -0.44
CLTCL1-204ENST00000458188 LRPPRCP42704 1394 aaKnown RBP12.29□□□□□ -0.44
CLTCL1-204ENST00000458188 ROBO2Q9HCK4 1378 aa12.29□□□□□ -0.44
CLTCL1-204ENST00000458188 POTEAQ6S8J7 498 aa12.28□□□□□ -0.44
CLTCL1-204ENST00000458188 ADGRB1O14514 1584 aa12.27□□□□□ -0.44
CLTCL1-204ENST00000458188 C14orf37Q86TY3 774 aa12.27□□□□□ -0.45
CLTCL1-204ENST00000458188 ABCC11Q96J66 1382 aa12.27□□□□□ -0.45
CLTCL1-204ENST00000458188 RALGAPBQ86X10 1494 aa12.27□□□□□ -0.45
CLTCL1-204ENST00000458188 ST20-MTHFSA0A0A6YYL1 179 aa12.26□□□□□ -0.45
CLTCL1-204ENST00000458188 HSPA5P11021 654 aaKnown RBP12.26□□□□□ -0.45
CLTCL1-204ENST00000458188 MINK1Q8N4C8 1332 aaPredicted RBP12.26□□□□□ -0.45
CLTCL1-204ENST00000458188 PIK3R4Q99570 1358 aa12.26□□□□□ -0.45
CLTCL1-204ENST00000458188 GPRASP1Q5JY77 1395 aa12.25□□□□□ -0.45
CLTCL1-204ENST00000458188 TMEM94Q12767 1356 aa12.24□□□□□ -0.45
CLTCL1-204ENST00000458188 DIP2AQ14689 1571 aa12.24□□□□□ -0.45
CLTCL1-204ENST00000458188 TRPM1Q7Z4N2 1603 aa12.24□□□□□ -0.45
CLTCL1-204ENST00000458188 LRRC7Q96NW7 1537 aa12.24□□□□□ -0.45
CLTCL1-204ENST00000458188 USP47Q96K76 1375 aa12.23□□□□□ -0.45
CLTCL1-204ENST00000458188 NUTM2FA1L443 756 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms