RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 CFAP74Q9C0B2 1584 aa16.71■□□□□ 0.27
LINC00959-201ENST00000456581 HECW2Q9P2P5 1572 aa16.71■□□□□ 0.27
LINC00959-201ENST00000456581 NUDCQ9Y266 331 aa16.7■□□□□ 0.26
LINC00959-201ENST00000456581 EFCAB6Q5THR3 1501 aa16.7■□□□□ 0.26
LINC00959-201ENST00000456581 CCDC136Q96JN2 1154 aa16.7■□□□□ 0.26
LINC00959-201ENST00000456581 YEATS2Q9ULM3 1422 aa16.7■□□□□ 0.26
LINC00959-201ENST00000456581 SKAP1Q86WV1 359 aa16.69■□□□□ 0.26
LINC00959-201ENST00000456581 TMC1Q8TDI8 760 aa16.69■□□□□ 0.26
LINC00959-201ENST00000456581 NUTM2DQ5VT03 806 aaPredicted RBP16.69■□□□□ 0.26
LINC00959-201ENST00000456581 NPATQ14207 1427 aa16.69■□□□□ 0.26
LINC00959-201ENST00000456581 CC2D1BQ5T0F9 858 aaKnown RBP16.68■□□□□ 0.26
LINC00959-201ENST00000456581 PNISRQ8TF01 805 aaKnown RBP16.68■□□□□ 0.26
LINC00959-201ENST00000456581 PANK3Q9H999 370 aa16.68■□□□□ 0.26
LINC00959-201ENST00000456581 SMG6Q86US8 1419 aaKnown RBP16.68■□□□□ 0.26
LINC00959-201ENST00000456581 COL17A1Q9UMD9 1497 aaPredicted RBP16.67■□□□□ 0.26
LINC00959-201ENST00000456581 PER1O15534 1290 aaPredicted RBP16.67■□□□□ 0.26
LINC00959-201ENST00000456581 NEO1Q92859 1461 aa16.67■□□□□ 0.26
LINC00959-201ENST00000456581 RNF17Q9BXT8 1623 aaKnown RBP16.66■□□□□ 0.26
LINC00959-201ENST00000456581 TMF1P82094 1093 aa16.66■□□□□ 0.26
LINC00959-201ENST00000456581 TSPOAP1O95153 1857 aa16.66■□□□□ 0.26
LINC00959-201ENST00000456581 MROH2AA6NES4 1674 aa16.65■□□□□ 0.26
LINC00959-201ENST00000456581 NOP58Q9Y2X3 529 aaKnown RBP16.65■□□□□ 0.26
LINC00959-201ENST00000456581 LAMC1P11047 1609 aa16.64■□□□□ 0.25
LINC00959-201ENST00000456581 DIP2CQ9Y2E4 1556 aa16.63■□□□□ 0.25
LINC00959-201ENST00000456581 NOS1P29475 1434 aa16.63■□□□□ 0.25
LINC00959-201ENST00000456581 KIF1BO60333 1816 aa16.62■□□□□ 0.25
LINC00959-201ENST00000456581 RICTORQ6R327 1708 aa16.62■□□□□ 0.25
LINC00959-201ENST00000456581 NPM2Q86SE8 214 aaKnown RBP16.62■□□□□ 0.25
LINC00959-201ENST00000456581 ABCC3O15438 1527 aa16.61■□□□□ 0.25
LINC00959-201ENST00000456581 LMTK2Q8IWU2 1503 aa16.61■□□□□ 0.25
LINC00959-201ENST00000456581 TMEM132EQ6IEE7 984 aa16.6■□□□□ 0.25
LINC00959-201ENST00000456581 MYBBP1AQ9BQG0 1328 aaKnown RBP16.6■□□□□ 0.25
LINC00959-201ENST00000456581 SCAF11Q99590 1463 aaKnown RBP16.6■□□□□ 0.25
LINC00959-201ENST00000456581 IQGAP1P46940 1657 aa16.6■□□□□ 0.25
LINC00959-201ENST00000456581 EXOC6Q8TAG9 804 aa16.59■□□□□ 0.25
LINC00959-201ENST00000456581 SIGLEC1Q9BZZ2 1709 aa16.59■□□□□ 0.25
LINC00959-201ENST00000456581 RALBP1Q15311 655 aa16.59■□□□□ 0.25
LINC00959-201ENST00000456581 KTN1Q86UP2 1357 aaKnown RBP16.59■□□□□ 0.25
LINC00959-201ENST00000456581 RNF123Q5XPI4 1314 aa16.58■□□□□ 0.24
LINC00959-201ENST00000456581 TRAK1Q9UPV9 953 aa16.57■□□□□ 0.24
LINC00959-201ENST00000456581 CDCA7LQ96GN5 454 aa16.57■□□□□ 0.24
LINC00959-201ENST00000456581 PARD3Q8TEW0 1356 aa16.56■□□□□ 0.24
LINC00959-201ENST00000456581 FBXO31Q5XUX0 539 aaPredicted RBP16.56■□□□□ 0.24
LINC00959-201ENST00000456581 STAC3Q96MF2 364 aa16.56■□□□□ 0.24
LINC00959-201ENST00000456581 IDI1Q13907 227 aa16.56■□□□□ 0.24
LINC00959-201ENST00000456581 PLIN1O60240 522 aa16.55■□□□□ 0.24
LINC00959-201ENST00000456581 ADGRB3O60242 1522 aa16.55■□□□□ 0.24
LINC00959-201ENST00000456581 MLECQ14165 292 aa16.55■□□□□ 0.24
LINC00959-201ENST00000456581 CAMSAP1Q5T5Y3 1602 aa16.54■□□□□ 0.24
LINC00959-201ENST00000456581 MYOM2P54296 1465 aa16.54■□□□□ 0.24
LINC00959-201ENST00000456581 NLRP13Q86W25 1043 aa16.54■□□□□ 0.24
LINC00959-201ENST00000456581 IFT172Q9UG01 1749 aa16.53■□□□□ 0.24
LINC00959-201ENST00000456581 BRD4O60885 1362 aaPredicted RBP16.53■□□□□ 0.24
LINC00959-201ENST00000456581 SYNMO15061 1565 aa16.52■□□□□ 0.24
LINC00959-201ENST00000456581 ZMYM4Q5VZL5 1548 aa16.52■□□□□ 0.24
LINC00959-201ENST00000456581 RRP1P56182 461 aaKnown RBP16.51■□□□□ 0.23
LINC00959-201ENST00000456581 KNSTRNQ9Y448 316 aa16.51■□□□□ 0.23
LINC00959-201ENST00000456581 LAS1LQ9Y4W2 734 aaKnown RBP16.51■□□□□ 0.23
LINC00959-201ENST00000456581 LRPPRCP42704 1394 aaKnown RBP16.51■□□□□ 0.23
LINC00959-201ENST00000456581 IPO9Q96P70 1041 aaKnown RBP16.51■□□□□ 0.23
LINC00959-201ENST00000456581 EIF3AQ14152 1382 aaKnown RBP16.5■□□□□ 0.23
LINC00959-201ENST00000456581 TRHP20396 242 aaPredicted RBP16.5■□□□□ 0.23
LINC00959-201ENST00000456581 NEURL4Q96JN8 1562 aa16.5■□□□□ 0.23
LINC00959-201ENST00000456581 C14orf93Q9H972 538 aaKnown RBP16.5■□□□□ 0.23
LINC00959-201ENST00000456581 NRXN1Q9ULB1 1477 aa16.49■□□□□ 0.23
LINC00959-201ENST00000456581 ANP32AP39687 249 aaKnown RBP16.49■□□□□ 0.23
LINC00959-201ENST00000456581 AMER1Q5JTC6 1135 aaPredicted RBP16.49■□□□□ 0.23
LINC00959-201ENST00000456581 RCAN3Q9UKA8 241 aa16.49■□□□□ 0.23
LINC00959-201ENST00000456581 SAFB2Q14151 953 aaKnown RBP eCLIP16.49■□□□□ 0.23
LINC00959-201ENST00000456581 PPLO60437 1756 aa16.49■□□□□ 0.23
LINC00959-201ENST00000456581 PIK3C2GO75747 1445 aa16.48■□□□□ 0.23
LINC00959-201ENST00000456581 KIAA1210Q9ULL0 1709 aa16.48■□□□□ 0.23
LINC00959-201ENST00000456581 ERVK-7P63135 1459 aa16.48■□□□□ 0.23
LINC00959-201ENST00000456581 CDCA8Q53HL2 280 aa16.46■□□□□ 0.23
LINC00959-201ENST00000456581 ZBTB47Q9UFB7 747 aaPredicted RBP16.46■□□□□ 0.23
LINC00959-201ENST00000456581 CARD14Q9BXL6 1004 aa16.46■□□□□ 0.23
LINC00959-201ENST00000456581 RTN4Q9NQC3 1192 aaKnown RBP16.46■□□□□ 0.23
LINC00959-201ENST00000456581 CENPJQ9HC77 1338 aaPredicted RBP16.46■□□□□ 0.23
LINC00959-201ENST00000456581 STK26Q9P289 416 aa16.46■□□□□ 0.22
LINC00959-201ENST00000456581 MYO5BQ9ULV0 1848 aa16.45■□□□□ 0.22
LINC00959-201ENST00000456581 MYOM1P52179 1685 aa16.45■□□□□ 0.22
LINC00959-201ENST00000456581 IL27Q8NEV9 243 aa16.44■□□□□ 0.22
LINC00959-201ENST00000456581 REREQ9P2R6 1566 aa16.44■□□□□ 0.22
LINC00959-201ENST00000456581 PPP2R1AP30153 589 aa16.44■□□□□ 0.22
LINC00959-201ENST00000456581 PIK3C2BO00750 1634 aa16.43■□□□□ 0.22
LINC00959-201ENST00000456581 SLC12A5Q9H2X9 1139 aa16.43■□□□□ 0.22
LINC00959-201ENST00000456581 ARHGAP31Q2M1Z3 1444 aa16.43■□□□□ 0.22
LINC00959-201ENST00000456581 ADGRB1O14514 1584 aa16.43■□□□□ 0.22
LINC00959-201ENST00000456581 VGFO15240 615 aaPredicted RBP16.42■□□□□ 0.22
LINC00959-201ENST00000456581 RPGRIP1LQ68CZ1 1315 aa16.42■□□□□ 0.22
LINC00959-201ENST00000456581 NEXMIFQ5QGS0 1516 aa16.42■□□□□ 0.22
LINC00959-201ENST00000456581 SLC4A3P48751 1232 aa16.41■□□□□ 0.22
LINC00959-201ENST00000456581 C20orf194Q5TEA3 1177 aa16.41■□□□□ 0.22
LINC00959-201ENST00000456581 SLC52A1Q9NWF4 448 aa16.41■□□□□ 0.22
LINC00959-201ENST00000456581 ADAMTS8Q9UP79 889 aa16.41■□□□□ 0.22
LINC00959-201ENST00000456581 KDM5AP29375 1690 aaKnown RBP16.41■□□□□ 0.22
LINC00959-201ENST00000456581 PREX1Q8TCU6 1659 aa16.4■□□□□ 0.22
LINC00959-201ENST00000456581 PDE4AP27815 886 aa16.4■□□□□ 0.22
LINC00959-201ENST00000456581 STAG3Q9UJ98 1225 aa16.39■□□□□ 0.21
LINC00959-201ENST00000456581 CRBNQ96SW2 442 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms