RNA–Protein interactions for RNA: ENST00000456257.1

ERCC3-204, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-204ENST00000456257 SPATA31D1Q6ZQQ2 1576 aa10.49□□□□□ -0.73
ERCC3-204ENST00000456257 UGGT1Q9NYU2 1555 aa10.49□□□□□ -0.73
ERCC3-204ENST00000456257 ST20-MTHFSA0A0A6YYL1 179 aa10.49□□□□□ -0.73
ERCC3-204ENST00000456257 VGFO15240 615 aaPredicted RBP10.49□□□□□ -0.73
ERCC3-204ENST00000456257 SLC24A1O60721 1099 aa10.49□□□□□ -0.73
ERCC3-204ENST00000456257 TRHP20396 242 aaPredicted RBP10.49□□□□□ -0.73
ERCC3-204ENST00000456257 KIF7Q2M1P5 1343 aa10.49□□□□□ -0.73
ERCC3-204ENST00000456257 KIAA1210Q9ULL0 1709 aa10.48□□□□□ -0.73
ERCC3-204ENST00000456257 MADDQ8WXG6 1647 aa10.47□□□□□ -0.73
ERCC3-204ENST00000456257 ZNF326Q5BKZ1 582 aaKnown RBP10.47□□□□□ -0.73
ERCC3-204ENST00000456257 PIK3C2GO75747 1445 aa10.46□□□□□ -0.74
ERCC3-204ENST00000456257 IFT172Q9UG01 1749 aa10.46□□□□□ -0.74
ERCC3-204ENST00000456257 KIF1BO60333 1816 aa10.46□□□□□ -0.74
ERCC3-204ENST00000456257 PREX1Q8TCU6 1659 aa10.45□□□□□ -0.74
ERCC3-204ENST00000456257 TMEM131LA2VDJ0 1609 aa10.45□□□□□ -0.74
ERCC3-204ENST00000456257 CCER2I3L3R5 266 aa10.45□□□□□ -0.74
ERCC3-204ENST00000456257 CFAP70Q5T0N1 1121 aa10.45□□□□□ -0.74
ERCC3-204ENST00000456257 SETBP1Q9Y6X0 1596 aa10.44□□□□□ -0.74
ERCC3-204ENST00000456257 SCAF11Q99590 1463 aaKnown RBP10.44□□□□□ -0.74
ERCC3-204ENST00000456257 NEXMIFQ5QGS0 1516 aa10.43□□□□□ -0.74
ERCC3-204ENST00000456257 SBNO2Q9Y2G9 1366 aa10.43□□□□□ -0.74
ERCC3-204ENST00000456257 PUS7Q96PZ0 661 aaKnown RBP10.43□□□□□ -0.74
ERCC3-204ENST00000456257 A2ML1A8K2U0 1454 aa10.42□□□□□ -0.74
ERCC3-204ENST00000456257 MROH2AA6NES4 1674 aa10.42□□□□□ -0.74
ERCC3-204ENST00000456257 ADGRB1O14514 1584 aa10.41□□□□□ -0.74
ERCC3-204ENST00000456257 MLECQ14165 292 aa10.41□□□□□ -0.74
ERCC3-204ENST00000456257 ESF1Q9H501 851 aaKnown RBP10.41□□□□□ -0.74
ERCC3-204ENST00000456257 PPLO60437 1756 aa10.41□□□□□ -0.74
ERCC3-204ENST00000456257 POLR1AO95602 1720 aaPredicted RBP10.41□□□□□ -0.74
ERCC3-204ENST00000456257 CLTCQ00610 1675 aaKnown RBP10.41□□□□□ -0.74
ERCC3-204ENST00000456257 CFAP65Q6ZU64 1925 aaKnown RBP10.41□□□□□ -0.74
ERCC3-204ENST00000456257 TNRQ92752 1358 aa10.4□□□□□ -0.74
ERCC3-204ENST00000456257 PER1O15534 1290 aaPredicted RBP10.4□□□□□ -0.74
ERCC3-204ENST00000456257 CHGAP10645 457 aaKnown RBP10.4□□□□□ -0.74
ERCC3-204ENST00000456257 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.4□□□□□ -0.74
ERCC3-204ENST00000456257 KDM5AP29375 1690 aaKnown RBP10.4□□□□□ -0.74
ERCC3-204ENST00000456257 IQGAP1P46940 1657 aa10.39□□□□□ -0.75
ERCC3-204ENST00000456257 ANP32CO43423 234 aa10.39□□□□□ -0.75
ERCC3-204ENST00000456257 HDGFP51858 240 aaKnown RBP10.39□□□□□ -0.75
ERCC3-204ENST00000456257 TMF1P82094 1093 aa10.39□□□□□ -0.75
ERCC3-204ENST00000456257 CDCA8Q53HL2 280 aa10.39□□□□□ -0.75
ERCC3-204ENST00000456257 SIRT1Q96EB6 747 aa10.39□□□□□ -0.75
ERCC3-204ENST00000456257 NLRP1Q9C000 1473 aa10.38□□□□□ -0.75
ERCC3-204ENST00000456257 EIF3AQ14152 1382 aaKnown RBP10.38□□□□□ -0.75
ERCC3-204ENST00000456257 PRKRIP1Q9H875 184 aaPredicted RBP10.37□□□□□ -0.75
ERCC3-204ENST00000456257 RIMS2Q9UQ26 1411 aa10.36□□□□□ -0.75
ERCC3-204ENST00000456257 DISP3Q9P2K9 1392 aa10.36□□□□□ -0.75
ERCC3-204ENST00000456257 TMEM2Q9UHN6 1383 aa10.36□□□□□ -0.75
ERCC3-204ENST00000456257 KTN1Q86UP2 1357 aaKnown RBP10.35□□□□□ -0.75
ERCC3-204ENST00000456257 MYO3AQ8NEV4 1616 aa10.34□□□□□ -0.75
ERCC3-204ENST00000456257 TMEM132EQ6IEE7 984 aa10.34□□□□□ -0.75
ERCC3-204ENST00000456257 ABCC11Q96J66 1382 aa10.34□□□□□ -0.75
ERCC3-204ENST00000456257 CENPJQ9HC77 1338 aaPredicted RBP10.33□□□□□ -0.76
ERCC3-204ENST00000456257 CEBPAP49715 358 aaPredicted RBP10.33□□□□□ -0.76
ERCC3-204ENST00000456257 STAG3Q9UJ98 1225 aa10.33□□□□□ -0.76
ERCC3-204ENST00000456257 NPC1L1Q9UHC9 1359 aa10.33□□□□□ -0.76
ERCC3-204ENST00000456257 MED14O60244 1454 aa10.33□□□□□ -0.76
ERCC3-204ENST00000456257 ARHGAP23Q9P227 1491 aa10.33□□□□□ -0.76
ERCC3-204ENST00000456257 ALKQ9UM73 1620 aa10.33□□□□□ -0.76
ERCC3-204ENST00000456257 LRPPRCP42704 1394 aaKnown RBP10.32□□□□□ -0.76
ERCC3-204ENST00000456257 THEMISQ8N1K5 641 aaPredicted RBP10.32□□□□□ -0.76
ERCC3-204ENST00000456257 SLIT1O75093 1534 aa10.32□□□□□ -0.76
ERCC3-204ENST00000456257 RALBP1Q15311 655 aa10.31□□□□□ -0.76
ERCC3-204ENST00000456257 ASXL1Q8IXJ9 1541 aa10.31□□□□□ -0.76
ERCC3-204ENST00000456257 ADAMTSL3P82987 1691 aa10.31□□□□□ -0.76
ERCC3-204ENST00000456257 PTPRMP28827 1452 aa10.3□□□□□ -0.76
ERCC3-204ENST00000456257 PLEKHG1Q9ULL1 1385 aa10.3□□□□□ -0.76
ERCC3-204ENST00000456257 DLC1Q96QB1 1528 aa10.3□□□□□ -0.76
ERCC3-204ENST00000456257 LTKP29376 864 aa10.3□□□□□ -0.76
ERCC3-204ENST00000456257 NUTM2DQ5VT03 806 aaPredicted RBP10.3□□□□□ -0.76
ERCC3-204ENST00000456257 TRAK1Q9UPV9 953 aa10.3□□□□□ -0.76
ERCC3-204ENST00000456257 TBX22Q9Y458 520 aa10.3□□□□□ -0.76
ERCC3-204ENST00000456257 YTHDC2Q9H6S0 1430 aaKnown RBP10.3□□□□□ -0.76
ERCC3-204ENST00000456257 MYO5BQ9ULV0 1848 aa10.3□□□□□ -0.76
ERCC3-204ENST00000456257 C3P01024 1663 aa10.29□□□□□ -0.76
ERCC3-204ENST00000456257 PANK3Q9H999 370 aa10.29□□□□□ -0.76
ERCC3-204ENST00000456257 TECPR2O15040 1411 aa10.29□□□□□ -0.76
ERCC3-204ENST00000456257 UBR1Q8IWV7 1749 aa10.28□□□□□ -0.76
ERCC3-204ENST00000456257 FAM135BQ49AJ0 1406 aa10.28□□□□□ -0.76
ERCC3-204ENST00000456257 AMER1Q5JTC6 1135 aaPredicted RBP10.28□□□□□ -0.76
ERCC3-204ENST00000456257 PARD3Q8TEW0 1356 aa10.27□□□□□ -0.76
ERCC3-204ENST00000456257 ADAMTS13Q76LX8 1427 aa10.27□□□□□ -0.77
ERCC3-204ENST00000456257 SETD1BQ9UPS6 1966 aaKnown RBP10.27□□□□□ -0.77
ERCC3-204ENST00000456257 TXNDC2Q86VQ3 553 aa10.27□□□□□ -0.77
ERCC3-204ENST00000456257 EVC2Q86UK5 1308 aa10.27□□□□□ -0.77
ERCC3-204ENST00000456257 NRXN3Q9Y4C0 1643 aa10.26□□□□□ -0.77
ERCC3-204ENST00000456257 CARD14Q9BXL6 1004 aa10.26□□□□□ -0.77
ERCC3-204ENST00000456257 EID1Q9Y6B2 187 aa10.26□□□□□ -0.77
ERCC3-204ENST00000456257 SETD1AO15047 1707 aaKnown RBP10.26□□□□□ -0.77
ERCC3-204ENST00000456257 METP08581 1390 aa10.26□□□□□ -0.77
ERCC3-204ENST00000456257 FER1L4A9Z1Z3 1794 aa10.25□□□□□ -0.77
ERCC3-204ENST00000456257 CENPBP07199 599 aaPredicted RBP10.25□□□□□ -0.77
ERCC3-204ENST00000456257 MAPK8IP2Q13387 824 aaPredicted RBP10.25□□□□□ -0.77
ERCC3-204ENST00000456257 CCDC184Q52MB2 194 aa10.25□□□□□ -0.77
ERCC3-204ENST00000456257 NINLQ9Y2I6 1382 aa10.25□□□□□ -0.77
ERCC3-204ENST00000456257 PRAM1Q96QH2 718 aa10.24□□□□□ -0.77
ERCC3-204ENST00000456257 BRD4O60885 1362 aaPredicted RBP10.24□□□□□ -0.77
ERCC3-204ENST00000456257 PIK3R4Q99570 1358 aa10.24□□□□□ -0.77
ERCC3-204ENST00000456257 PNISRQ8TF01 805 aaKnown RBP10.23□□□□□ -0.77
ERCC3-204ENST00000456257 ARHGEF28Q8N1W1 1705 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms