RNA–Protein interactions for RNA: ENST00000456331.6

PPP1R9A-208, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 10,090 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-208ENST00000456331 DDX49Q9Y6V7 483 aaKnown RBP4.88□□□□□ -1.63
PPP1R9A-208ENST00000456331 IQCEQ6IPM2 695 aa4.88□□□□□ -1.63
PPP1R9A-208ENST00000456331 TSPYL1Q9H0U9 437 aa4.88□□□□□ -1.63
PPP1R9A-208ENST00000456331 EVC2Q86UK5 1308 aa4.88□□□□□ -1.63
PPP1R9A-208ENST00000456331 RAB3GAP2Q9H2M9 1393 aa4.88□□□□□ -1.63
PPP1R9A-208ENST00000456331 MRE11P49959 708 aa4.88□□□□□ -1.63
PPP1R9A-208ENST00000456331 TRDNQ13061 729 aa4.88□□□□□ -1.63
PPP1R9A-208ENST00000456331 SAFBQ15424 915 aaKnown RBP eCLIP4.88□□□□□ -1.63
PPP1R9A-208ENST00000456331 VGFO15240 615 aaPredicted RBP4.88□□□□□ -1.63
PPP1R9A-208ENST00000456331 MARCH6O60337 910 aa4.88□□□□□ -1.63
PPP1R9A-208ENST00000456331 DNAJC5BQ9UF47 199 aa4.88□□□□□ -1.63
PPP1R9A-208ENST00000456331 SMARCE1Q969G3 411 aa4.87□□□□□ -1.63
PPP1R9A-208ENST00000456331 SASS6Q6UVJ0 657 aa4.87□□□□□ -1.63
PPP1R9A-208ENST00000456331 ERICH2A1L162 156 aa4.87□□□□□ -1.63
PPP1R9A-208ENST00000456331 DHX16O60231 1041 aaKnown RBP4.87□□□□□ -1.63
PPP1R9A-208ENST00000456331 DACH1Q9UI36 760 aa4.87□□□□□ -1.63
PPP1R9A-208ENST00000456331 ERLIN2O94905 339 aa4.87□□□□□ -1.63
PPP1R9A-208ENST00000456331 ZNF428Q96B54 188 aa4.87□□□□□ -1.63
PPP1R9A-208ENST00000456331 TCEAL9Q9UHQ7 104 aa4.87□□□□□ -1.63
PPP1R9A-208ENST00000456331 PKD2Q13563 968 aa4.87□□□□□ -1.63
PPP1R9A-208ENST00000456331 CWC22Q9HCG8 908 aaKnown RBP4.87□□□□□ -1.63
PPP1R9A-208ENST00000456331 INCENPQ9NQS7 918 aa4.86□□□□□ -1.63
PPP1R9A-208ENST00000456331 KIF2AO00139 706 aaPredicted RBP4.86□□□□□ -1.63
PPP1R9A-208ENST00000456331 OLFM4Q6UX06 510 aa4.86□□□□□ -1.63
PPP1R9A-208ENST00000456331 ZNF771Q7L3S4 317 aaPredicted RBP4.86□□□□□ -1.63
PPP1R9A-208ENST00000456331 FAM43AQ8N2R8 423 aa4.86□□□□□ -1.63
PPP1R9A-208ENST00000456331 MCM3P25205 808 aa4.86□□□□□ -1.63
PPP1R9A-208ENST00000456331 G3V3G9 751 aa4.86□□□□□ -1.63
PPP1R9A-208ENST00000456331 DCAF8Q5TAQ9 597 aa4.86□□□□□ -1.63
PPP1R9A-208ENST00000456331 ANKRD1Q15327 319 aa4.86□□□□□ -1.63
PPP1R9A-208ENST00000456331 JMYQ8N9B5 988 aa4.86□□□□□ -1.63
PPP1R9A-208ENST00000456331 EIF3JO75822 258 aaKnown RBP4.85□□□□□ -1.63
PPP1R9A-208ENST00000456331 DNAI2Q9GZS0 605 aa4.85□□□□□ -1.63
PPP1R9A-208ENST00000456331 CCDC73Q6ZRK6 1079 aa4.85□□□□□ -1.63
PPP1R9A-208ENST00000456331 FAM107BQ9H098 131 aa4.85□□□□□ -1.63
PPP1R9A-208ENST00000456331 KIF21BO75037 1637 aa4.85□□□□□ -1.63
PPP1R9A-208ENST00000456331 MYOM3Q5VTT5 1437 aa4.85□□□□□ -1.63
PPP1R9A-208ENST00000456331 POLR3GO15318 223 aaPredicted RBP4.85□□□□□ -1.63
PPP1R9A-208ENST00000456331 MNS1Q8NEH6 495 aa4.85□□□□□ -1.63
PPP1R9A-208ENST00000456331 SOGA1O94964 1423 aa4.85□□□□□ -1.63
PPP1R9A-208ENST00000456331 PRKCSHP14314 528 aaPredicted RBP4.85□□□□□ -1.63
PPP1R9A-208ENST00000456331 RRBP1Q9P2E9 1410 aaKnown RBP4.85□□□□□ -1.63
PPP1R9A-208ENST00000456331 HMGB1P1B2RPK0 211 aaPredicted RBP4.85□□□□□ -1.63
PPP1R9A-208ENST00000456331 FILIP1LQ4L180 1135 aa4.85□□□□□ -1.63
PPP1R9A-208ENST00000456331 CPLX1O14810 134 aa4.84□□□□□ -1.63
PPP1R9A-208ENST00000456331 ERC1Q8IUD2 1116 aa4.84□□□□□ -1.63
PPP1R9A-208ENST00000456331 RRP1P56182 461 aaKnown RBP4.84□□□□□ -1.63
PPP1R9A-208ENST00000456331 C1orf141Q5JVX7 400 aa4.84□□□□□ -1.63
PPP1R9A-208ENST00000456331 LEKR1Q6ZMV7 388 aa4.84□□□□□ -1.63
PPP1R9A-208ENST00000456331 HOMER1Q86YM7 354 aa4.84□□□□□ -1.63
PPP1R9A-208ENST00000456331 PLEKHH2Q8IVE3 1493 aa4.84□□□□□ -1.63
PPP1R9A-208ENST00000456331 ERLIN1O75477 346 aa4.84□□□□□ -1.63
PPP1R9A-208ENST00000456331 GNAI1P63096 354 aa4.84□□□□□ -1.63
PPP1R9A-208ENST00000456331 BRD4O60885 1362 aaPredicted RBP4.84□□□□□ -1.63
PPP1R9A-208ENST00000456331 PEG3Q9GZU2 1588 aa4.84□□□□□ -1.63
PPP1R9A-208ENST00000456331 TXLNAP40222 546 aa4.84□□□□□ -1.63
PPP1R9A-208ENST00000456331 ODF2Q5BJF6 829 aa4.84□□□□□ -1.63
PPP1R9A-208ENST00000456331 LMOD2Q6P5Q4 547 aa4.84□□□□□ -1.63
PPP1R9A-208ENST00000456331 DESP17661 470 aa4.84□□□□□ -1.63
PPP1R9A-208ENST00000456331 PDE4AP27815 886 aa4.84□□□□□ -1.63
PPP1R9A-208ENST00000456331 AEBP1Q8IUX7 1158 aa4.84□□□□□ -1.63
PPP1R9A-208ENST00000456331 SART3Q15020 963 aaKnown RBP4.84□□□□□ -1.64
PPP1R9A-208ENST00000456331 FEZ1Q99689 392 aa4.84□□□□□ -1.64
PPP1R9A-208ENST00000456331 DEF6Q9H4E7 631 aa4.84□□□□□ -1.64
PPP1R9A-208ENST00000456331 AMPHP49418 695 aa4.84□□□□□ -1.64
PPP1R9A-208ENST00000456331 TRIM34Q9BYJ4 488 aa4.84□□□□□ -1.64
PPP1R9A-208ENST00000456331 GBP3Q9H0R5 595 aa4.84□□□□□ -1.64
PPP1R9A-208ENST00000456331 GOLGA6L10A6NI86 522 aa4.83□□□□□ -1.64
PPP1R9A-208ENST00000456331 TULP1O00294 542 aaPredicted RBP4.83□□□□□ -1.64
PPP1R9A-208ENST00000456331 SLKQ9H2G2 1235 aaPredicted RBP4.83□□□□□ -1.64
PPP1R9A-208ENST00000456331 CIZ1Q9ULV3 898 aaPredicted RBP4.83□□□□□ -1.64
PPP1R9A-208ENST00000456331 ZNF396Q96N95 335 aaPredicted RBP4.83□□□□□ -1.64
PPP1R9A-208ENST00000456331 SLC3A2P08195 630 aaKnown RBP4.83□□□□□ -1.64
PPP1R9A-208ENST00000456331 COG3Q96JB2 828 aa4.83□□□□□ -1.64
PPP1R9A-208ENST00000456331 SIN3AQ96ST3 1273 aa4.83□□□□□ -1.64
PPP1R9A-208ENST00000456331 CBFA2T2O43439 604 aa4.83□□□□□ -1.64
PPP1R9A-208ENST00000456331 DAPK1P53355 1430 aa4.83□□□□□ -1.64
PPP1R9A-208ENST00000456331 CCDC88BA6NC98 1476 aa4.83□□□□□ -1.64
PPP1R9A-208ENST00000456331 FYCO1Q9BQS8 1478 aa4.83□□□□□ -1.64
PPP1R9A-208ENST00000456331 TRIM21P19474 475 aaKnown RBP4.83□□□□□ -1.64
PPP1R9A-208ENST00000456331 TUBB4BP68371 445 aa4.83□□□□□ -1.64
PPP1R9A-208ENST00000456331 HIRIP3Q9BW71 556 aaPredicted RBP4.83□□□□□ -1.64
PPP1R9A-208ENST00000456331 PRM3Q9NNZ6 103 aa4.83□□□□□ -1.64
PPP1R9A-208ENST00000456331 SMC3Q9UQE7 1217 aa4.83□□□□□ -1.64
PPP1R9A-208ENST00000456331 PES1O00541 588 aaKnown RBP4.83□□□□□ -1.64
PPP1R9A-208ENST00000456331 CSB-PGBD3P0DP91 1061 aa4.83□□□□□ -1.64
PPP1R9A-208ENST00000456331 GCC1Q96CN9 775 aa4.83□□□□□ -1.64
PPP1R9A-208ENST00000456331 SRCIN1Q9C0H9 1055 aa4.83□□□□□ -1.64
PPP1R9A-208ENST00000456331 ERICH3Q5RHP9 1530 aa4.82□□□□□ -1.64
PPP1R9A-208ENST00000456331 WWC2Q6AWC2 1192 aa4.82□□□□□ -1.64
PPP1R9A-208ENST00000456331 EFCAB5A4FU69 1503 aa4.82□□□□□ -1.64
PPP1R9A-208ENST00000456331 DHX29Q7Z478 1369 aaKnown RBP4.82□□□□□ -1.64
PPP1R9A-208ENST00000456331 RUNDC1Q96C34 613 aa4.82□□□□□ -1.64
PPP1R9A-208ENST00000456331 CTDP1Q9Y5B0 961 aaPredicted RBP4.82□□□□□ -1.64
PPP1R9A-208ENST00000456331 NF2P35240 595 aa4.82□□□□□ -1.64
PPP1R9A-208ENST00000456331 CCDC43Q96MW1 224 aaKnown RBP4.82□□□□□ -1.64
PPP1R9A-208ENST00000456331 ZNHIT6Q9NWK9 470 aaKnown RBP4.82□□□□□ -1.64
PPP1R9A-208ENST00000456331 HFM1A2PYH4 1435 aa4.82□□□□□ -1.64
PPP1R9A-208ENST00000456331 PLEKHH1Q9ULM0 1364 aa4.82□□□□□ -1.64
PPP1R9A-208ENST00000456331 FRAT2O75474 233 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms